FFCP PHASE1:Hg19::chr3:119298429..119298454,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=141 | |EntrezGene=141 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=269 | |HGNC=269 | ||
|TSSclassifier=strong | |||
|UniProt=P54922 | |UniProt=P54922 | ||
|association_with_transcript=0bp_to_ENST00000478927_5end | |association_with_transcript=0bp_to_ENST00000478927_5end | ||
|cluster_id=chr3:119298429..119298454,+ | |||
|coexpression_cluster_id=C2675 | |||
|description=CAGE_peak_3_at_ADPRH_5end | |description=CAGE_peak_3_at_ADPRH_5end | ||
|id=chr3:119298429..119298454,+ | |id=chr3:119298429..119298454,+ | ||
|ontology_enrichment_celltype=CL:0002057!2.53e-27!42;CL:0000557!4.97e-26!71;CL:0002009!2.24e-25!65;CL:0002194!5.57e-24!63;CL:0000576!5.57e-24!63;CL:0000040!5.57e-24!63;CL:0000559!5.57e-24!63;CL:0000839!7.96e-24!70;CL:0000860!9.89e-24!45;CL:0000766!9.22e-23!76;CL:0000738!2.28e-14!140;CL:0000763!1.10e-12!112;CL:0000049!1.10e-12!112;CL:0002031!1.16e-12!124;CL:0002087!1.61e-12!119;CL:0000037!5.54e-08!172;CL:0000566!5.54e-08!172;CL:0000988!8.62e-08!182;CL:0002032!2.10e-07!165;CL:0000837!2.10e-07!165 | |ontology_enrichment_celltype=CL:0002057!2.53e-27!42;CL:0000557!4.97e-26!71;CL:0002009!2.24e-25!65;CL:0002194!5.57e-24!63;CL:0000576!5.57e-24!63;CL:0000040!5.57e-24!63;CL:0000559!5.57e-24!63;CL:0000839!7.96e-24!70;CL:0000860!9.89e-24!45;CL:0000766!9.22e-23!76;CL:0000738!2.28e-14!140;CL:0000763!1.10e-12!112;CL:0000049!1.10e-12!112;CL:0002031!1.16e-12!124;CL:0002087!1.61e-12!119;CL:0000037!5.54e-08!172;CL:0000566!5.54e-08!172;CL:0000988!8.62e-08!182;CL:0002032!2.10e-07!165;CL:0000837!2.10e-07!165 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.43e-47;33!CL:0002057;1.43e-47;33!CL:0000473;1.20e-39;39!CL:0000234;1.20e-39;39!CL:0000576;8.64e-31;48!CL:0000766;7.51e-23;69!CL:0000349;1.75e-09;19!CL:0000763;2.03e-09;100!CL:0002393;2.17e-09;6!CL:0002397;2.17e-09;6!CL:0002087;2.72e-08;104!CL:0000738;3.34e-08;136!CL:0002541;1.21e-07;3!CL:0002537;4.44e-07;5!CL:0000453;6.45e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,1.36e-58,48;CL:0000234,1.36e-58,48;CL:0000860,4.14e-58,42;CL:0002057,4.14e-58,42;CL:0000557,4.10e-50,67;CL:0002009,6.06e-48,61;CL:0000839,1.23e-45,66;CL:0000766,3.13e-45,72;CL:0002194,2.44e-44,59;CL:0000576,2.44e-44,59;CL:0000040,2.44e-44,59;CL:0000559,2.44e-44,59;CL:0000763,3.82e-32,108;CL:0000049,3.82e-32,108;CL:0000738,1.61e-31,136;CL:0002031,3.23e-27,120;CL:0002087,1.59e-25,115;CL:0000037,1.50e-22,168;CL:0002032,6.83e-21,161;CL:0000837,6.83e-21,161;CL:0000988,1.25e-20,177;CL:0000349,2.55e-09,19;CL:0000134,6.30e-09,354;CL:0002320,6.46e-09,361;CL:0000219,3.65e-08,386;CL:0002393,4.51e-08,9;CL:0002397,4.51e-08,9;CL:0002541,1.24e-07,3;CL:0000453,4.45e-07,5;CL:0002537,6.51e-07,5 | |||
|ontology_enrichment_development_v019=CL:0002057;9.54e-42;42!CL:0000049;4.23e-10;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!3.40e-24!80;UBERON:0002390!5.71e-23!102;UBERON:0003061!5.71e-23!102;UBERON:0002193!1.23e-22!112;UBERON:0001474!4.23e-20!86;UBERON:0002405!3.47e-17!115;UBERON:0003081!4.08e-17!216;UBERON:0004765!1.74e-15!101;UBERON:0001434!1.74e-15!101;UBERON:0002204!9.00e-10!167;UBERON:0005631!8.91e-08!14;UBERON:0000158!8.91e-08!14 | |||
