FFCP PHASE1:Hg19::chr1:94057518..94057547,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(9 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=100129046 | |EntrezGene=100129046 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_NR_034091,uc009wdn.2_5end | |association_with_transcript=0bp_to_NR_034091,uc009wdn.2_5end | ||
|cluster_id=chr1:94057518..94057547,+ | |||
|coexpression_cluster_id=C783 | |||
|description=CAGE_peak_1_at_LOC100129046_5end | |description=CAGE_peak_1_at_LOC100129046_5end | ||
|id=chr1:94057518..94057547,+ | |id=chr1:94057518..94057547,+ | ||
|ontology_enrichment_celltype=CL:0000181!6.46e-09!12;CL:0000417!6.46e-09!12;CL:0000668!6.46e-09!12;CL:0000414!6.46e-09!12;CL:0000412!6.46e-09!12;CL:0000182!6.46e-09!12;CL:0000223!6.52e-07!59 | |ontology_enrichment_celltype=CL:0000181!6.46e-09!12;CL:0000417!6.46e-09!12;CL:0000668!6.46e-09!12;CL:0000414!6.46e-09!12;CL:0000412!6.46e-09!12;CL:0000182!6.46e-09!12;CL:0000223!6.52e-07!59 | ||
|ontology_enrichment_celltype_v019=CL:0000182;4.43e-17;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,4.43e-17,12;CL:0000223,4.43e-09,58 | |||
|ontology_enrichment_development_v019=UBERON:0009497;9.96e-20;13!UBERON:0004161;1.70e-18;11!UBERON:0001041;2.84e-11;30!UBERON:0003104;1.84e-10;31!UBERON:0006595;7.06e-09;86!UBERON:0007297;1.96e-07;2 | |||
|ontology_enrichment_disease=DOID:305!1.77e-14!106;DOID:0050687!6.34e-12!143;DOID:162!1.88e-07!235;DOID:14566!5.06e-07!239 | |||
|ontology_enrichment_disease_v019=DOID:3493;1.03e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3493,1.20e-07,2;DOID:305,1.55e-07,106 | |||
|ontology_enrichment_uberon=UBERON:0004921!5.37e-18!129;UBERON:0004185!5.37e-18!129;UBERON:0001007!1.80e-17!155;UBERON:0001555!1.80e-17!155;UBERON:0007026!1.80e-17!155;UBERON:0004119!2.05e-15!169;UBERON:0000925!2.05e-15!169;UBERON:0006595!2.05e-15!169;UBERON:0000077!1.19e-12!130;UBERON:0009497!6.96e-11!25;UBERON:0000015!6.96e-11!25;UBERON:0002423!6.96e-11!25;UBERON:0006235!6.96e-11!25;UBERON:0004161!6.96e-11!25;UBERON:0009854!1.95e-10!23;UBERON:0009856!3.01e-10!26;UBERON:0003929!3.49e-10!54;UBERON:0005172!4.21e-10!55;UBERON:0005173!4.21e-10!55;UBERON:0001041!8.70e-10!98;UBERON:0005409!1.01e-09!35;UBERON:0000466!1.14e-09!126;UBERON:0005057!1.39e-09!26;UBERON:0008835!2.55e-09!22;UBERON:0003894!2.55e-09!22;UBERON:0007499!3.50e-09!25;UBERON:0005911!6.30e-09!82;UBERON:0005177!1.68e-08!107;UBERON:0002417!1.75e-08!61;UBERON:0000916!1.75e-08!61;UBERON:0002107!6.64e-08!19;UBERON:0006925!6.64e-08!19;UBERON:0008836!6.64e-08!19;UBERON:0000160!7.00e-08!27;UBERON:0007023!1.08e-07!115;UBERON:0002368!2.97e-07!35;UBERON:0000059!4.26e-07!11;UBERON:0002530!4.78e-07!59;UBERON:0002365!6.53e-07!31;UBERON:0002330!6.53e-07!31 | |||
|ontology_enrichment_uberon_v019=UBERON:0005409;2.37e-18;22!UBERON:0004921;6.35e-18;33!UBERON:0002423;4.14e-17;25!UBERON:0002107;4.89e-16;19!UBERON:0006925;4.89e-16;19!UBERON:0002365;7.45e-15;31!UBERON:0002330;7.45e-15;31!UBERON:0000160;7.33e-14;17!UBERON:0006947;2.92e-10;3!UBERON:0004054;2.92e-10;3!UBERON:0001007;4.00e-10;81!UBERON:0005904;8.50e-08;4!UBERON:0002368;1.12e-07;33!UBERON:0000059;1.39e-07;11!UBERON:0001041;2.05e-07;14!UBERON:0001829;3.34e-07;2!UBERON:0002530;5.32e-07;57!UBERON:0000949;6.03e-07;43!UBERON:0002108;6.65e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004921,3.30e-23,118;UBERON:0009854,8.89e-19,23;UBERON:0001007,1.18e-18,145;UBERON:0001555,1.18e-18,145;UBERON:0007026,1.18e-18,145;UBERON:0009497,4.11e-17,25;UBERON:0000015,4.11e-17,25;UBERON:0002423,4.11e-17,25;UBERON:0006235,4.11e-17,25;UBERON:0004161,4.11e-17,25;UBERON:0008835,1.29e-16,22;UBERON:0003894,1.29e-16,22;UBERON:0009856,2.78e-16,26;UBERON:0004119,4.26e-16,160;UBERON:0000925,4.26e-16,160;UBERON:0006595,4.26e-16,160;UBERON:0002107,4.89e-16,19;UBERON:0006925,4.89e-16,19;UBERON:0008836,4.89e-16,19;UBERON:0005409,6.53e-16,25;UBERON:0002365,3.25e-15,31;UBERON:0002330,3.25e-15,31;UBERON:0007499,2.54e-14,25;UBERON:0000160,7.45e-14,17;UBERON:0005172,8.22e-12,54;UBERON:0005173,8.22e-12,54;UBERON:0001041,2.89e-11,87;UBERON:0003929,2.17e-10,54;UBERON:0002530,2.43e-10,59;UBERON:0006947,2.83e-10,3;UBERON:0004054,2.83e-10,3;UBERON:0002417,2.99e-10,60;UBERON:0000916,2.99e-10,60;UBERON:0005177,4.20e-10,101;UBERON:0011216,9.65e-10,223;UBERON:0005911,1.03e-08,82;UBERON:0000949,3.69e-08,45;UBERON:0005904,8.30e-08,4;UBERON:0002368,9.42e-08,35;UBERON:0000059,1.45e-07,11;UBERON:0001829,3.74e-07,2;UBERON:0002108,6.52e-07,4;UBERON:0009569,8.67e-07,112 