FFCP PHASE1:Hg19::chrX:152771450..152771463,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=633 | |EntrezGene=633 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1044 | |HGNC=1044 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=123bp_to_ENST00000492658_5end | |association_with_transcript=123bp_to_ENST00000492658_5end | ||
|cluster_id=chrX:152771450..152771463,+ | |||
|coexpression_cluster_id=C288 | |||
|description=CAGE_peak_19_at_BGN_5end | |description=CAGE_peak_19_at_BGN_5end | ||
|id=chrX:152771450..152771463,+ | |id=chrX:152771450..152771463,+ | ||
|ontology_enrichment_celltype=CL:0000055!5.60e-21!180;CL:0000057!1.99e-13!75;CL:0000183!1.85e-12!59;CL:0000359!4.16e-12!32;CL:0000187!1.03e-11!54;CL:0000680!1.13e-11!57;CL:0000056!1.13e-11!57;CL:0000355!1.13e-11!57;CL:0000222!2.40e-11!119;CL:0000192!1.51e-09!42;CL:0000514!1.51e-09!42;CL:0000393!2.87e-09!60;CL:0000211!2.87e-09!60 | |ontology_enrichment_celltype=CL:0000055!5.60e-21!180;CL:0000057!1.99e-13!75;CL:0000183!1.85e-12!59;CL:0000359!4.16e-12!32;CL:0000187!1.03e-11!54;CL:0000680!1.13e-11!57;CL:0000056!1.13e-11!57;CL:0000355!1.13e-11!57;CL:0000222!2.40e-11!119;CL:0000192!1.51e-09!42;CL:0000514!1.51e-09!42;CL:0000393!2.87e-09!60;CL:0000211!2.87e-09!60 | ||
|ontology_enrichment_celltype_v019=CL:0000359;3.67e-12;32!CL:0000327;1.37e-09;15!CL:0002595;2.43e-08;5!CL:0000138;1.13e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000359,4.32e-12,32;CL:0000057,2.65e-10,76;CL:0000327,1.05e-09,15;CL:0002595,9.79e-09,5;CL:0000058,8.49e-08,6;CL:0000138,8.49e-08,6;CL:0000192,8.81e-08,43;CL:0000514,8.81e-08,43;CL:0000187,1.78e-07,55;CL:0000222,4.99e-07,121;CL:0000048,5.24e-07,427;CL:0000680,7.97e-07,58;CL:0000056,7.97e-07,58;CL:0000355,7.97e-07,58 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002049!8.68e-23!79;UBERON:0007798!8.68e-23!79;UBERON:0004872!2.45e-22!84;UBERON:0000055!9.81e-22!69;UBERON:0001981!7.17e-20!60;UBERON:0007500!7.17e-20!60;UBERON:0004537!7.17e-20!60;UBERON:0006965!7.17e-20!60;UBERON:0001009!1.66e-19!113;UBERON:0004535!3.10e-19!110;UBERON:0001637!4.24e-19!42;UBERON:0003509!4.24e-19!42;UBERON:0004572!4.24e-19!42;UBERON:0004573!8.58e-15!33;UBERON:0004571!8.58e-15!33;UBERON:0003914!5.93e-12!118;UBERON:0002385!2.43e-11!63;UBERON:0001015!2.43e-11!63;UBERON:0000383!2.43e-11!63;UBERON:0001134!5.16e-11!61;UBERON:0002036!5.16e-11!61;UBERON:0003082!5.16e-11!61;UBERON:0000947!5.96e-10!21;UBERON:0010191!5.96e-10!21;UBERON:0000477!6.11e-10!286;UBERON:0000914!8.60e-10!83;UBERON:0002329!8.60e-10!83;UBERON:0003077!8.60e-10!83;UBERON:0003059!8.60e-10!83;UBERON:0007282!8.60e-10!83;UBERON:0009618!8.60e-10!83;UBERON:0007285!8.60e-10!83;UBERON:0004290!1.65e-09!70;UBERON:0004111!5.09e-09!241;UBERON:0000025!8.54e-08!194;UBERON:0000486!8.67e-08!82;UBERON:0003513!2.31e-07!8;UBERON:0007100!5.86e-07!27;UBERON:0000948!8.17e-07!24;UBERON:0005498!8.17e-07!24;UBERON:0004140!8.17e-07!24;UBERON:0009881!8.17e-07!24;UBERON:0004141!8.17e-07!24;UBERON:0003084!8.17e-07!24;UBERON:0007005!8.17e-07!24;UBERON:0004139!8.17e-07!24;UBERON:0004291!8.17e-07!24;UBERON:0000490!9.51e-07!138 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;7.69e-17;33!UBERON:0004571;7.69e-17;33!UBERON:0001637;8.79e-17;42!UBERON:0003509;8.79e-17;42!UBERON:0004572;8.79e-17;42!UBERON:0000947;7.55e-11;21!UBERON:0010191;7.55e-11;21!UBERON:0003513;1.30e-10;7!UBERON:0007500;6.61e-09;56!UBERON:0001981;6.61e-09;56!UBERON:0004537;6.61e-09;56!UBERON:0003834;2.43e-08;5!UBERON:0001533;2.43e-08;5!UBERON:0000055;1.16e-07;65 