FFCP PHASE1:Hg19::chr1:92952473..92952489,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr1:92952473..92952489,-
|short_description=p3@GFI1
|description=CAGE_peak_3_at_GFI1_5end
|association_with_transcript=-40bp_to_ENST00000294702,NM_005263,uc001...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=2672 | |EntrezGene=2672 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4237 | |HGNC=4237 | ||
|TSSclassifier=strong | |||
|UniProt=Q99684,B3KVN4 | |UniProt=Q99684,B3KVN4 | ||
|association_with_transcript=-40bp_to_ENST00000294702,NM_005263,uc001dow.3_5end | |||
|cluster_id=chr1:92952473..92952489,- | |||
|coexpression_cluster_id=C973 | |||
|description=CAGE_peak_3_at_GFI1_5end | |||
|id=chr1:92952473..92952489,- | |||
|ontology_enrichment_celltype=CL:0000988!5.91e-25!182;CL:0000037!1.06e-24!172;CL:0000566!1.06e-24!172;CL:0002032!2.18e-21!165;CL:0000837!2.18e-21!165;CL:0000738!2.90e-13!140;CL:0000763!5.72e-12!112;CL:0000049!5.72e-12!112;CL:0002087!2.37e-10!119;CL:0002031!5.75e-10!124;CL:0000542!1.25e-09!53;CL:0000051!1.25e-09!53;CL:0000838!5.33e-09!52;CL:0000791!5.73e-08!18;CL:0000789!5.73e-08!18;CL:0002420!5.73e-08!18;CL:0002419!5.73e-08!18;CL:0000790!5.73e-08!18;CL:0000625!2.10e-07!11;CL:0000084!6.12e-07!25;CL:0000827!6.12e-07!25 | |||
|ontology_enrichment_celltype_v019=CL:0000097;3.88e-10;5!CL:0000784;4.98e-10;3!CL:0000623;4.78e-09;3!CL:0000123;2.94e-07;2!CL:0000242;2.94e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,1.24e-24,177;CL:0000037,3.61e-22,168;CL:0002032,1.51e-19,161;CL:0000837,1.51e-19,161;CL:0000763,2.95e-10,108;CL:0000049,2.95e-10,108;CL:0000097,3.58e-10,5;CL:0002028,3.58e-10,5;CL:0000784,5.00e-10,3;CL:0000542,7.64e-10,53;CL:0000051,7.64e-10,53;CL:0000738,1.34e-09,136;CL:0000623,3.54e-09,3;CL:0000825,3.54e-09,3;CL:0000838,8.70e-09,52;CL:0002031,8.87e-09,120;CL:0000134,6.63e-08,354;CL:0002320,1.53e-07,361;CL:0000219,2.08e-07,386;CL:0000242,2.53e-07,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:8692!3.54e-17!31;DOID:1240!2.86e-16!39;DOID:2531!8.96e-16!51;DOID:0060083!8.96e-16!51 | |||
|ontology_enrichment_disease_v019=DOID:8692;8.21e-22;31!DOID:1240;2.08e-19;39!DOID:2531;6.30e-13;51!DOID:0060083;6.30e-13;51 | |||
|ontology_enrichment_disease_v019_2=DOID:1240,2.33e-24,39;DOID:8692,1.04e-22,31;DOID:2531,2.04e-19,51;DOID:0060083,2.04e-19,51 | |||
|ontology_enrichment_uberon=UBERON:0000178!3.84e-07!15;UBERON:0000179!3.84e-07!15;UBERON:0000463!3.84e-07!15;UBERON:0002390!3.96e-07!102;UBERON:0003061!3.96e-07!102 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,4.73e-07,371 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.29240217243854,3.36612416744778,2.99100968991981,0.393364276848904,0,0,0,0,0,0,0,2.05520307534393,0,0.200544447470142,0.868043482863407,0,0.647787332037959,0,0,0,0,0,0.411167888021826,0,0,0,0,0,0,0,0.188242339542605,0,0,0.306083892370903,0,0,0,0,0,0.290209238628584,0,0,0,0,0,0,0,0.316462387440884,0,0,0,0,0.150176892841506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.382273228125229,0,0,0.526768169550154,0,0,0.205601498999509,0.501559486172034,0.32592226663359,0.473447805734733,0,0.891283655081389,0.294605907474837,0,0.270803863765016,1.66518715643378,1.95089021339817,1.47994114143309,1.10540007114339,1.73881851441031,0,0,0,0.679856056185397,0,0.68725489096526,0.253019692019503,0.637130828648193,0,2.85135613334512,0.602300476311091,1.02389288923535,1.24930726552346,0.236777252044017,0,0.403213486449465,3.20928234940209,1.15859523106239,0,0.670700859703