FFCP PHASE1:Hg19::chr7:92076714..92076729,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr7:92076714..92076729,+ to FFCP PHASE1:Hg19::chr7:92076714..92076729,+: NSchange) |
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(9 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=57798 | |EntrezGene=57798 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29941 | |HGNC=29941 | ||
|TSSclassifier=strong | |||
|UniProt=Q8WUU5 | |UniProt=Q8WUU5 | ||
|association_with_transcript=-35bp_to_NM_021167,uc003ulx.1,uc011khq.1_5end | |||
|cluster_id=chr7:92076714..92076729,+ | |||
|description=CAGE_peak_2_at_GATAD1_5end | |||
|id=chr7:92076714..92076729,+ | |||
|ontology_enrichment_celltype=CL:0000037!1.83e-29!172;CL:0000566!1.83e-29!172;CL:0002032!4.84e-27!165;CL:0000837!4.84e-27!165;CL:0000988!1.18e-26!182;CL:0000542!1.64e-26!53;CL:0000051!1.64e-26!53;CL:0002031!1.96e-26!124;CL:0000838!6.16e-26!52;CL:0002087!3.26e-25!119;CL:0000738!7.57e-25!140;CL:0000084!1.15e-12!25;CL:0000827!1.15e-12!25;CL:0000945!1.52e-12!24;CL:0000826!1.52e-12!24;CL:0000791!2.51e-12!18;CL:0000789!2.51e-12!18;CL:0002420!2.51e-12!18;CL:0002419!2.51e-12!18;CL:0000790!2.51e-12!18;CL:0000625!2.48e-08!11;CL:0000236!6.83e-08!14;CL:0000763!2.94e-07!112;CL:0000049!2.94e-07!112 | |||
|ontology_enrichment_celltype_v019=CL:0000542;4.99e-29;53!CL:0000084;2.35e-25;25!CL:0000791;6.99e-25;18!CL:0000789;6.99e-25;18!CL:0002419;6.99e-25;18!CL:0000945;2.63e-21;24!CL:0000625;2.45e-16;11!CL:0000236;1.03e-13;13!CL:0002087;2.93e-11;104!CL:0000624;1.52e-08;6!CL:0000738;5.71e-07;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000542,2.78e-53,53;CL:0000051,2.78e-53,53;CL:0000838,5.56e-52,52;CL:0000037,4.76e-36,168;CL:0002031,1.53e-35,120;CL:0002087,3.31e-35,115;CL:0000738,1.96e-34,136;CL:0000988,5.29e-33,177;CL:0002032,4.88e-32,161;CL:0000837,4.88e-32,161;CL:0000084,3.34e-26,25;CL:0000827,3.34e-26,25;CL:0000791,5.15e-26,18;CL:0000789,5.15e-26,18;CL:0002420,5.15e-26,18;CL:0002419,5.15e-26,18;CL:0000790,5.15e-26,18;CL:0000945,3.57e-22,24;CL:0000826,3.57e-22,24;CL:0000625,6.23e-17,11;CL:0000236,3.01e-15,14;CL:0000624,4.52e-09,6;CL:0000134,2.78e-07,354;CL:0002320,8.68e-07,361 | |||
|ontology_enrichment_development_v019=CL:0000051;4.99e-29;53!CL:0000790;6.99e-25;18 | |||
|ontology_enrichment_disease=DOID:2531!6.27e-09!51;DOID:0060083!6.27e-09!51 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.99e-10!102;UBERON:0003061!1.99e-10!102;UBERON:0002193!9.83e-09!112 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;9.02e-09;15!UBERON:0000179;9.02e-09;15!UBERON:0000463;9.02e-09;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,2.13e-08,15;UBERON:0000179,2.13e-08,15;UBERON:0000463,2.13e-08,15;UBERON:0002390,6.15e-08,98;UBERON:0003061,6.15e-08,98;UBERON:0002193,1.01e-07,108;UBERON:0002370,1.78e-07,4;UBERON:0005058,1.78e-07,4;UBERON:0009113,1.78e-07,4;UBERON:0003295,1.78e-07,4;UBERON:0005562,1.78e-07,4 | |||
|phase1_expression=0.181678379270557,0.214100523890983,0.281908808191942,0,0.446961094427288,0,0,0,0,0,0,0,0.263766978228454,0.123766352960047,0,0,0.602694528023977,0,0.487932798790507,0.123121058076788,0.204000691244253,0,0.286235987131057,0.273748850145768,0.376627918784408,1.83392173795083,1.14940825229924,1.96776953284198,0.393364276848904,0.383829398097213,1.70297735647684,0,0.30120591877825,0,3.25362242437267,1.9903692548239,2.05520307534393,0,0.802177789880567,0.434021741431704,0.447830948479849,1.29557466407592,1.03030227053675,0.290796477559129,0.377875943688809,0.242584061187816,0.464858073811369,0,0.309706370895104,0.575384784644301,0.512321413058201,0.236482229888585,1.37898272294647,0,1.35426486594342,0.188242339542605,1.09162460023138,0,0,0,0.639337125799041,0.329851300186716