FFCP PHASE1:Hg19::chr17:37934280..37934299,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=22806 | |EntrezGene=22806 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13178 | |HGNC=13178 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=178bp_to_uc010wel.1_5end | |association_with_transcript=178bp_to_uc010wel.1_5end | ||
|cluster_id=chr17:37934280..37934299,- | |||
|coexpression_cluster_id=C1431 | |coexpression_cluster_id=C1431 | ||
|description=CAGE_peak_6_at_IKZF3_5end | |description=CAGE_peak_6_at_IKZF3_5end | ||
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|ontology_enrichment_celltype=CL:0000542!9.46e-52!53;CL:0000051!9.46e-52!53;CL:0000838!1.22e-50!52;CL:0000738!2.48e-31!140;CL:0002087!1.83e-30!119;CL:0002031!1.28e-25!124;CL:0000791!2.53e-25!18;CL:0000789!2.53e-25!18;CL:0002420!2.53e-25!18;CL:0002419!2.53e-25!18;CL:0000790!2.53e-25!18;CL:0000084!1.74e-24!25;CL:0000827!1.74e-24!25;CL:0000945!8.76e-23!24;CL:0000826!8.76e-23!24;CL:0000037!2.50e-21!172;CL:0000566!2.50e-21!172;CL:0000988!3.06e-21!182;CL:0002032!1.89e-18!165;CL:0000837!1.89e-18!165;CL:0000625!7.35e-17!11;CL:0000236!5.02e-14!14;CL:0000624!3.05e-09!6;CL:0000080!3.87e-07!6 | |ontology_enrichment_celltype=CL:0000542!9.46e-52!53;CL:0000051!9.46e-52!53;CL:0000838!1.22e-50!52;CL:0000738!2.48e-31!140;CL:0002087!1.83e-30!119;CL:0002031!1.28e-25!124;CL:0000791!2.53e-25!18;CL:0000789!2.53e-25!18;CL:0002420!2.53e-25!18;CL:0002419!2.53e-25!18;CL:0000790!2.53e-25!18;CL:0000084!1.74e-24!25;CL:0000827!1.74e-24!25;CL:0000945!8.76e-23!24;CL:0000826!8.76e-23!24;CL:0000037!2.50e-21!172;CL:0000566!2.50e-21!172;CL:0000988!3.06e-21!182;CL:0002032!1.89e-18!165;CL:0000837!1.89e-18!165;CL:0000625!7.35e-17!11;CL:0000236!5.02e-14!14;CL:0000624!3.05e-09!6;CL:0000080!3.87e-07!6 | ||
|ontology_enrichment_celltype_v019=CL:0000791;2.98e-40;18!CL:0000789;2.98e-40;18!CL:0002419;2.98e-40;18!CL:0000542;2.68e-35;53!CL:0000084;3.87e-34;25!CL:0000625;4.28e-29;11!CL:0000945;3.94e-24;24!CL:0000624;2.03e-15;6!CL:0002087;2.11e-12;104!CL:0000898;5.73e-09;3!CL:0000623;8.83e-09;3!CL:0000236;4.02e-08;13!CL:0000226;8.60e-08;3!CL:0000842;8.60e-08;3 | |ontology_enrichment_celltype_v019=CL:0000791;2.98e-40;18!CL:0000789;2.98e-40;18!CL:0002419;2.98e-40;18!CL:0000542;2.68e-35;53!CL:0000084;3.87e-34;25!CL:0000625;4.28e-29;11!CL:0000945;3.94e-24;24!CL:0000624;2.03e-15;6!CL:0002087;2.11e-12;104!CL:0000898;5.73e-09;3!CL:0000623;8.83e-09;3!CL:0000236;4.02e-08;13!CL:0000226;8.60e-08;3!CL:0000842;8.60e-08;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0000542,2.39e-66,53;CL:0000051,2.39e-66,53;CL:0000838,1.95e-64,52;CL:0000791,3.56e-40,18;CL:0000789,3.56e-40,18;CL:0002420,3.56e-40,18;CL:0002419,3.56e-40,18;CL:0000790,3.56e-40,18;CL:0000084,4.46e-34,25;CL:0000827,4.46e-34,25;CL:0002087,1.32e-33,115;CL:0000738,1.10e-29,136;CL:0000625,4.48e-29,11;CL:0002031,1.65e-25,120;CL:0000945,2.61e-24,24;CL:0000826,2.61e-24,24;CL:0000037,1.20e-21,168;CL:0000988,6.44e-20,177;CL:0002032,2.42e-18,161;CL:0000837,2.42e-18,161;CL:0000624,2.34e-15,6;CL:0000236,1.10e-09,14;CL:0000898,6.13e-09,3;CL:0000623,8.40e-09,3;CL:0000825,8.40e-09,3;CL:0000226,1.08e-07,3;CL:0000842,1.08e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000790;2.98e-40;18!CL:0000051;2.68e-35;53 | |ontology_enrichment_development_v019=CL:0000790;2.98e-40;18!CL:0000051;2.68e-35;53 | ||
