FFCP PHASE1:Hg19::chr7:87856303..87856312,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6717 | |EntrezGene=6717 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11292 | |HGNC=11292 | ||
|TSSclassifier=strong | |||
|UniProt=A8MTH6 | |UniProt=A8MTH6 | ||
|association_with_transcript=0bp_to_ENST00000394641,NM_198901,uc003ujr.1,uc011khh.1_5end | |association_with_transcript=0bp_to_ENST00000394641,NM_198901,uc003ujr.1,uc011khh.1_5end | ||
|cluster_id=chr7:87856303..87856312,- | |||
|coexpression_cluster_id=C190 | |coexpression_cluster_id=C190 | ||
|description=CAGE_peak_3_at_SRI_5end | |description=CAGE_peak_3_at_SRI_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000066!5.89e-07!254 | |ontology_enrichment_celltype=CL:0000066!5.89e-07!254 | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0008947;6.44e-22;29!UBERON:0006595;1.67e-09;86!UBERON:0001045;4.57e-07;1 | |ontology_enrichment_development_v019=UBERON:0008947;6.44e-22;29!UBERON:0006595;1.67e-09;86!UBERON:0001045;4.57e-07;1 | ||
|ontology_enrichment_disease=DOID:305!1.65e-16!106;DOID:0050687!2.24e-12!143 | |ontology_enrichment_disease=DOID:305!1.65e-16!106;DOID:0050687!2.24e-12!143 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2=DOID:305,9.37e-14,106;DOID:0050687,3.19e-09,143 | |||
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|ontology_enrichment_uberon_v019=UBERON:0001737;1.10e-50;9!UBERON:0001557;1.10e-50;9!UBERON:0000160;5.92e-20;17!UBERON:0005409;2.37e-15;22!UBERON:0000072;1.83e-13;37!UBERON:0000059;3.31e-13;11!UBERON:0000065;1.67e-12;44!UBERON:0002108;1.59e-11;4!UBERON:0001155;7.32e-11;9!UBERON:0004921;9.48e-09;33!UBERON:0001004;1.08e-08;65!UBERON:0001154;4.57e-07;1!UBERON:0001153;4.57e-07;1!UBERON:0009854;4.57e-07;1 | |ontology_enrichment_uberon_v019=UBERON:0001737;1.10e-50;9!UBERON:0001557;1.10e-50;9!UBERON:0000160;5.92e-20;17!UBERON:0005409;2.37e-15;22!UBERON:0000072;1.83e-13;37!UBERON:0000059;3.31e-13;11!UBERON:0000065;1.67e-12;44!UBERON:0002108;1.59e-11;4!UBERON:0001155;7.32e-11;9!UBERON:0004921;9.48e-09;33!UBERON:0001004;1.08e-08;65!UBERON:0001154;4.57e-07;1!UBERON:0001153;4.57e-07;1!UBERON:0009854;4.57e-07;1 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,8.76e-51,9;UBERON:0001557,5.73e-29,19;UBERON:0004921,2.13e-25,118;UBERON:0001007,1.37e-21,145;UBERON:0001555,1.37e-21,145;UBERON:0007026,1.37e-21,145;UBERON:0000160,6.23e-20,17;UBERON:0004119,4.44e-19,160;UBERON:0000925,4.44e-19,160;UBERON:0006595,4.44e-19,160;UBERON:0008947,2.91e-16,38;UBERON:0003258,2.91e-16,38;UBERON:0001041,1.25e-13,87;UBERON:0005409,2.00e-13,25;UBERON:0000059,3.57e-13,11;UBERON:0000065,4.44e-13,54;UBERON:0000072,6.79e-13,47;UBERON:0011216,5.07e-12,223;UBERON:0002108,1.54e-11,4;UBERON:0001155,7.70e-11,9;UBERON:0001004,6.41e-09,74;UBERON:0001154,4.85e-07,1;UBERON:0001153,4.85e-07,1;UBERON:0001045,4.85e-07,1;UBERON:0001048,8.67e-07,160 | |||
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| ||
|short_description=p3@SRI | |short_description=p3@SRI | ||
}} | }} |
Latest revision as of 21:56, 19 September 2015
Short description: | p3@SRI |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_SRI_5end |
Coexpression cluster: | C190_colon_small_rectum_duodenum_appendix_temporal_oral |
Association with transcript: | 0bp_to_ENST00000394641, NM_198901, uc003ujr.1, uc011khh.1_5end |
EntrezGene: | SRI |
HGNC: | 11292 |
UniProt: | A8MTH6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
larynx | 8.76e-51 | 9 |
upper respiratory tract | 5.73e-29 | 19 |
subdivision of digestive tract | 2.13e-25 | 118 |
digestive system | 1.37e-21 | 145 |
digestive tract | 1.37e-21 | 145 |
primitive gut | 1.37e-21 | 145 |
intestine | 6.23e-20 | 17 |
endoderm-derived structure | 4.44e-19 | 160 |
endoderm | 4.44e-19 | 160 |
presumptive endoderm | 4.44e-19 | 160 |
respiratory primordium | 2.91e-16 | 38 |
endoderm of foregut | 2.91e-16 | 38 |
foregut | 1.25e-13 | 87 |
gastrointestinal system | 2.00e-13 | 25 |
large intestine | 3.57e-13 | 11 |
respiratory tract | 4.44e-13 | 54 |
segment of respiratory tract | 6.79e-13 | 47 |
organ system subdivision | 5.07e-12 | 223 |
small intestine | 1.54e-11 | 4 |
colon | 7.70e-11 | 9 |
respiratory system | 6.41e-09 | 74 |
vermiform appendix | 4.85e-07 | 1 |
caecum | 4.85e-07 | 1 |
midgut | 4.85e-07 | 1 |
primordium | 8.67e-07 | 160 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 9.37e-14 | 106 |
cell type cancer | 3.19e-09 | 143 |