,0.398927315243264,0.852449501065388,0.290209238628584,0.56738522469114,0.622822248995575,0.251248665256743,0,0,0.605399502633369,0.368277635987565,0.316462387440884,0.211255286311942,0.637812899895131,1.25795187305026,0.561643155732475,0.901061357049038,0.48217676009124,1.14005097496499,1.19350006319454,1.0959849225878,0,1.63841583378639,2.66852776159066,3.41384178053206,2.00197993518006,2.87376219977242,0.661044872784862,2.86216126360609,2.27685187643779,2.34894875748376,2.6759125968766,2.64342657158052,1.12101712596307,1.31692042387539,1.96709770113833,1.17903228824749,2.2616164889946,1.83905144929746,2.28145586643513,1.4203434172042,1.94826728407911,0.891283655081389,1.76763544484902,0.443067789167242,2.16643091012012,1.40900451698243,1.30059347559878,1.47994114143309,1.93445012450094,1.73881851441031,2.96573126324121,1.87278579662799,2.09071047609954,1.35971211237079,1.91610246800961,2.06176467289578,2.02415753615602,2.54852331459277,1.30216690771284,2.85135613334512,2.10805166708882,1.79181255616186,2.49861453104692,2.8413270245282,3.28451198768419,2.41928091869679,1.60464117470104,2.31719046212478,0,0.670700859703636,0,0.361439152384566,0,0,0,0,0.0945348171640679,0.221729397462564,0.351339142772504,0.654895377488563,0.364295288292542,0.370784442784429,1.29818957461873,0.696518949197069,0.398873881556595,2.14641561874808,0,2.60020250930695,0,0,0,0,0,0,0.208994966536811,0,0,0,0.805658634218294,0,0,0.367663080345869,0,0.17859945656816,0,0,0,0,0,0,0,0.436094052142534,0.496971951695318,0,0.529636723252875,0,0,0,0,0.24666754841716,0,0,0.163461903113459,0,0,0.234321431833797,0.312160076830321,0,0,0.469737994575059,0.161872944368132,0.140450806702248,0,0.368502951935304,0,0,0,0,0,0,0.125118519871964,0,0,0,0.300476117813194,0,0,0,0.423863802319124,0,0.103052529238439,0,0,0.168776332241266,0,0.252433774244115,0,0.484938170456436,0,0.10075209822764,0,0.193260853163297,0.272746120590835,0,0.243947412259191,0,0,0.10366105501537,0,0,3.12899064659632,0,0,0,0,0,0.168584690078102,0,0,0.217879444092406,0,0,0,0.38474715694639,0,0,0,0,1.26755034821831,0,0,0.882926198829301,0.245976877086227,0,0.548751427043128,0,0.402115889646523,0.370353780634118,0.325808305310325,0,0,0.927443239800615,0.117408694235822,0,0.462985512576611,0,0,0,0.984868024349589,1.17002132569619,0.743155811443641,0,0.16798212819886,0,0.358234090811393,0.581267877027924,0,0.492663237895943,1.32072651019839,1.03664057770386,2.73827911492227,1.8936365013957,0.190493682876507,0,0,0,0.102827492703324,0,0,0.112131084345361,0,0.07333828582095,0.129271715757778,0,0,0,0,0.257207374262142,0,0.799266537048298,0.285955987316295,0.542621605391443,0,0.325736184293735,0,0.791951872933429,0.904318131178758,0.871533458600294,0.199945982364114,0,0,0,0.239624855491583,0,0,0,0.61642896765115,0.358121926479791,5.15591662370225,2.56139988262505,1.72502059887614,2.82354679815446,0,0,0,0.167516265334349,0,0,0,0,0.12269149171914,0,0.542530047399471,0,0,0.157702415033935,0,0,0,0,0,0.368738337083406,0.260650843404249,0,0.343143423810856,2.06768026122887,1.2942852049117,2.02782359826544,0.303127571446259,0,0.30239029332968,0,0,0.280660094433074,0.128139149255701,0.511707249066704,0,0,0,0.177561725313127,0,0,0,0.120859449591622,0,1.65745780084613,0,0.182091168006717,0.393373244878272,0,0.231046011313244,0,0,0.211103257785751,0,0.170093705276516,0,0,0,0,0,0,0.447749509444357,1.09629938322967,2.3529190592241,0.512900250232778,0,0,0.309123034943167,0,0,0,0,0,0,0.308097234229289,0.307007349452259,0.275673144969061,0.214840489736547,0.145016693914229,0.340906509664404,0.0890320356467374,0.165284915360978,0.192190067365106,0.638063562472921,1.11273558941105,0,0.31481234683064,0,0,0,0,0.18532421910392,0.429374660225974