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.152826811495903,0.164201178899891,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426730222566507,0.400395987036012,0,0,0,0,0,0.382273228125229,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270803863765016,0,0,0.164437904603676,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.0956652079634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,41.8291614912042,8.84544495009863,8.86184860022106,0,4.79654910318143,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.858486162094873,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.672510863961164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.07609688284813,0,0,0,0,0,0,0,0,0,0.211103257785751,1.13733384070897,0,0,0,0,0,0,0,0,0,0,0,0,0,13.9105365724425,0,0.082509499920588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,16.3810213351596,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30062222588003,0,0.853702120180969,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,19.4626162024549,0,0,0,0,0,0,0,0,0,0,0,0,0.597743964753209,4.14425873296722,36.2783156910157,0,0.123084805461069,0,0.0898683511473268,26.4951338519902,0,0.789147245095469,0,0,1.93866549219044,0,0,0,0,0,0,0.762760950878299,0,13.1002481831757,0,0,0,0,0,0,0,0,0,0,0.230850775511391,0,3.22789466143284,0.0897576444097721,0.977826347298073,0,0,0,0,0,0,0,0.19606253431774,0.167821586975843,0,0,0.210998064528027,5.06021705293358,0.706765357169704,0,18.9099766904916,12.0302287724541,18.9419344929424,0,0,0,0.134802265961354,0,0,0.364909578431332,2.93496928398135,0,3.55125962564451,16.9387002468129,0,0,0.901940516486955,0.933193722575224,0,0,0,0,1.13843818411917,0,0.347119476670262,0.0979923974143777,0,8.73633341210151,0,0.0967563312890851,0,0,0,0,0.225980740780532,0,0,0,0.977756913674015,0,6.83049583165928,0,3.60226042885265,0,5.8342299273068,0,0,0.235694034616795,0,0,0,0,0,0,0,0,0,0,0,0,0.998395002494955,0,0,0,0,8.15471646692177,14.3385391799147,12.856873907462,13.6155158585453,2.46068703786872,0.169346664131569,0,0,0,0,0,0,0,0,0,3.54625682846392,4.87827669655482,0,0,0,0,0,0,0,0,0,0,0,0,0,10.6983130585,7.95041333473328,0,0,4.27717094710824,0,0.427149650270779,2.67247318669432,0,0,0,0,0,0,0,0,0,1.88464915500281,0,0,0,0,0,0.0620964029413835,0.138348634936231,0,0,0,0,0,0.28984205722165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.28120759293973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107824811396682,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161475645631851,0,0,0.353909170043221,0.183428598521679,0.115525666150338,0,0,0,0.451261970095544,0,6.25211208986474,0,0,0,0,0,0,0,0,3.28954660114309,0,0,1.14986184875636,0,0,0,0,0.0887023701626388,0.460935950223117,0,0,0,0,0,1.0989032999072,0,0.840816489941367,4.56579360254748,0.647782773655864,0.47775168788705,0,0.158013611732727,0,0,0,0,0,0,2.58136415292167,0,0,2.54032230114557,0,0,0,5.36906072629403,2.0611549059201,20.6041293220035,0,0,0,0,0.467878926924211,0.795803100645473,0,0,0.219881033490858,12.8318417031673,17.1326630999637,11.1465375857018,14.5798361872072,0.735444965261716,0,0,0,0,0,0.0939839179798536,0,0,0.178553938605658,0,0,2.92134555298607,2.2936464170227,0,0,0,0,14.8127515344312,0,0,0,0,0.109265571963696,0,0,0.534434810531121,0.275684698604535,0,0.303114792872958,0.535928260312357,0,0,0,1.1903221573187,0.258355639344024,0.0620747142958579,0,0.381882949668989,0.404234377916439,0,0,0.134704106029175,1.93649954560226,0.99798106963804,0,0,0,0,2.34640942403454,0.488965776731466,0,1.33151354837103,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.152826811495903,0.164201178899891,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426