636,0,0,0,0,0,0,0.0945348171640679,0,0.087834785693126,0.0654895377488563,0,0,0.324547393654683,0.174129737299267,0.398873881556595,4.5313218618015,2.28797964312051,5.94332002127304,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163461903113459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0,0,0,0.132529768321485,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217879444092406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234004265139238,0.891786973732369,0,0,0,0,0,0,0,4.4024217006613,4.35389042635621,2.59415916150531,3.91351543621778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2162378064119,0,2.10833939483032,0,0,1.42636905040718,0,0,0,3.02629888782524,1.77327684181734,1.50939302401662,2.31017465303547,0,0,0,0,0,0,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0.215714200818617,0.213455115606889,0,0,0,0,0,0.280660094433074,0,0,0,0,0,0,0,0,0,0.241718899183244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,1.37354197227515,0.660075999364704,0,0,0,0,0,0,0.137836572484531,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.421258456238981,0,0,0,0.136499911407986,0,1.13008116620243,0,0,0,0,0,0,0,0,0.143411352204052,0,0,0,0,0,0,0,0,0,0,0,0.43050537267123,0,0,0,0.507447609232169,0.764637207142375,0,0.476463550915578,0.822724546172388,0,0.540031437238115,0,0,0,0.980160863924127,1.30062222588003,0,1.4939787103167,0,0,1.34053759092657,1.48171507906718,5.51857298466744,5.61594356226918,5.70586697582981,5.64047624782884,15.038068625404,0.677167111206413,5.62058262862948,6.86119004449562,4.68430861459359,41.5641467154475,13.8258343938806,11.854833718298,13.0142330535289,11.1371214379163,0,0,0.811367035427949,0.99921590399346,0,2.61996756571508,0,0,0,0,0,0,0,0,0,0,1.97764649072111,0,0,0.276283915531148,0,0,1.35393286007176,0,0.539210106883961,0.179021174675609,15.858743477033,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,1.37897349296586,0,0.520874984799877,0,0,0,0,0,0,0,0,0,0,0,0.0897576444097721,0.217294743844016,0,0,0,0,0.784901281975124,0.498635045700469,0,0,0,0,0.158936578980379,0,0,0,0.432777279484182,0.995261931078505,0.176915129006678,0,7.41302821701555,4.81899361891361,4.28129992972367,0,0,0,0.182454789215666,0,0,0.394584402849391,0,0,0,8.71875832604057,1.86638744515045,0,0,0,0,0,0,0,0,1.21882889212564,0.17472666824203,0,0,0,0,0,0,0,0,0.397429223405979,0,0,0,0,0.19980960958213,0,0,1.54435498075768,0,0,0.235694034616795,0,0,0,0,0,0,2.55493176133945,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,4.3330750268973,3.62629776877132,3.30277364885506,0,0.846733320657845,0,0,0,0,0.415440338029185,0,0,0,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0.246277562248017,0,0.453248366080503,0,0,0,0.13223260174269,0,0,0.640724475406168,0.314408610199332,0,0,0,0.852548188666271,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.49335849291011,2.8984205722165,0,0,0,0,0,0,0,0,0,0,0,0.449803112163605,0.155262956876259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214441591374926,0.521988583930423,0,0,0,0,0,0,0,0,0,0,0,0.303859956177382,0,0,0.531459361253452,0.654261577023377,0,0.737318726261158,0,0,11.2026316178848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.47317047000752,0,0,0,0,0,0,0,0,0,0,0,3.4351701475359,0.235939446695481,0,0.346576998451015,0,0,0,0.0752103283492573,0,2.34454203369928,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.230467975111559,0,0.0679697329768317,0,0.118193840883968,0,0,0,0.280272163313789,0,0,0,0,0,0,0,0,0,0,0,0,0.118332000730565,0,0,0,0,0,0,0,0.121917924982269,0,0,0,0,1.87151570769685,0,0,0,0.109940516745429,0.301925687133347,0.463044948647668,0.437119121007915,0,0,0,0,0,0.4226557275834,0,0,0,0,0,0,0,0.730336388246517,0,0,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0.0918948995348449,0,0,0,0,0.103432995861895,0,0,0.581300188524055,0.496597714366863,0.224263725161227,0.0636471582781649,0.202117188958219,0,0,0.606168477131288,0.143444410785353,0,0.244209805832924,0,0,0,0,0,0,0,0,0 