,0,0,0.190630193923825,0,0.42793898803392,0,0,0,0.274537029736055,0.117812402345686,0,0,0,0,0.243713489631284,0,0.136499911407986,0,0,0,0,0.438450885253763,0.578775534266688,0,0.202910376962704,0,0,0.143411352204052,0,0,0.354761064070598,0.211107635297664,0,0,0.349934720244983,0.0962221127255121,0,0,0.0941438007767792,0,0,1.33029046061003,0.459446800413919,1.01489521846434,3.0585488285695,1.13929437434833,1.66762242820452,2.05681136543097,0,0.540031437238115,2.37937552888281,0.21364814225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|phase1_expression=0.181678379270557,0.214100523890983,0.281908808191942,0,0.446961094427288,0,0,0,0,0,0,0,0.263766978228454,0.123766352960047,0,0,0.602694528023977,0,0.487932798790507,0.123121058076788,0.204000691244253,0,0.286235987131057,0.273748850145768,0.376627918784408,1.83392173795083,1.14940825229924,1.96776953284198,0.393364276848904,0.383829398097213,1.70297735647684,0,0.30120591877825,0,3.25362242437267,1.9903692548239,2.05520307534393,0,0.802177789880567,0.434021741431704,0.447830948479849,1.29557466407592,1.03030227053675,0.290796477559129,0.377875943688809,0.242584061187816,0.464858073811369,0,0.309706370895104,0.575384784644301,0.512321413058201,0.236482229888585,1.37898272294647,0,1.35426486594342,0.188242339542605,1.09162460023138,0,0,0,0.639337125799041,0.329851300186716,0.398927315243264,0.852449501065388,0.290209238628584,0.56738522469114,0.622822248995575,0.251248665256743,0,0,0.605399502633369,0.368277635987565,0.316462387440884,0.211255286311942,0.637812899895131,1.25795187305026,0.561643155732475,0.901061357049038,0.48217676009124,1.14005097496499,1.19350006319454,1.0959849225878,0,1.63841583378639,2.66852776159066,3.41384178053206,2.00197993518006,2.87376219977242,0.661044872784862,2.86216126360609,2.27685187643779,2.34894875748376,2.6759125968766,2.64342657158052,1.12101712596307,1.31692042387539,1.96709770113833,1.17903228824749,2.2616164889946,1.83905144929746,2.28145586643513,1.4203434172042,1.94826728407911,0.891283655081389,1.76763544484902,0.443067789167242,2.16643091012012,1.40900451698243,1.30059347559878,1.47994114143309,1.93445012450094,1.73881851441031,2.96573126324121,1.87278579662799,2.09071047609954,1.35971211237079,1.91610246800961,2.06176467289578,2.02415753615602,2.54852331459277,1.30216690771284,2.85135613334512,2.10805166708882,1.79181255616186,2.49861453104692,2.8413270245282,3.28451198768419,2.41928091869679,1.60464117470104,2.31719046212478,0,0.670700859703636,0,0.361439152384566,0,0,0,0,0.0945348171640679,0.221729397462564,0.351339142772504,0.654895377488563,0.364295288292542,0.370784442784429,1.29818957461873,0.696518949197069,0.398873881556595,2.14641561874808,0,2.60020250930695,0,0,0,0,0,0,0.208994966536811,0,0,0,0.805658634218294,0,0,0.367663080345869,0,0.17859945656816,0,0,0,0,0,0,0,0.436094052142534,0.496971951695318,0,0.529636723252875,0,0,0,0,0.24666754841716,0,0,0.163461903113459,0,0,0.234321431833797,0.312160076830321,0,0,0.469737994575059,0.161872944368132,0.140450806702248,0,0.368502951935304,0,0,0,0,0,0,0.125118519871964,0,0,0,0.300476117813194,0,0,0,0.423863802319124,0,0.103052529238439,0,0,0.168776332241266,0,0.252433774244115,0,0.484938170456436,0,0.10075209822764,0,0.193260853163297,0.272746120590835,0,0.243947412259191,0,0,0.10366105501537,0,0,3.12899064659632,0,0,0,0,0,0.168584690078102,0,0,0.217879444092406,0,0,0,0.38474715694639,0,0,0,0,1.26755034821831,0,0,0.882926198829301,0.245976877086227,0,0.548751427043128,0,0.402115889646523,0.370353780634118,0.325808305310325,0,0,0.927443239800615,0.117408694235822,0,0.462985512576611,0,0,0,0.984868024349589,1.17002132569619,0.743155811443641,0,0.16798212819886,0,0.358234090811393,0.581267877