FFCP PHASE1:Hg19::chr9:102584262..102584276,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8013 | |EntrezGene=8013 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7982 | |HGNC=7982 | ||
|TSSclassifier=strong | |||
|UniProt=E9PBS2 | |UniProt=E9PBS2 | ||
|association_with_transcript=107bp_to_ENST00000395096_5end | |association_with_transcript=107bp_to_ENST00000395096_5end | ||
|cluster_id=chr9:102584262..102584276,+ | |||
|coexpression_cluster_id=C1466 | |coexpression_cluster_id=C1466 | ||
|description=CAGE_peak_1_at_NR4A3_5end | |description=CAGE_peak_1_at_NR4A3_5end | ||
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|ontology_enrichment_celltype=CL:0000766!1.05e-22!76;CL:0000860!5.10e-21!45;CL:0002057!1.25e-20!42;CL:0000738!4.60e-20!140;CL:0000557!1.01e-19!71;CL:0002009!8.17e-18!65;CL:0002194!1.29e-16!63;CL:0000576!1.29e-16!63;CL:0000040!1.29e-16!63;CL:0000559!1.29e-16!63;CL:0000839!1.74e-16!70;CL:0002031!1.94e-12!124;CL:0002087!5.68e-12!119;CL:0000763!3.29e-09!112;CL:0000049!3.29e-09!112;CL:0000037!6.17e-09!172;CL:0000566!6.17e-09!172;CL:0000451!1.99e-08!10;CL:0002032!1.98e-07!165;CL:0000837!1.98e-07!165;CL:0000990!2.58e-07!8;CL:0000988!3.49e-07!182 | |ontology_enrichment_celltype=CL:0000766!1.05e-22!76;CL:0000860!5.10e-21!45;CL:0002057!1.25e-20!42;CL:0000738!4.60e-20!140;CL:0000557!1.01e-19!71;CL:0002009!8.17e-18!65;CL:0002194!1.29e-16!63;CL:0000576!1.29e-16!63;CL:0000040!1.29e-16!63;CL:0000559!1.29e-16!63;CL:0000839!1.74e-16!70;CL:0002031!1.94e-12!124;CL:0002087!5.68e-12!119;CL:0000763!3.29e-09!112;CL:0000049!3.29e-09!112;CL:0000037!6.17e-09!172;CL:0000566!6.17e-09!172;CL:0000451!1.99e-08!10;CL:0002032!1.98e-07!165;CL:0000837!1.98e-07!165;CL:0000990!2.58e-07!8;CL:0000988!3.49e-07!182 | ||
|ontology_enrichment_celltype_v019=CL:0000860;4.55e-17;33!CL:0002057;4.55e-17;33!CL:0000473;5.67e-14;39!CL:0000234;5.67e-14;39!CL:0000766;9.42e-11;69!CL:0000576;1.16e-10;48!CL:0000451;3.86e-09;10!CL:0000990;6.57e-08;8!CL:0000094;4.39e-07;8 | |ontology_enrichment_celltype_v019=CL:0000860;4.55e-17;33!CL:0002057;4.55e-17;33!CL:0000473;5.67e-14;39!CL:0000234;5.67e-14;39!CL:0000766;9.42e-11;69!CL:0000576;1.16e-10;48!CL:0000451;3.86e-09;10!CL:0000990;6.57e-08;8!CL:0000094;4.39e-07;8 | ||
|ontology_enrichment_celltype_v019_2=CL:0000766,1.53e-24,72;CL:0000860,1.43e-22,42;CL:0002057,1.43e-22,42;CL:0000473,4.92e-22,48;CL:0000234,4.92e-22,48;CL:0000557,3.12e-21,67;CL:0000738,2.15e-20,136;CL:0002009,3.49e-19,61;CL:0000839,5.49e-18,66;CL:0002194,7.48e-18,59;CL:0000576,7.48e-18,59;CL:0000040,7.48e-18,59;CL:0000559,7.48e-18,59;CL:0002031,1.35e-12,120;CL:0002087,5.31e-12,115;CL:0000763,8.87e-12,108;CL:0000049,8.87e-12,108;CL:0000037,1.96e-10,168;CL:0000451,3.98e-09,10;CL:0002032,7.09e-09,161;CL:0000837,7.09e-09,161;CL:0000988,1.14e-08,177;CL:0000990,6.68e-08,8;CL:0000094,4.45e-07,8 | |||
|ontology_enrichment_development_v019=CL:0002057;1.85e-16;42 | |ontology_enrichment_development_v019=CL:0002057;1.85e-16;42 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!2.03e-17!80;UBERON:0001474!1.35e-16!86;UBERON:0004765!1.72e-16!101;UBERON:0001434!1.72e-16!101;UBERON:0002390!1.83e-15!102;UBERON:0003061!1.83e-15!102;UBERON:0002193!2.21e-11!112;UBERON:0007023!1.13e-09!115;UBERON:0002405!2.58e-09!115;UBERON:0000062!3.86e-07!511 | |ontology_enrichment_uberon=UBERON:0002371!2.03e-17!80;UBERON:0001474!1.35e-16!86;UBERON:0004765!1.72e-16!101;UBERON:0001434!1.72e-16!101;UBERON:0002390!1.83e-15!102;UBERON:0003061!1.83e-15!102;UBERON:0002193!2.21e-11!112;UBERON:0007023!1.13e-09!115;UBERON:0002405!2.58e-09!115;UBERON:0000062!3.86e-07!511 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.45e-19,76;UBERON:0001474,1.76e-18,82;UBERON:0001434,1.53e-17,100;UBERON:0002390,2.01e-16,98;UBERON:0003061,2.01e-16,98;UBERON:0004765,1.23e-15,90;UBERON:0002405,4.21e-15,93;UBERON:0002193,6.52e-13,108;UBERON:0007023,1.35e-10,114 | |||