|ontology_enrichment_disease=DOID:0060058!8.74e-08!10 | |ontology_enrichment_disease=DOID:0060058!8.74e-08!10 | ||
|ontology_enrichment_disease_v019=DOID:0060058;2.77e-08;10 | |ontology_enrichment_disease_v019=DOID:0060058;2.77e-08;10 | ||
|ontology_enrichment_disease_v019_2=DOID:0060058,2.64e-08,10 | |||
|ontology_enrichment_uberon=UBERON:0007023!1.28e-17!115;UBERON:0000178!8.83e-16!15;UBERON:0000179!8.83e-16!15;UBERON:0000463!8.83e-16!15;UBERON:0004177!3.52e-07!7;UBERON:0002390!7.10e-07!102;UBERON:0003061!7.10e-07!102 | |ontology_enrichment_uberon=UBERON:0007023!1.28e-17!115;UBERON:0000178!8.83e-16!15;UBERON:0000179!8.83e-16!15;UBERON:0000463!8.83e-16!15;UBERON:0004177!3.52e-07!7;UBERON:0002390!7.10e-07!102;UBERON:0003061!7.10e-07!102 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;2.08e-18;15!UBERON:0000179;2.08e-18;15!UBERON:0000463;2.08e-18;15!UBERON:0002390;4.23e-15;32!UBERON:0002193;5.22e-11;42!UBERON:0004177;3.70e-08;5!UBERON:0005057;3.70e-08;5 | |ontology_enrichment_uberon_v019=UBERON:0000178;2.08e-18;15!UBERON:0000179;2.08e-18;15!UBERON:0000463;2.08e-18;15!UBERON:0002390;4.23e-15;32!UBERON:0002193;5.22e-11;42!UBERON:0004177;3.70e-08;5!UBERON:0005057;3.70e-08;5 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,2.40e-18,15;UBERON:0000179,2.40e-18,15;UBERON:0000463,2.40e-18,15;UBERON:0004177,6.84e-09,7;UBERON:0005057,6.84e-09,7 | |||
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|short_description=p6@IKZF3 | |short_description=p6@IKZF3 | ||
}} | }} |
Latest revision as of 22:54, 19 September 2015
Short description: | p6@IKZF3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_IKZF3_5end |
Coexpression cluster: | C1431_CD4_Burkitt_CD8_diffuse_tonsil_spleen_lymphoma |
Association with transcript: | 178bp_to_uc010wel.1_5end |
EntrezGene: | IKZF3 |
HGNC: | 13178 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 2.39e-66 | 53 |
common lymphoid progenitor | 2.39e-66 | 53 |
lymphoid lineage restricted progenitor cell | 1.95e-64 | 52 |
mature alpha-beta T cell | 3.56e-40 | 18 |
alpha-beta T cell | 3.56e-40 | 18 |
immature T cell | 3.56e-40 | 18 |
mature T cell | 3.56e-40 | 18 |
immature alpha-beta T cell | 3.56e-40 | 18 |
T cell | 4.46e-34 | 25 |
pro-T cell | 4.46e-34 | 25 |
nongranular leukocyte | 1.32e-33 | 115 |
leukocyte | 1.10e-29 | 136 |
CD8-positive, alpha-beta T cell | 4.48e-29 | 11 |
hematopoietic lineage restricted progenitor cell | 1.65e-25 | 120 |
lymphocyte of B lineage | 2.61e-24 | 24 |
pro-B cell | 2.61e-24 | 24 |
hematopoietic stem cell | 1.20e-21 | 168 |
hematopoietic cell | 6.44e-20 | 177 |
hematopoietic oligopotent progenitor cell | 2.42e-18 | 161 |
hematopoietic multipotent progenitor cell | 2.42e-18 | 161 |
CD4-positive, alpha-beta T cell | 2.34e-15 | 6 |
B cell | 1.10e-09 | 14 |
naive T cell | 6.13e-09 | 3 |
natural killer cell | 8.40e-09 | 3 |
pro-NK cell | 8.40e-09 | 3 |
single nucleate cell | 1.08e-07 | 3 |
mononuclear cell | 1.08e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
blood | 2.40e-18 | 15 |
haemolymphatic fluid | 2.40e-18 | 15 |
organism substance | 2.40e-18 | 15 |
hemopoietic organ | 6.84e-09 | 7 |
immune organ | 6.84e-09 | 7 |
Ontology term | p-value | n |
---|---|---|
lymphoma | 2.64e-08 | 10 |