|ontology_enrichment_uberon_v019=UBERON:0005631;5.83e-13;10!UBERON:0000158;5.83e-13;10!UBERON:0000478;1.02e-08;24!UBERON:0003124;1.21e-07;3!UBERON:0000920;1.21e-07;3!UBERON:0000305;1.76e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.28e-42,76;UBERON:0001474,1.56e-38,82;UBERON:0002390,1.26e-36,98;UBERON:0003061,1.26e-36,98;UBERON:0002405,9.60e-36,93;UBERON:0004765,1.46e-35,90;UBERON:0002193,1.62e-33,108;UBERON:0001434,1.14e-30,100;UBERON:0003081,4.06e-21,203;UBERON:0005631,1.14e-16,14;UBERON:0000158,1.14e-16,14;UBERON:0002204,9.77e-16,167;UBERON:0000926,6.85e-12,315;UBERON:0004120,6.85e-12,315;UBERON:0006603,6.85e-12,315;UBERON:0003124,3.39e-11,7;UBERON:0002384,9.73e-09,371;UBERON:0000478,1.41e-08,24;UBERON:0000920,1.24e-07,3;UBERON:0000305,2.43e-07,7 | |||
|phase1_expression=0.726713517082227,0.428201047781966,0.845726424575827,1.0007329835313,0.893922188854576,0,0,0,0,0.737201809504527,0.697801167972428,0.873765488520689,2.37390280405608,0.123766352960047,0,0.672325146451775,0,0,0.487932798790507,0.738726348460727,0.204000691244253,0.626909442956176,0,0.410623275218653,0,0.61130724598361,0.328402357799783,0.393553906568396,1.96682138424452,0.383829398097213,1.39334510984468,0,0,0,0,0,0.293600439334847,5.53995408531877,3.40925560699241,6.94434786290726,0.671746422719773,0.971680998056939,0.515151135268373,1.30858414901608,3.02300754951048,2.42584061187816,2.78914844286822,4.52284676824008,3.71647645074124,2.58923153089935,5.37937483711111,4.25668013799453,5.86067657252252,0.645484683583826,4.06279459783025,0.941211697713023,2.18324920046277,1.34834090667051,3.97909060082173,0.641858054152187,3.19668562899521,2.30895910130701,5.98390972864896,5.11469700639233,3.77272010217159,7.94339314567596,5.60540024096017,3.26623264833766,2.60741459210101,2.17188844705117,3.63239701580021,4.78760926783834,3.79754864929061,0.422510572623884,2.12604299965044,2.09658645508376,1.90958672949042,1.20141514273205,1.12507910687956,1.14005097496499,0.99458338599545,0.730656615058536,0,0,0,0,0,0.574752439954483,0,0.954053754535364,0,0,1.14681968437569,1.32171328579026,0.560508562981536,0.526768169550154,0.196709770113833,0,0,0.167186495390678,0,0,0,0,0,0.221533894583621,0,1.28091319725675,0.650296737799391,0.164437904603676,0,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0.267440195783507,0.144824403882799,0,0.670700859703636,0.255725123687061,0,0.50133791063589,0.289693037921647,0,0.486634870302636,0.378139268656271,0,0.263504357079378,0.851363990735132,0,0,0.324547393654683,0.522389211897802,0.26591592103773,0.238490624305342,0,0.371457501329565,0,0.860234595106124,0.347140501607594,0.56530794192401,0,0.275118041940067,0.208994966536811,0,0.35576626268671,0.33472061276467,0,0,0.24406205754817,0.367663080345869,0.81014194788176,0.357198913136319,0.22452937262617,0.900891843866578,0,0,0,0,0,0,0.496971951695318,0.25326102332916,0.264818361626438,0.286836620748814,0,0.560677600142307,0,0.24666754841716,0.311211035399766,0.134710672069688,0,0,0,0.234321431833797,0,0,0.149448680551801,0,0,0.280901613404497,0,0.122834317311768,0,0,0.247266929278557,0,0,0,0.125118519871964,0,0.438977620880838,0,0,0.340296549480063,0.358779271377724,0,0.211931901159562,0,0,0.257640540045629,0,0.168776332241266,0.292311015483596,0.504867548488229,0,0,0.355009592516614,0.10075209822764,0,0,0.545492241181669,0.286804595389004,0.121973706129595,0.397589304964456,0.116193942869518,0.207322110030741,0.252320850875628,0,0,0,0,0,1.44375896333917,0,0,0,0,0,0,0,0,0,0.738155454624648,0,0.8231480226628,0,0,0,0.590789906681404,0,0.491953754172454,0,0.109750285408626,0,0,0,0,0