FFCP PHASE1:Hg19::chr6:112115103..112115122,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2534 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4037 | |||
|TSSclassifier=strong | |||
|UniProt=E5RHX7 | |||
|association_with_transcript=0bp_to_ENST00000462598_5end | |||
|cluster_id=chr6:112115103..112115122,- | |||
|coexpression_cluster_id=C98 | |||
|description=CAGE_peak_10_at_FYN_5end | |||
|id=chr6:112115103..112115122,- | |||
|ontology_enrichment_celltype=CL:0000791!6.56e-30!18;CL:0000789!6.56e-30!18;CL:0002420!6.56e-30!18;CL:0002419!6.56e-30!18;CL:0000790!6.56e-30!18;CL:0000084!3.03e-24!25;CL:0000827!3.03e-24!25;CL:0000838!1.64e-22!52;CL:0000542!6.76e-22!53;CL:0000051!6.76e-22!53;CL:0000625!4.04e-20!11;CL:0000738!3.01e-19!140;CL:0002087!9.78e-16!119;CL:0000037!4.65e-15!172;CL:0000566!4.65e-15!172;CL:0000988!6.44e-15!182;CL:0002031!3.23e-14!124;CL:0002032!8.86e-14!165;CL:0000837!8.86e-14!165;CL:0000624!5.75e-10!6;CL:0000080!4.79e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0000791;7.96e-52;18!CL:0000789;7.96e-52;18!CL:0002419;7.96e-52;18!CL:0000625;3.95e-48;11!CL:0000084;2.67e-36;25!CL:0000542;2.60e-17;53!CL:0000623;3.83e-14;3!CL:0002087;8.91e-08;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,9.57e-52,18;CL:0000789,9.57e-52,18;CL:0002420,9.57e-52,18;CL:0002419,9.57e-52,18;CL:0000790,9.57e-52,18;CL:0000625,4.05e-48,11;CL:0000084,3.04e-36,25;CL:0000827,3.04e-36,25;CL:0000838,1.74e-35,52;CL:0000542,1.03e-34,53;CL:0000051,1.03e-34,53;CL:0000738,1.18e-19,136;CL:0002087,4.54e-19,115;CL:0002031,6.73e-15,120;CL:0000037,1.23e-14,168;CL:0000623,3.59e-14,3;CL:0000825,3.59e-14,3;CL:0000988,1.48e-13,177;CL:0002032,5.36e-13,161;CL:0000837,5.36e-13,161;CL:0000893,2.52e-09,2;CL:0002489,2.52e-09,2;CL:0000809,2.52e-09,2;CL:0000808,2.52e-09,2;CL:0000894,2.52e-09,2;CL:0000806,2.52e-09,2;CL:0000807,2.52e-09,2;CL:0000805,2.52e-09,2;CL:0002425,2.52e-09,2 | |||
|ontology_enrichment_development_v019=CL:0000790;7.96e-52;18!CL:0000051;2.60e-17;53!CL:0002425;3.31e-09;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!2.28e-17!15;UBERON:0000179!2.28e-17!15;UBERON:0000463!2.28e-17!15;UBERON:0007023!8.77e-13!115;UBERON:0002390!1.45e-08!102;UBERON:0003061!1.45e-08!102;UBERON:0002193!1.96e-08!112;UBERON:0004177!3.99e-08!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;4.88e-26;15!UBERON:0000179;4.88e-26;15!UBERON:0000463;4.88e-26;15!UBERON:0002390;1.81e-15;32!UBERON:0002193;8.74e-11;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,5.31e-26,15;UBERON:0000179,5.31e-26,15;UBERON:0000463,5.31e-26,15;UBERON:0004177,1.38e-09,7;UBERON:0005057,1.38e-09,7;UBERON:0002390,4.34e-07,98;UBERON:0003061,4.34e-07,98;UBERON:0002193,4.52e-07,108 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.12632391038937,3.53032534634767,3.14843125254717,1.18009283054671,9.97956435052753,0.928896739896456,0,0,0,0,0,0,0.553995408531877,0.802177789880567,1.51907609501096,0,1.94336199611388,0.77272670290256,0.290796477559129,0,0,0.232429036905685,0,0.309706370895104,0.28769239232215,0,0,0,0,0,0,0,0,0.612167784741805,0,0,0.329851300186716,0,0,0,0,0,0,0.521482918420201,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.587237189370939,0.382273228125229,0,2.80254281490768,0,1.180258620683,0.786021525498329,1.02800749499755,0,0.651844533267181,0.473447805734733,0,0.222820913770347,0.883817722424512,1.32920336750173,0.812411591295047,0,0.130059347559878,0.328875809207352,0,0,0,0.267540828089713,0,0.226618685395132,3.83220493601921,4.46715679127419,4.55435445635105,6.37130828648194,11.7195021694155,19.0090408889675,9.937957859133,12.2867146708242,8.74515085866421,10.4181990899367,15.6014319414999,20.9671012953722,10.6976078313403,10.7170058873271,0,0,0,0,0,0,0,0,0,0,0,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31780417436063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.492663237895943,0,0.207328115540772,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.79336230389644,17.1416761375677,4.52817907204986,7.18721003166591,0,0,0,0,0,0,