FFCP PHASE1:Hg19::chr1:202317815..202317854,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DPIdataset= | |DHSsupport=supported | ||
|DPIdataset=robust | |||
|EntrezGene=4660 | |EntrezGene=4660 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC=7619 | |HGNC=7619 | ||
|TSSclassifier= | |TSSclassifier=strong | ||
|UniProt=F8W8M3,O60237,Q2TAI8 | |UniProt=F8W8M3,O60237,Q2TAI8 | ||
|association_with_transcript=0bp_to_ENST00000336894,ENST00000406302,ENST00000480184,NM_001167857,NM_001167858,NM_002481,uc001gxy.2,uc001gxz.1,uc001gya.1,uc009xad.1,uc009xae.1_5end | |association_with_transcript=0bp_to_ENST00000336894,ENST00000406302,ENST00000480184,NM_001167857,NM_001167858,NM_002481,uc001gxy.2,uc001gxz.1,uc001gya.1,uc009xad.1,uc009xae.1_5end | ||
|cluster_id=chr1:202317815..202317854,+ | |||
|coexpression_cluster_id=C1377 | |coexpression_cluster_id=C1377 | ||
|description=CAGE_peak_1_at_PPP1R12B_5end | |description=CAGE_peak_1_at_PPP1R12B_5end | ||
Latest revision as of 20:24, 19 September 2015
| Short description: | p1@PPP1R12B |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_1_at_PPP1R12B_5end |
| Coexpression cluster: | C1377_skeletal_cerebellum_corpus_thalamus_heart_occipital_parietal |
| Association with transcript: | 0bp_to_ENST00000336894, ENST00000406302, ENST00000480184, NM_001167857, NM_001167858, NM_002481, uc001gxy.2, uc001gxz.1, uc001gya.1, uc009xad.1, uc009xae.1_5end |
| EntrezGene: | PPP1R12B |
| HGNC: | 7619 |
| UniProt: | F8W8M3O60237Q2TAI8 |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p1@PPP1R12B |
|---|
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| adult organism | 5.18e-44 | 114 |
| neural tube | 2.08e-27 | 56 |
| neural rod | 2.08e-27 | 56 |
| future spinal cord | 2.08e-27 | 56 |
| neural keel | 2.08e-27 | 56 |
| regional part of nervous system | 9.93e-26 | 53 |
| regional part of brain | 9.93e-26 | 53 |
| central nervous system | 2.15e-25 | 81 |
| nervous system | 3.23e-25 | 89 |
| brain | 3.63e-24 | 68 |
Showing 1 to 10 of 41 entries