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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.29240217243854,3.36612416744778,2.99100968991981,0.393364276848904,0,0,0,0,0,0,0,2.05520307534393,0,0.200544447470142,0.868043482863407,0,0.647787332037959,0,0,0,0,0,0.411167888021826,0,0,0,0,0,0,0,0.188242339542605,0,0,0.306083892370903,0,0,0,0,0,0.290209238628584,0,0,0,0,0,0,0,0.316462387440884,0,0,0,0,0.150176892841506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.382273228125229,0,0,0.526768169550154,0,0,0.205601498999509,0.501559486172034,0.32592226663359,0.473447805734733,0,0.891283655081389,0.294605907474837,0,0.270803863765016,1.66518715643378,1.95089021339817,1.47994114143309,1.10540007114339,1.73881851441031,0,0,0,0.679856056185397,0,0.68725489096526,0.253019692019503,0.637130828648193,0,2.85135613334512,0.602300476311091,1.02389288923535,1.24930726552346,0.236777252044017,0,0.403213486449465,3.20928234940209,1.15859523106239,0,0.670700859703636,0,0,0,0,0,0,0.0945348171640679,0,0.087834785693126,0.0654895377488563,0,0,0.324547393654683,0.174129737299267,0.398873881556595,4.5313218618015,2.28797964312051,5.94332002127304,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163461903113459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0,0,0,0.132529768321485,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217879444092406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234004265139238,0.891786973732369,0,0,0,0,0,0,0,4.4024217006613,4.35389042635621,2.59415916150531,3.91351543621778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2162378064119,0,2.10833939483032,0,0,1.42636905040718,0,0,0,3.02629888782524,1.77327684181734,1.50939302401662,2.31017465303547,0,0,0,0,0,0,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0.215714200818617,0.213455115606889,0,0,0,0,0,0.280660094433074,0,0,0,0,0,0,0,0,0,0.241718899183244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,1.37354197227515,0.660075999364704,0,0,0,0,0,0,0.137836572484531,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.421258456238981,0,0,0,0.136499911407986,0,1.13008116620243,0,0,0,0,0,0,0,0,0.143411352204052,0,0,0,0,0,0,0,0,0,0,0,0.43050537267123,0,0,0,0.507447609232169,0.764637207142375,0,0.476463550915578,0.822724546172388,0,0.540031437238115,0,0,0,0.980160863924127,1.30062222588003,0,1.4939787103167,0,0,1.34053759092657,1.48171507906718,5.51857298466744,5.61594356226918,5.70586697582981,5.64047624782884,15.038068625404,0.677167111206413,5.62058262862948,6.86119004449562,4.68430861459359,41.5641467154475,13.8258343938806,11.854833718298,13.0142330535289,11.1371214379163,0,0,0.811367035427949,0.99921590399346,0,2.61996756571508,0,0,0,0,0,0,0,0,0,0,1.97764649072111,0,0,0.276283915531148,0,0,1.35393286007176,0,0.539210106883961,0.179021174675609,15.858743477033,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,1.37897349296586,0,0.520874984799877,0,0,0,0,0,0,0,0,0,0,0,0.0897576444097721,0.217294743844016,0,0,0,0,0.784901281975124,0.498