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.92859249633486,0.431428401637234,4.26910231213777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0.0915694648183434,0.082509499920588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0.470719003883896,0,0,0,0,1.01489521846434,5.35246044999663,2.27858874869665,4.52640373369799,1.64544909234478,3.24236655596359,1.62009431171434,3.17250070517708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19538809540204,0.556812347790485,0,0,0,0,0,0.293016358543788,0,0.222886768554957,0,0,0,0,0,0,0,0,0,0,2.21027132424918,0,0,0,0,0,0,0,0.690503839458535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31900115973192,0,0.533034776018635,0,0,0,0,0,0,0.75901493089674,0,0,0,0,0,0,1.68069372556344,0,0,0.86494757262552,0.626531697032732,0.067401132980677,0,0,0,0,0,0.394584402849391,0,0,0.379119477770928,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0.484945082442097,0,0,0,0,0,0,0,0.426905989478705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.717873024576814,0,0,0,0,0,0,0.709048640765013,1.40106959247983,0.741438982396034,0,3.89497327502609,0,0,0,0,0,0,0,0.0607495566580247,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293104467356165,0,0,0,0,0,0.747511887973863,0.157204305099666,0.414239055347196,0.992332043623902,0.197611631897944,0,0,0,0,0,0,0,0,0,0.1251909307065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0,0,0,0,0,0.39997479170986,0,0,0,0,0,0,0,0.107824811396682,0,0.218419276384028,0.169732529954025,0,0,0,0,0,0,0,0,0.128458450192919,0,0,0,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,0,0.20170506870352,0,0,0,0,0,0,0,0.0634158101939068,0,0,0,0,0,0,0,0,0,0,0.115233987555779,0,0.0679697329768317,0,0,0,0.235479278551542,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0.198950775161368,0,0,0,0,1.85217979459067,0,0,0.245148321753905,0,0.392616934229891,0,0,0,2.91350145737546,0.580120991762195,1.19929387109915,0,0,0,0,0,0,0,0.0679914901909147,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0,0.0645889098360061,0,0,0,0,0,0,1.54909721933551,0.645499848534087,0,0,0,0,0,0,0.488965776731466,0,0,0.805095174364105,0 | |||
|short_description=p10@FYN | |||
}} |
Latest revision as of 21:30, 19 September 2015
Short description: | p10@FYN |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_FYN_5end |
Coexpression cluster: | C98_CD8_Natural_Basophils_blood_CD4_Peripheral_Whole |
Association with transcript: | 0bp_to_ENST00000462598_5end |
EntrezGene: | FYN |
HGNC: | 4037 |
UniProt: | E5RHX7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 9.57e-52 | 18 |
alpha-beta T cell | 9.57e-52 | 18 |
immature T cell | 9.57e-52 | 18 |
mature T cell | 9.57e-52 | 18 |
immature alpha-beta T cell | 9.57e-52 | 18 |
CD8-positive, alpha-beta T cell | 4.05e-48 | 11 |
T cell | 3.04e-36 | 25 |
pro-T cell | 3.04e-36 | 25 |
lymphoid lineage restricted progenitor cell | 1.74e-35 | 52 |
lymphocyte | 1.03e-34 | 53 |
common lymphoid progenitor | 1.03e-34 | 53 |
leukocyte | 1.18e-19 | 136 |
nongranular leukocyte | 4.54e-19 | 115 |
hematopoietic lineage restricted progenitor cell | 6.73e-15 | 120 |
hematopoietic stem cell | 1.23e-14 | 168 |
natural killer cell | 3.59e-14 | 3 |
pro-NK cell | 3.59e-14 | 3 |
hematopoietic cell | 1.48e-13 | 177 |
hematopoietic oligopotent progenitor cell | 5.36e-13 | 161 |
hematopoietic multipotent progenitor cell | 5.36e-13 | 161 |
thymocyte | 2.52e-09 | 2 |
double negative thymocyte | 2.52e-09 | 2 |
double-positive, alpha-beta thymocyte | 2.52e-09 | 2 |
DN4 thymocyte | 2.52e-09 | 2 |
DN1 thymic pro-T cell | 2.52e-09 | 2 |
DN2 thymocyte | 2.52e-09 | 2 |
DN3 thymocyte | 2.52e-09 | 2 |
immature single positive thymocyte | 2.52e-09 | 2 |
early T lineage precursor | 2.52e-09 | 2 |
Ontology term | p-value | n |
---|---|---|
blood | 5.31e-26 | 15 |
haemolymphatic fluid | 5.31e-26 | 15 |
organism substance | 5.31e-26 | 15 |
hemopoietic organ | 1.38e-09 | 7 |
immune organ | 1.38e-09 | 7 |
hematopoietic system | 4.34e-07 | 98 |
blood island | 4.34e-07 | 98 |
hemolymphoid system | 4.52e-07 | 108 |