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001637,2.26e-19,42;UBERON:0003509,2.26e-19,42;UBERON:0004572,2.26e-19,42;UBERON:0004573,9.08e-19,33;UBERON:0004571,9.08e-19,33;UBERON:0007500,8.43e-18,59;UBERON:0001981,8.43e-18,59;UBERON:0004537,8.43e-18,59;UBERON:0006965,8.43e-18,59;UBERON:0002049,1.23e-16,78;UBERON:0007798,1.23e-16,78;UBERON:0004872,1.66e-16,83;UBERON:0000055,1.96e-16,68;UBERON:0001009,1.42e-14,112;UBERON:0004535,2.09e-14,109;UBERON:0003513,5.33e-11,7;UBERON:0000947,1.27e-10,21;UBERON:0010191,1.27e-10,21;UBERON:0003914,2.05e-10,117;UBERON:0003834,9.79e-09,5;UBERON:0001533,9.79e-09,5;UBERON:0007524,3.62e-07,73;UBERON:0001134,6.44e-07,62;UBERON:0002036,6.44e-07,62;UBERON:0003082,6.44e-07,62;UBERON:0002329,7.34e-07,71;UBERON:0003059,7.34e-07,71;UBERON:0007282,7.34e-07,71;UBERON:0004290,7.34e-07,71;UBERON:0009618,7.34e-07,71 | |||
|phase1_expression=0.54503513781167,1.71280419112787,0.281908808191942,2.00146596706261,1.34088328328186,1.74467704820074,0,0,0,0,0,0,0,0.74259811776028,0.331397375727916,0.672325146451775,1.20538905604795,2.19093027116212,3.90346239032406,0.246242116153576,1.22400414746552,0.626909442956176,0,0,0.502170558379211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.511450247374121,2.53007406669196,3.00802746381534,1.73815822752988,7.15757352345989,13.6257763684738,0,0,0.175669571386252,0.458426764241994,0,0,0,0,0,0,0,0,0.79504962946682,0.860234595106124,1.38856200643038,1.13061588384802,0.838998872419812,1.10047216776027,1.8809546988313,0.516833518338658,0,1.00416183829401,0,0,1.22031028774085,0,3.24056779152704,0.357198913136319,0.22452937262617,0.112611480483322,0,0,0.549605231791222,0,0,0,2.98183171017191,3.29239330327907,0.529636723252875,8.3182620017156,1.06400514659507,2.24271040056923,6.4049397437823,1.48000529050296,0,2.2900814251847,0.980771418680752,3.48122083583342,1.72852777344,0.234321431833797,0,0,0,0,0,0,0,0,0.206651562351531,0,1.97813543422845,0.910161361938026,0.718618141816238,0,0,0,0.438977620880838,0.612975591598039,0.901428353439581,0.453728732640084,0.717558542755448,1.49490172172997,1.90738711043606,1.80054657650641,0.92747276314595,0.515281080091258,1.67505170698431,1.35021065793013,2.53336213419116,1.51460264546469,0.920498986422993,2.42469085228218,3.90510551768276,1.20902517873168,0.508681776931463,0,0,0,0,0,0,0,0,0,1.56449532329816,5.14592750554308,0,2.78620756819187,0,0,0,0,0,0,0,0,0,0,1.4763109092493,1.40241773803446,0.8231480226628,0,0,0,0.590789906681404,0,0.122988438543114,0.343135620597051,0,0,0,0,0,0,0,0,0.469634776943287,0.866198686566443,0.462985512576611,1.33177906564219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.56983518083505,1.74384027533312,2.86019314701705,0.517086863031111,3.57656445851882,0.845302752556,0.531876233169741,0,0.771622122786426,0,0.266422179016099,0,1.08524321078289,0,0,0,0,0,0,0,0,0,0,2.63587341040741,2.29723871668228,0,0,0.410952645100767,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,2.20844685094452,3.00102312635806,0,7.48695101510906,11.7763132606127,5.20417969611984,3.04567678981054,1.20378439891088,6.82222512167955,5.17365356462525,1.99267679560631,2.02806085395873,0.0868836144680828,11.356467132839,9.95115929051482,0,0,0,0,0,0.604780586659361,0.496215615637554,0.920771839728375,5.05188169979532,0.896974044789907,1.02341449813341,2.57366273829772,0,1.3878872442239,0.710246901252508,0.246381468041427,1.55776328755086,1.16210378459959,0.362578348774867,0,0,0,0.546273504020151,0.131124414959424,0,0,0,0,0,0,0,0.215915916102139,16.9649977959318,0,0.501689773854853,0,0,0,0,0,0,0.328014645699706,0,0.515205058238611,0,0,0,0,0,1.16004861950546,0.462145851343933,1.38153307253517,0.689182862422653,0.644521469209642,0.580066775656914,0.511359764496605,2.22580089116843,0,0,0,0,0.464845549297286,4.09256050879832,0,1.54016790088044,1.59691809095107,0,1.11194531462352,0.429374660225974,1.86079184679834,0.316379424718726,0.190630193923825,0,0.42793898803392,0,5.49464048139461,0.179872457583315,0.274537029736055,0,1.01091240786658,3.17020642346017,0,0,1.46228093778771,4.22600