FFCP PHASE1:Hg19::chr1:92949505..92949543,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2672 | |EntrezGene=2672 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4237 | |HGNC=4237 | ||
|TSSclassifier=strong | |||
|UniProt=Q99684 | |UniProt=Q99684 | ||
|association_with_transcript=0bp_to_ENST00000370332_5end | |association_with_transcript=0bp_to_ENST00000370332_5end | ||
|cluster_id=chr1:92949505..92949543,- | |||
|description=CAGE_peak_5_at_GFI1_5end | |description=CAGE_peak_5_at_GFI1_5end | ||
|id=chr1:92949505..92949543,- | |id=chr1:92949505..92949543,- | ||
|ontology_enrichment_celltype=CL:0000988!6.91e-25!182;CL:0000037!4.81e-24!172;CL:0000566!4.81e-24!172;CL:0002032!2.21e-20!165;CL:0000837!2.21e-20!165;CL:0000542!4.91e-11!53;CL:0000051!4.91e-11!53;CL:0000838!3.69e-10!52;CL:0000763!4.20e-10!112;CL:0000049!4.20e-10!112;CL:0000738!5.39e-09!140;CL:0000080!3.93e-07!6;CL:0002274!5.00e-07!5;CL:0000457!5.00e-07!5;CL:0002191!5.00e-07!5;CL:0000097!5.00e-07!5;CL:0000831!5.00e-07!5;CL:0002028!5.00e-07!5 | |ontology_enrichment_celltype=CL:0000988!6.91e-25!182;CL:0000037!4.81e-24!172;CL:0000566!4.81e-24!172;CL:0002032!2.21e-20!165;CL:0000837!2.21e-20!165;CL:0000542!4.91e-11!53;CL:0000051!4.91e-11!53;CL:0000838!3.69e-10!52;CL:0000763!4.20e-10!112;CL:0000049!4.20e-10!112;CL:0000738!5.39e-09!140;CL:0000080!3.93e-07!6;CL:0002274!5.00e-07!5;CL:0000457!5.00e-07!5;CL:0002191!5.00e-07!5;CL:0000097!5.00e-07!5;CL:0000831!5.00e-07!5;CL:0002028!5.00e-07!5 | ||
|ontology_enrichment_celltype_v019=CL:0000097;7.14e-23;5!CL:0000163;8.23e-13;9!CL:0000763;1.77e-09;100!CL:0002032;2.95e-08;1!CL:0000557;2.95e-08;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000097,6.02e-23,5;CL:0002028,6.02e-23,5;CL:0000763,8.44e-23,108;CL:0000049,8.44e-23,108;CL:0000037,1.29e-16,168;CL:0002032,9.04e-16,161;CL:0000837,9.04e-16,161;CL:0000988,1.44e-15,177;CL:0000163,7.50e-13,9 | |||
|ontology_enrichment_development_v019=CL:0000049;5.65e-09;108!UBERON:0000358;1.65e-08;1 | |||
|ontology_enrichment_disease=DOID:1240!9.27e-30!39;DOID:8692!3.11e-26!31;DOID:2531!9.79e-26!51;DOID:0060083!9.79e-26!51;DOID:0050686!5.00e-07!137 | |ontology_enrichment_disease=DOID:1240!9.27e-30!39;DOID:8692!3.11e-26!31;DOID:2531!9.79e-26!51;DOID:0060083!9.79e-26!51;DOID:0050686!5.00e-07!137 | ||
|ontology_enrichment_disease_v019=DOID:8692;8.57e-48;31!DOID:1240;1.30e-30;39!DOID:2531;1.24e-18;51!DOID:0060083;1.24e-18;51!DOID:225;1.06e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,4.16e-50,31;DOID:1240,2.98e-39,39;DOID:2531,2.39e-29,51;DOID:0060083,2.39e-29,51;DOID:0050686,2.06e-10,137;DOID:225,1.10e-08,1 | |||
|ontology_enrichment_uberon=UBERON:0004177!4.32e-09!7;UBERON:0002370!4.16e-08!4;UBERON:0005058!4.16e-08!4;UBERON:0009113!4.16e-08!4;UBERON:0003295!4.16e-08!4;UBERON:0005562!4.16e-08!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0002370;8.16e-15;2!UBERON:0005058;8.16e-15;2!UBERON:0009113;8.16e-15;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,6.47e-08,4;UBERON:0005058,6.47e-08,4;UBERON:0009113,6.47e-08,4;UBERON:0003295,6.47e-08,4;UBERON:0005562,6.47e-08,4 | |||
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| ||
|short_description=p5@GFI1 | |short_description=p5@GFI1 | ||
}} | }} |
Latest revision as of 20:30, 19 September 2015
Short description: | p5@GFI1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_GFI1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000370332_5end |
EntrezGene: | GFI1 |
HGNC: | 4237 |
UniProt: | Q99684 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 6.02e-23 | 5 |
basophil mast progenitor cell | 6.02e-23 | 5 |
myeloid cell | 8.44e-23 | 108 |
common myeloid progenitor | 8.44e-23 | 108 |
hematopoietic stem cell | 1.29e-16 | 168 |
hematopoietic oligopotent progenitor cell | 9.04e-16 | 161 |
hematopoietic multipotent progenitor cell | 9.04e-16 | 161 |
hematopoietic cell | 1.44e-15 | 177 |
endocrine cell | 7.50e-13 | 9 |
Ontology term | p-value | n |
---|---|---|
thymus | 6.47e-08 | 4 |
hemolymphoid system gland | 6.47e-08 | 4 |
thymic region | 6.47e-08 | 4 |
pharyngeal gland | 6.47e-08 | 4 |
thymus primordium | 6.47e-08 | 4 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 4.16e-50 | 31 |
leukemia | 2.98e-39 | 39 |
hematologic cancer | 2.39e-29 | 51 |
immune system cancer | 2.39e-29 | 51 |
organ system cancer | 2.06e-10 | 137 |
syndrome | 1.10e-08 | 1 |