Personal tools

FFCP PHASE1:Hg19::chr10:90983491..90983502,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
(9 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|DHSsupport=supported 
|DPIdataset=robust
|EntrezGene=3988
|EntrezGene=3988
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding
|HGNC=6617
|HGNC=6617
|TSSclassifier=strong
|UniProt=
|UniProt=
|association_with_transcript=-6bp_to_ENST00000540050_5end
|association_with_transcript=-6bp_to_ENST00000540050_5end
|cluster_id=chr10:90983491..90983502,-
|coexpression_cluster_id=C54
|description=CAGE_peak_15_at_LIPA_5end
|description=CAGE_peak_15_at_LIPA_5end
|id=chr10:90983491..90983502,-
|id=chr10:90983491..90983502,-
|ontology_enrichment_celltype=CL:0002194!1.47e-10!63;CL:0000576!1.47e-10!63;CL:0000040!1.47e-10!63;CL:0000559!1.47e-10!63;CL:0002009!4.82e-10!65;CL:0000839!6.83e-09!70;CL:0000557!1.11e-08!71;CL:0000766!1.00e-07!76
|ontology_enrichment_celltype=CL:0002194!1.47e-10!63;CL:0000576!1.47e-10!63;CL:0000040!1.47e-10!63;CL:0000559!1.47e-10!63;CL:0002009!4.82e-10!65;CL:0000839!6.83e-09!70;CL:0000557!1.11e-08!71;CL:0000766!1.00e-07!76
|ontology_enrichment_celltype_v019=CL:0000235;1.52e-65;6!CL:0000840;5.55e-38;5!CL:0000990;1.27e-25;8!CL:0000451;4.06e-21;10!CL:0000473;1.89e-10;39!CL:0000234;1.89e-10;39
|ontology_enrichment_celltype_v019_2=CL:0000235,1.95e-65,6;CL:0000840,5.56e-38,5;CL:0001029,5.56e-38,5;CL:0000990,1.27e-25,8;CL:0000451,4.06e-21,10;CL:0002194,3.12e-20,59;CL:0000576,3.12e-20,59;CL:0000040,3.12e-20,59;CL:0000559,3.12e-20,59;CL:0002009,1.39e-19,61;CL:0000839,3.93e-18,66;CL:0000557,7.24e-18,67;CL:0000766,1.19e-16,72;CL:0000763,3.66e-11,108;CL:0000049,3.66e-11,108;CL:0002087,1.73e-10,115;CL:0002031,4.71e-10,120;CL:0000738,7.15e-09,136;CL:0000473,1.20e-08,48;CL:0000234,1.20e-08,48;CL:0002032,1.73e-07,161;CL:0000837,1.73e-07,161;CL:0000037,3.59e-07,168;CL:0000988,8.41e-07,177
|ontology_enrichment_development_v019=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002371!7.90e-08!80;UBERON:0001474!1.27e-07!86;UBERON:0004765!7.12e-07!101;UBERON:0001434!7.12e-07!101
|ontology_enrichment_uberon_v019=
|ontology_enrichment_uberon_v019_2=UBERON:0002371,8.65e-16,76;UBERON:0001474,1.18e-14,82;UBERON:0004765,2.28e-13,90;UBERON:0002405,6.07e-13,93;UBERON:0002390,2.73e-12,98;UBERON:0003061,2.73e-12,98;UBERON:0001434,4.78e-12,100;UBERON:0002193,3.66e-11,108;UBERON:0002204,3.25e-07,167
|phase1_expression=0.181678379270557,0,0,0,0.446961094427288,0,0,0,0.261185628199839,0,0,0,0.263766978228454,0,0,0,0,0,0,0.123121058076788,0,0,0,0,0,0.0764134057479513,0.0821005894499457,0,0,0,0,0,0,0,0.0774672005803016,0,0,0,0,0.217010870715852,0.447830948479849,0.647787332037959,0,0,0,0,0,0,0,0.28769239232215,0,0.236482229888585,0.344745680736619,0,0,0,0,0.224723484445085,0,0.320929027076094,0,0,0.199463657621632,0,0,0,0,0,0.521482918420201,0,0.605399502633369,0,0,0,0.212604299965044,0,0.112328631146495,0,0.16072558669708,0,0.59675003159727,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164437904603676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0,0.221729397462564,0,0,0,0,2.27183175558278,2.61194605948901,4.38761269712255,0,0,0,0,0.860234595106124,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134710672069688,0,0,0,0,0.312160076830321,0,0,0.117434498643765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.355009592516614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168584690078102,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109750285408626,0,0.100528972411631,0,0,0,0,0,0,0.144366447761074,0,0,0,0,0.492434012174795,1.17002132569619,1.0404181360211,0,0.16798212819886,0,0.0895585227028483,0,0,0,0,0,0,0,0.063497894292169,0,0,0,0.102827492703324,0,0,0,0,0,0,0,0,0.26593811658487,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43247561282381,1.00451418286425,0,0,0,0,0.144781306667579,0.205476322550383,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.500170521059677,0,0,0.356857977594324,0.157702415033935,0,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0,0,0,0,0.128139149255701,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0.131124414959424,0,0,0,0,0,0,0.170093705276516,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107420244868274,0,0,0,0,0,0.127612712494584,0,0,0.31481234683064,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.54907405947211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569647187174163,0,0,0,0,0,0,0,0,0,0,0,0,0,0.191505370132367,0,0,0.280797178113459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236387681767936,0,0,0,0,0.120596438625408,0,0,0,0,0,0,0,0,0,0,0,0,0.0915975934018623,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134802265961354,0,0.234264445725339,0.182454789215666,0,0.485560759068186,0,1.20990716048664,0,0.063186579628488,0,0,0,0,0,0,0,0,0.173559738335131,0,0.174118413160805,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0,0.170388021785422,0,0.146552233678082,0,0.129282956361551,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1251909307065,0,0,0.0620964029413835,0,0,0,0.285465333544967,0,0,0,0,0,0,0,0,0,0,0,0.15543