027924,0,0.492663237895943,1.32072651019839,1.03664057770386,2.73827911492227,1.8936365013957,0.190493682876507,0,0,0,0.102827492703324,0,0,0.112131084345361,0,0.07333828582095,0.129271715757778,0,0,0,0,0.257207374262142,0,0.799266537048298,0.285955987316295,0.542621605391443,0,0.325736184293735,0,0.791951872933429,0.904318131178758,0.871533458600294,0.199945982364114,0,0,0,0.239624855491583,0,0,0,0.61642896765115,0.358121926479791,5.15591662370225,2.56139988262505,1.72502059887614,2.82354679815446,0,0,0,0.167516265334349,0,0,0,0,0.12269149171914,0,0.542530047399471,0,0,0.157702415033935,0,0,0,0,0,0.368738337083406,0.260650843404249,0,0.343143423810856,2.06768026122887,1.2942852049117,2.02782359826544,0.303127571446259,0,0.30239029332968,0,0,0.280660094433074,0.128139149255701,0.511707249066704,0,0,0,0.177561725313127,0,0,0,0.120859449591622,0,1.65745780084613,0,0.182091168006717,0.393373244878272,0,0.231046011313244,0,0,0.211103257785751,0,0.170093705276516,0,0,0,0,0,0,0.447749509444357,1.09629938322967,2.3529190592241,0.512900250232778,0,0,0.309123034943167,0,0,0,0,0,0,0.308097234229289,0.307007349452259,0.275673144969061,0.214840489736547,0.145016693914229,0.340906509664404,0.0890320356467374,0.165284915360978,0.192190067365106,0.638063562472921,1.11273558941105,0,0.31481234683064,0,0,0,0,0.18532421910392,0.429374660225974,0,0,0.190630193923825,0,0.42793898803392,0,0,0,0.274537029736055,0.117812402345686,0,0,0,0,0.243713489631284,0,0.136499911407986,0,0,0,0,0.438450885253763,0.578775534266688,0,0.202910376962704,0,0,0.143411352204052,0,0,0.354761064070598,0.211107635297664,0,0,0.349934720244983,0.0962221127255121,0,0,0.0941438007767792,0,0,1.33029046061003,0.459446800413919,1.01489521846434,3.0585488285695,1.13929437434833,1.66762242820452,2.05681136543097,0,0.540031437238115,2.37937552888281,0.21364814225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| ||
|short_description=p2@GATAD1 | |||
}} | }} |
Latest revision as of 23:44, 19 September 2015
Short description: | p2@GATAD1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_GATAD1_5end |
Coexpression cluster: | NA |
Association with transcript: | -35bp_to_NM_021167, uc003ulx.1, uc011khq.1_5end |
EntrezGene: | GATAD1 |
HGNC: | 29941 |
UniProt: | Q8WUU5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 2.78e-53 | 53 |
common lymphoid progenitor | 2.78e-53 | 53 |
lymphoid lineage restricted progenitor cell | 5.56e-52 | 52 |
hematopoietic stem cell | 4.76e-36 | 168 |
hematopoietic lineage restricted progenitor cell | 1.53e-35 | 120 |
nongranular leukocyte | 3.31e-35 | 115 |
leukocyte | 1.96e-34 | 136 |
hematopoietic cell | 5.29e-33 | 177 |
hematopoietic oligopotent progenitor cell | 4.88e-32 | 161 |
hematopoietic multipotent progenitor cell | 4.88e-32 | 161 |
T cell | 3.34e-26 | 25 |
pro-T cell | 3.34e-26 | 25 |
mature alpha-beta T cell | 5.15e-26 | 18 |
alpha-beta T cell | 5.15e-26 | 18 |
immature T cell | 5.15e-26 | 18 |
mature T cell | 5.15e-26 | 18 |
immature alpha-beta T cell | 5.15e-26 | 18 |
lymphocyte of B lineage | 3.57e-22 | 24 |
pro-B cell | 3.57e-22 | 24 |
CD8-positive, alpha-beta T cell | 6.23e-17 | 11 |
B cell | 3.01e-15 | 14 |
CD4-positive, alpha-beta T cell | 4.52e-09 | 6 |
mesenchymal cell | 2.78e-07 | 354 |
connective tissue cell | 8.68e-07 | 361 |
Ontology term | p-value | n |
---|---|---|
blood | 2.13e-08 | 15 |
haemolymphatic fluid | 2.13e-08 | 15 |
organism substance | 2.13e-08 | 15 |
hematopoietic system | 6.15e-08 | 98 |
blood island | 6.15e-08 | 98 |
hemolymphoid system | 1.01e-07 | 108 |
thymus | 1.78e-07 | 4 |
hemolymphoid system gland | 1.78e-07 | 4 |
thymic region | 1.78e-07 | 4 |
pharyngeal gland | 1.78e-07 | 4 |
thymus primordium | 1.78e-07 | 4 |