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|phase1_expression=1.09007027562334,2.99740733447376,1.55049844505568,3.00219895059391,1.34088328328186,0,12.6649939084155,1.89515962028049,3.13422753839806,0,0,0,0,1.60896258848061,4.63956326019082,1.34465029290355,1.20538905604795,0.730310090387373,0,0.123121058076788,0,0.313454721478088,0.286235987131057,0,0.125542639594803,1.06978768047132,0.903106483949403,0.472264687882075,139.644318281361,81.7556617947063,60.5331042165857,0,0,0,0,0.142169232487422,3.81680571135301,48.1976005422733,84.6297568323998,55.3377720325422,0.223915474239924,0,0,4.50734540216651,10.9584023669755,7.76268995801012,59.7342624847609,59.6193437631647,75.5683544984053,50.0584762640542,24.5914278267937,24.8306341383014,357.84601660461,238.829332926016,211.265319087173,68.3319692539655,52.6708869611642,45.169420373462,414.437590270202,334.40804621329,493.56826111686,4.28806690242731,6.98122801675712,3.83602275479425,115.213067735548,101.561955219714,119.58187180715,62.5609176489291,45.3690139025575,38.6596143575108,102.917915447673,142.1551674912,90.5082428080929,21.9705497764419,25.5125159958052,12.9988360215193,31.6766739833116,14.1166279271016,11.4115166554927,15.9607136495099,10.5425838915518,4.74926799788048,0,0,0,0.426730222566507,0,0,1.98313461835459,0.954053754535364,55.2136580036165,111.575065980478,100.15558576881,48.9033915742396,73.4266217505812,0.526768169550154,65.8977729881341,131.265594758221,203.339882510515,0,32.9181489299926,17.9910166179199,13.6378709885538,1.44833593950726,49.1991865482978,19.0519149341914,19.7686820548461,0.25618263945135,0.260118695119756,0.164437904603676,0.276350017785848,0,29.50902606925,7.49114318651197,20.9071047609954,0,54.0340895978709,28.1774505295757,30.1093433503208,0.637130828648193,0,0,0.752875595388864,0.127986611154418,0,0.236777252044017,0,110.077281800704,204.3243095786,97.9012970247721,2.43806866313962,0,0.255725123687061,0,2.00535164254356,14.4846518960824,0,5.35298357332899,0.378139268656271,0.665188192387692,1.40535657109002,2.88153966094968,0,0,97.0396707027503,137.73662220372,96.5274793366961,101.835496578381,62.3474452750339,70.5769252526173,0,0,0,0,0,0,0.208994966536811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,326.815435241437,395.535869431292,0,5.4666914686485,0.25326102332916,1.05927344650575,15.2023408996871,1.41867352879343,0,0,0,0.311211035399766,0,0,0.151357427644931,0.576175924479999,0,0.936480230490962,0,2.54062756938062,0,0.323745888736263,0,7.75785850768594,20.5133309910652,19.9418757669227,8.31602000097437,25.2212267864128,0,0,5.55509176048418,10.509955669245,8.31192346452549,1.75591048352335,1.83892677479412,38.3107050211822,0.907457465280168,6.27863724911017,1.70845911054854,4.87443372666992,0.900273288253207,0.824420233907511,6.44101350114073,0.558350568994769,0.675105328965065,1.16924406193438,5.55354303337052,4.51044503347267,1.93975268182574,12.7803453305981,0.403008392910561,1.52604533079439,0,0,0,0.243947412259191,0.132529768321485,0.116193942869518,0.932949495138334,0,0,0,0.643240938192885,0,4.64367928031979,0,4.73227200159376,6.57480291304597,5.3022426574366,5.62499260935209,4.35758888184812,3.79632990577755,12.9438055833758,13.7355025587742,13.4661504931237,0,0,0,1.47008711385542,0,0,3.54473944008842,0.882926198829301,0,0.686271241194102,0,0,0,0,0.651616610620649