720058278,0,0,0,0,0.414706207840855,0,0,0,0,0,0,0.107410557042488,0,0,0,0,0,0,0,0,0,0,0,0.244736704506468,0,0,0,0.176689145945881,0,0,0.256241518587947,0,0,0,0,0,0,0,0,0,0,0,0.172214979660816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0981477185010256,0,0.183428598521679,0,0,0,0.198916222116275,0,0,0,0,0.327543835020193,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118193840883968,0,0,0,0,0,0.215927591218621,0,0,0,0,0,0,0,0.17071847709395,0,0,0.236664001461131,0,0.423387050190929,0,0,0,0,0,0,0,0,0,0.485710993059139,0,0,0,0,0,0,0.154348316215889,0.437119121007915,0.940634592723046,0,0,0,0,0.4226557275834,0,0,0,0,0,0,0,0,0,0.430018749454354,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151557396436479,0,0,0.103432995861895,0,0,0,0,0.112131862580613,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201273793591026,0
|phase1_expression=0.181678379270557,0,0,0,0.446961094427288,0,0,0,0.261185628199839,0,0,0,0.263766978228454,0,0,0,0,0,0,0.123121058076788,0,0,0,0,0,0.0764134057479513,0.0821005894499457,0,0,0,0,0,0,0,0.0774672005803016,0,0,0,0,0.217010870715852,0.447830948479849,0.647787332037959,0,0,0,0,0,0,0,0.28769239232215,0,0.236482229888585,0.344745680736619,0,0,0,0,0.224723484445085,0,0.320929027076094,0,0,0.199463657621632,0,0,0,0,0,0.521482918420201,0,0.605399502633369,0,0,0,0.212604299965044,0,0.112328631146495,0,0.16072558669708,0,0.59675003159727,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164437904603676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0,0.221729397462564,0,0,0,0,2.27183175558278,2.61194605948901,4.38761269712255,0,0,0,0,0.860234595106124,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134710672069688,0,0,0,0,0.312160076830321,0,0,0.117434498643765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.355009592516614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168584690078102,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109750285408626,0,0.100528972411631,0,0,0,0,0,0,0.144366447761074,0,0,0,0,0.492434012174795,1.17002132569619,1.0404181360211,0,0.16798212819886,0,0.0895585227028483,0,0,0,0,0,0,0,0.063497894292169,0,0,0,0.102827492703324,0,0,0,0,0,0,0,0,0.26593811658487,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43247561282381,1.00451418286425,0,0,0,0,0.144781306667579,0.205476322550383,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.500170521059677,0,0,0.356857977594324,0.157702415033935,0,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0,0,0,0,0.128139149255701,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0.131124414959424,0,0,0,0,0,0,0.170093705276516,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107420244868274,0,0,0,0,0,0.127612712494584,0,0,0.31481234683064,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.54907405947211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569647187174163,0,0,0,0,0,0,0,0,0,0,0,0,0,0.191505370132367,0,0,0.280797178113459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236387681767936,0,0,0,0,0.120596438625408,0,0,0,0,0,0,0,0,0,0,0,0,0.0915975934018623,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134802265961354,0,0.234264445725339,0.182454789215666,0,0.485560759068186,0,1.20990716048664,0,0.063186579628488,0,0,0,0,0,0,0,0,0.173559738335131,0,0.174118413160805,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0,0.170388021785422,0,0.146552233678082,0,0.129282956361551,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1251909307065,0,0,0.0620964029413835,0,0,0,0.285465333544967,0,0,0,0,0,0,0,0,0,0,0,0.15543720058278,0,0,0,0,0.414706207840855,0,0,0,0,0,0,0.107410557042488,0,0,0,0,0,0,0,0,0,0,0,0.244736704506468,0,0,0,0.176689145945881,0,0,0.256241518587947,0,0,0,0,0,0,0,0,0,0,0,0.172214979660816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0981477185010256,0,0.183428598521679,0,0,0,0.198916222116275,0,0,0,0,0.327543835020193,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118193840883968,0,0,0,0,0,0.215927591218621,0,0,0,0,0,0,0,0.17071847709395,0,0,0.236664001461131,0,0.423387050190929,0,0,0,0,0,0,0,0,0,0.485710993059139,0,0,0,0,0,0,0.154348316215889,0.437119121007915,0.940634592723046,0,0,0,0,0.4226557275834,0,0,0,0,0,0,0,0,0,0.430018749454354,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151557396436479,0,0,0.103432995861895,0,0,0,0,0.112131862580613,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201273793591026,0
|short_description=p15@LIPA
|short_description=p15@LIPA
}}
}}

Latest revision as of 21:33, 19 September 2015

Short description:p15@LIPA
Species:Human (Homo sapiens)
DPI dataset: Robust
TSS-like-by-RIKEN-classifier(Yes/No): Yes
DHS support(Yes/No): Yes
Description: CAGE_peak_15_at_LIPA_5end
Coexpression cluster:C54_Dendritic_Macrophage_Monocytederived_CD14_leiomyoma_adipose_immature
Association with transcript: -6bp_to_ENST00000540050_5end
EntrezGene:LIPA
HGNC: 6617
UniProt: NA
Genome view:ZENBU


View on UCSC genome browser


Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression




0.0
1.0
2.0
3.0
4.0
5.0




  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data