730222566507,0.400395987036012,0,0,0,0,0,0.382273228125229,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270803863765016,0,0,0.164437904603676,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.0956652079634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,41.8291614912042,8.84544495009863,8.86184860022106,0,4.79654910318143,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.858486162094873,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.672510863961164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.07609688284813,0,0,0,0,0,0,0,0,0,0.211103257785751,1.13733384070897,0,0,0,0,0,0,0,0,0,0,0,0,0,13.9105365724425,0,0.082509499920588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,16.3810213351596,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30062222588003,0,0.853702120180969,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,19.4626162024549,0,0,0,0,0,0,0,0,0,0,0,0,0.597743964753209,4.14425873296722,36.2783156910157,0,0.123084805461069,0,0.0898683511473268,26.4951338519902,0,0.789147245095469,0,0,1.93866549219044,0,0,0,0,0,0,0.762760950878299,0,13.1002481831757,0,0,0,0,0,0,0,0,0,0,0.230850775511391,0,3.22789466143284,0.0897576444097721,0.977826347298073,0,0,0,0,0,0,0,0.19606253431774,0.167821586975843,0,0,0.210998064528027,5.06021705293358,0.706765357169704,0,18.9099766904916,12.0302287724541,18.9419344929424,0,0,0,0.134802265961354,0,0,0.364909578431332,2.93496928398135,0,3.55125962564451,16.9387002468129,0,0,0.901940516486955,0.933193722575224,0,0,0,0,1.13843818411917,0,0.347119476670262,0.0979923974143777,0,8.73633341210151,0,0.0967563312890851,0,0,0,0,0.225980740780532,0,0,0,0.977756913674015,0,6.83049583165928,0,3.60226042885265,0,5.8342299273068,0,0,0.235694034616795,0,0,0,0,0,0,0,0,0,0,0,0,0.998395002494955,0,0,0,0,8.15471646692177,14.3385391799147,12.856873907462,13.6155158585453,2.46068703786872,0.169346664131569,0,0,0,0,0,0,0,0,0,3.54625682846392,4.87827669655482,0,0,0,0,0,0,0,0,0,0,0,0,0,10.6983130585,7.95041333473328,0,0,4.27717094710824,0,0.427149650270779,2.67247318669432,0,0,0,0,0,0,0,0,0,1.88464915500281,0,0,0,0,0,0.0620964029413835,0.138348634936231,0,0,0,0,0,0.28984205722165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.28120759293973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107824811396682,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161475645631851,0,0,0.353909170043221,0.183428598521679,0.115525666150338,0,0,0,0.451261970095544,0,6.25211208986474,0,0,0,0,0,0,0,0,3.28954660114309,0,0,1.14986184875636,0,0,0,0,0.0887023701626388,0.460935950223117,0,0,0,0,0,1.0989032999072,0,0.840816489941367,4.56579360254748,0.647782773655864,0.47775168788705,0,0.158013611732727,0,0,0,0,0,0,2.58136415292167,0,0,2.54032230114557,0,0,0,5.36906072629403,2.0611549059201,20.6041293220035,0,0,0,0,0.467878926924211,0.795803100645473,0,0,0.219881033490858,12.8318417031673,17.1326630999637,11.1465375857018,14.5798361872072,0.735444965261716,0,0,0,0,0,0.0939839179798536,0,0,0.178553938605658,0,0,2.92134555298607,2.2936464170227,0,0,0,0,14.8127515344312,0,0,0,0,0.109265571963696,0,0,0.534434810531121,0.275684698604535,0,0.303114792872958,0.535928260312357,0,0,0,1.1903221573187,0.258355639344024,0.0620747142958579,0,0.381882949668989,0.404234377916439,0,0,0.134704106029175,1.93649954560226,0.99798106963804,0,0,0,0,2.34640942403454,0.488965776731466,0,1.33151354837103,0,0 | ||
|short_description=p1@LOC100129046 | |short_description=p1@LOC100129046 | ||
}} | }} |
Latest revision as of 21:47, 19 September 2015
Short description: | p1@LOC100129046 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_LOC100129046_5end |
Coexpression cluster: | C783_argyrophil_Hepatocyte_liver_gastrointestinal_hepatocellular_adenocarcinoma_Intestinal |
Association with transcript: | 0bp_to_NR_034091, uc009wdn.2_5end |
EntrezGene: | LOC100129046 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 4.43e-17 | 12 |
endodermal cell | 4.43e-09 | 58 |
Ontology term | p-value | n |
---|---|---|
signet ring cell adenocarcinoma | 1.20e-07 | 2 |
carcinoma | 1.55e-07 | 106 |