635045700469,0,0,0,0,0.158936578980379,0,0,0,0.432777279484182,0.995261931078505,0.176915129006678,0,7.41302821701555,4.81899361891361,4.28129992972367,0,0,0,0.182454789215666,0,0,0.394584402849391,0,0,0,8.71875832604057,1.86638744515045,0,0,0,0,0,0,0,0,1.21882889212564,0.17472666824203,0,0,0,0,0,0,0,0,0.397429223405979,0,0,0,0,0.19980960958213,0,0,1.54435498075768,0,0,0.235694034616795,0,0,0,0,0,0,2.55493176133945,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,4.3330750268973,3.62629776877132,3.30277364885506,0,0.846733320657845,0,0,0,0,0.415440338029185,0,0,0,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0.246277562248017,0,0.453248366080503,0,0,0,0.13223260174269,0,0,0.640724475406168,0.314408610199332,0,0,0,0.852548188666271,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.49335849291011,2.8984205722165,0,0,0,0,0,0,0,0,0,0,0,0.449803112163605,0.155262956876259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214441591374926,0.521988583930423,0,0,0,0,0,0,0,0,0,0,0,0.303859956177382,0,0,0.531459361253452,0.654261577023377,0,0.737318726261158,0,0,11.2026316178848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.47317047000752,0,0,0,0,0,0,0,0,0,0,0,3.4351701475359,0.235939446695481,0,0.346576998451015,0,0,0,0.0752103283492573,0,2.34454203369928,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.230467975111559,0,0.0679697329768317,0,0.118193840883968,0,0,0,0.280272163313789,0,0,0,0,0,0,0,0,0,0,0,0,0.118332000730565,0,0,0,0,0,0,0,0.121917924982269,0,0,0,0,1.87151570769685,0,0,0,0.109940516745429,0.301925687133347,0.463044948647668,0.437119121007915,0,0,0,0,0,0.4226557275834,0,0,0,0,0,0,0,0.730336388246517,0,0,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0.0918948995348449,0,0,0,0,0.103432995861895,0,0,0.581300188524055,0.496597714366863,0.224263725161227,0.0636471582781649,0.202117188958219,0,0,0.606168477131288,0.143444410785353,0,0.244209805832924,0,0,0,0,0,0,0,0,0 | ||
|short_description=p3@GFI1 | |||
}} | }} |
Latest revision as of 20:35, 19 September 2015
Short description: | p3@GFI1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_GFI1_5end |
Coexpression cluster: | C973_acute_granulocyte_CD34_CD133_myelodysplastic_biphenotypic_liver |
Association with transcript: | -40bp_to_ENST00000294702, NM_005263, uc001dow.3_5end |
EntrezGene: | GFI1 |
HGNC: | 4237 |
UniProt: | Q99684B3KVN4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 1.24e-24 | 177 |
hematopoietic stem cell | 3.61e-22 | 168 |
hematopoietic oligopotent progenitor cell | 1.51e-19 | 161 |
hematopoietic multipotent progenitor cell | 1.51e-19 | 161 |
myeloid cell | 2.95e-10 | 108 |
common myeloid progenitor | 2.95e-10 | 108 |
mast cell | 3.58e-10 | 5 |
basophil mast progenitor cell | 3.58e-10 | 5 |
plasmacytoid dendritic cell | 5.00e-10 | 3 |
lymphocyte | 7.64e-10 | 53 |
common lymphoid progenitor | 7.64e-10 | 53 |
leukocyte | 1.34e-09 | 136 |
natural killer cell | 3.54e-09 | 3 |
pro-NK cell | 3.54e-09 | 3 |
lymphoid lineage restricted progenitor cell | 8.70e-09 | 52 |
hematopoietic lineage restricted progenitor cell | 8.87e-09 | 120 |
mesenchymal cell | 6.63e-08 | 354 |
connective tissue cell | 1.53e-07 | 361 |
motile cell | 2.08e-07 | 386 |
Merkel cell | 2.53e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 4.73e-07 | 371 |
Ontology term | p-value | n |
---|---|---|
leukemia | 2.33e-24 | 39 |
myeloid leukemia | 1.04e-22 | 31 |
hematologic cancer | 2.04e-19 | 51 |
immune system cancer | 2.04e-19 | 51 |