,14.5590869939141,0,0.115930404975077,0.352226082707465,0,0,0,0.790204397959275,0.858486162094873,0.492434012174795,6.08411089362018,2.37809859661965,0,0,0,0.179117045405697,0,0,480.346656948545,0.088048434013226,64.4790439331801,34.3005489132368,35.3478813593864,42.2895975985846,59.208205961533,29.3043618025117,23.9501424431787,22.8277033801378,45.3518017344315,37.4432626746057,0,0,0.22001485746285,2.71470603091333,0,0,0.26593811658487,0,0,0,0,8.00676764485626,0,0,0,2.84313558994037,0,0,0,1.79951384127703,8.51366464488333,3.51579964002488,10.5416969741516,0,0,0,0.144781306667579,0,0.179060963239896,1.00876629594175,75.856842677742,122.907717669925,76.2357635501705,0.508189248444927,16.9181810014908,3.86644406388848,4.69045542936177,2.55175500661265,62.9165900115633,137.614271233851,130.540886732351,0.613457458595699,0.500170521059677,1.08506009479894,7.27898015357825,15.5233220253531,6.62350143142526,3.63138386477411,0,0,1.03473071292505,0.664225598535437,0.737476674166813,0.434418072340414,0.391602314925481,0,37.8385487804884,90.8156785446377,123.163601705175,1.5156378572313,0,0,0.992431231275107,3.6830873589135,0.561320188866147,0.896974044789907,1.02341449813341,0.804269605718038,2.96836132889982,0.308419387605311,0.532685175939381,1.39616165223476,0,3.1376802184189,0.362578348774867,0,0,0.114814448164607,0.182091168006717,0.262248829918848,0.451199612907412,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.656029291399411,0,3.81251743096572,0.0915694648183434,0,0,0,1.6068392984416,0.193341436584244,0.154048617114644,0.614014698904518,0,0,0.580066775656914,1.10794615640931,0.0890320356467374,0,0,0,0,0,11.6480568327337,2.0911118104818,0,0.532306030317022,0.869932992075073,1.48259375283136,0.143124886741991,0.372158369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| ||
|short_description=p1@NR4A3 | |short_description=p1@NR4A3 | ||
}} | }} |
Latest revision as of 20:27, 19 September 2015
Short description: | p1@NR4A3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_NR4A3_5end |
Coexpression cluster: | C1466_immature_Mast_CD14_Eosinophils_CD8_CD4_Basophils |
Association with transcript: | 107bp_to_ENST00000395096_5end |
EntrezGene: | NR4A3 |
HGNC: | 7982 |
UniProt: | E9PBS2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 1.53e-24 | 72 |
classical monocyte | 1.43e-22 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.43e-22 | 42 |
defensive cell | 4.92e-22 | 48 |
phagocyte | 4.92e-22 | 48 |
granulocyte monocyte progenitor cell | 3.12e-21 | 67 |
leukocyte | 2.15e-20 | 136 |
macrophage dendritic cell progenitor | 3.49e-19 | 61 |
myeloid lineage restricted progenitor cell | 5.49e-18 | 66 |
monopoietic cell | 7.48e-18 | 59 |
monocyte | 7.48e-18 | 59 |
monoblast | 7.48e-18 | 59 |
promonocyte | 7.48e-18 | 59 |
hematopoietic lineage restricted progenitor cell | 1.35e-12 | 120 |
nongranular leukocyte | 5.31e-12 | 115 |
myeloid cell | 8.87e-12 | 108 |
common myeloid progenitor | 8.87e-12 | 108 |
hematopoietic stem cell | 1.96e-10 | 168 |
dendritic cell | 3.98e-09 | 10 |
hematopoietic oligopotent progenitor cell | 7.09e-09 | 161 |
hematopoietic multipotent progenitor cell | 7.09e-09 | 161 |
hematopoietic cell | 1.14e-08 | 177 |
conventional dendritic cell | 6.68e-08 | 8 |
granulocyte | 4.45e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.45e-19 | 76 |
bone element | 1.76e-18 | 82 |
skeletal system | 1.53e-17 | 100 |
hematopoietic system | 2.01e-16 | 98 |
blood island | 2.01e-16 | 98 |
skeletal element | 1.23e-15 | 90 |
immune system | 4.21e-15 | 93 |
hemolymphoid system | 6.52e-13 | 108 |
adult organism | 1.35e-10 | 114 |