,0,0.115930404975077,0,0.144366447761074,0.925971025153221,0.380508304469197,0.790204397959275,0,0.492434012174795,0.468008530278475,1.63494278517601,0,0.335964256397719,0.141775097242386,0.358234090811393,0.290633938513962,0,0,0.880484340132261,1.86595303986695,13.8355155280283,1.8936365013957,0.063497894292169,1.14596527667483,0,1.71072446022705,0.308482478109971,0.300343057843917,1.42913216315289,0.224262168690721,0,0.07333828582095,0.258543431515556,0,0,0.26593811658487,1.04007436911366,0.257207374262142,0,0.532844358032199,0,0,0,0.325736184293735,0,0,0.301439377059586,0,0.499864955910285,2.43247561282381,1.50677127429638,0,0.239624855491583,0,0,0,0,0.358121926479791,0,0.788123040807709,0.431255149719035,0.385029108839245,0,0,0,0.167516265334349,0,0,0,0,0,1.00034104211935,0.271265023699736,0.207970861530807,0.356857977594324,0.630809660135739,0.35142424497814,0.902838299183157,0,0,0,0.553107505625109,0,0,0,1.03384013061444,1.72571360654893,2.02782359826544,2.12189300012382,0,2.11673205330776,0.744323423456331,1.2276957863045,0.280660094433074,0.384417447767103,0,0.482561763430822,0,0.462629081407967,0,0.0821271560138091,0.519254429183621,0.116210378459959,0.120859449591622,0.601519410909855,0.368323955743585,0.114814448164607,0.182091168006717,0.655622074797121,0,0,0,0,0.105551628892876,1.13733384070897,0.680374821106063,0.431831832204279,1.54227252690289,0,0,0,1.66215201785745,0.671624264166535,0,0,0.512900250232778,0.656029291399411,0.976135183992909,2.67906630284078,0,0,0,0,0,0.096670718292122,0.154048617114644,0,0.275673144969061,0.322260734604821,0.290033387828457,0,0.178064071293475,0.330569830721956,0.576570202095319,0.382838137483752,0.50578890427775,0.464845549297286,0,0,0,0,0,0,0.572499546967965,0.372158369359667,0.632758849437452,0.190630193923825,0.255897791311334,0.42793898803392,0,0,0.359744915166629,0,0.235624804691373,0.202182481573316,0,0.421258456238981,0,1.21856744815642,0,0.136499911407986,0.282810863907425,0,0,0,0,0,0,0,0.92947049429925,0.281695602532241,0,0,0.7133421029625,0,0.211107635297664,0,0,0,0,0.670302275535787,0,2.44773882019626,0,0,0,0,0.507447609232169,0,0.569647187174163,0.238231775457789,0,0,0,0,0,0,0.49008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| ||
|short_description=p3@ADPRH | |short_description=p3@ADPRH | ||
}} | }} |
Latest revision as of 20:30, 19 September 2015
Short description: | p3@ADPRH |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_ADPRH_5end |
Coexpression cluster: | C2675_Mast_CD14_immature_placenta_Basophils_Renal_chorionic |
Association with transcript: | 0bp_to_ENST00000478927_5end |
EntrezGene: | ADPRH |
HGNC: | 269 |
UniProt: | P54922 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.28e-42 | 76 |
bone element | 1.56e-38 | 82 |
hematopoietic system | 1.26e-36 | 98 |
blood island | 1.26e-36 | 98 |
immune system | 9.60e-36 | 93 |
skeletal element | 1.46e-35 | 90 |
hemolymphoid system | 1.62e-33 | 108 |
skeletal system | 1.14e-30 | 100 |
lateral plate mesoderm | 4.06e-21 | 203 |
extraembryonic membrane | 1.14e-16 | 14 |
membranous layer | 1.14e-16 | 14 |
musculoskeletal system | 9.77e-16 | 167 |
mesoderm | 6.85e-12 | 315 |
mesoderm-derived structure | 6.85e-12 | 315 |
presumptive mesoderm | 6.85e-12 | 315 |
chorion | 3.39e-11 | 7 |
connective tissue | 9.73e-09 | 371 |
extraembryonic structure | 1.41e-08 | 24 |
egg chorion | 1.24e-07 | 3 |
amnion | 2.43e-07 | 7 |