587027022,0.136499911407986,0,1.13008116620243,1.65409603063837,1.99031692572366,5.26141062304515,0.578775534266688,0,0.811641507850816,0.30982349809975,1.97186921772569,0,0.0982490410131212,0.7133421029625,0,1.05553817648832,0.987884678879706,0,0,0,0,0,0.753150406214233,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.562677665642051,0,0,0.422250816255987,10.1616474008046,0,0,0,0,0.933118762985422,0,0,0,0.690503839458535,0,0,0,0.185536196323703,0,0,0,1.44999915086959,0,0,0,0,0,0,0,0,0,0.221158519862449,0,0,0,0,0.615602068030377,0,0,0,0.108647371922008,0,0.366390373607449,1.06606955203727,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0.269604531922708,0,0.234264445725339,0,0,0,0.394584402849391,0,0,0.947798694427319,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0.387956065953678,0,1.58186518546373,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0.235694034616795,0,0,0,0,0,0,0,0,0,3.35138881526705,1.60412296808179,0,0.199679000498991,1.28767814440971,0,0.201550417460179,2.16179930125442,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157611414598396,0.262272940674991,0,0,0,2.85878130549347,0,0,0,0,0,0,0,0,1.13312091520126,0,0,0,0.26446520348538,0,0,0.427149650270779,0.78602152549833,0.414239055347196,0.496166021811951,0,0,0,0,0,0,0,0,0,0.244052529803926,0.250381861413,0,0.110929051536852,0.0620964029413835,0,0,0,0,0.235265819698172,0,0,0.597019211547496,2.57084640831947,1.10961172300523,0.189403005275089,0.50313580350515,0,0.228840068396924,0.453692771289717,1.5543720058278,0.73927574994817,0,0,0,1.65882483136342,0.797525143673985,1.5652351854352,1.35231848097497,0,0.406870733204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| ||
|short_description=p19@BGN | |short_description=p19@BGN | ||
}} | }} |
Latest revision as of 23:51, 19 September 2015
Short description: | p19@BGN |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_19_at_BGN_5end |
Coexpression cluster: | C288_Chondrocyte_Renal_Pericytes_Fibroblast_aorta_Smooth_Meningeal |
Association with transcript: | 123bp_to_ENST00000492658_5end |
EntrezGene: | BGN |
HGNC: | 1044 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 4.32e-12 | 32 |
fibroblast | 2.65e-10 | 76 |
extracellular matrix secreting cell | 1.05e-09 | 15 |
smooth muscle cell of the subclavian artery | 9.79e-09 | 5 |
chondroblast | 8.49e-08 | 6 |
chondrocyte | 8.49e-08 | 6 |
smooth muscle cell | 8.81e-08 | 43 |
smooth muscle myoblast | 8.81e-08 | 43 |
muscle cell | 1.78e-07 | 55 |
mesodermal cell | 4.99e-07 | 121 |
multi fate stem cell | 5.24e-07 | 427 |
muscle precursor cell | 7.97e-07 | 58 |
myoblast | 7.97e-07 | 58 |
multi-potent skeletal muscle stem cell | 7.97e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
artery | 2.26e-19 | 42 |
arterial blood vessel | 2.26e-19 | 42 |
arterial system | 2.26e-19 | 42 |
systemic artery | 9.08e-19 | 33 |
systemic arterial system | 9.08e-19 | 33 |
epithelial tube open at both ends | 8.43e-18 | 59 |
blood vessel | 8.43e-18 | 59 |
blood vasculature | 8.43e-18 | 59 |
vascular cord | 8.43e-18 | 59 |
vasculature | 1.23e-16 | 78 |
vascular system | 1.23e-16 | 78 |
splanchnic layer of lateral plate mesoderm | 1.66e-16 | 83 |
vessel | 1.96e-16 | 68 |
circulatory system | 1.42e-14 | 112 |
cardiovascular system | 2.09e-14 | 109 |
trunk blood vessel | 5.33e-11 | 7 |
aorta | 1.27e-10 | 21 |
aortic system | 1.27e-10 | 21 |
epithelial tube | 2.05e-10 | 117 |
thoracic segment blood vessel | 9.79e-09 | 5 |
subclavian artery | 9.79e-09 | 5 |
dense mesenchyme tissue | 3.62e-07 | 73 |
skeletal muscle tissue | 6.44e-07 | 62 |
striated muscle tissue | 6.44e-07 | 62 |
myotome | 6.44e-07 | 62 |
somite | 7.34e-07 | 71 |
presomitic mesoderm | 7.34e-07 | 71 |
presumptive segmental plate | 7.34e-07 | 71 |
dermomyotome | 7.34e-07 | 71 |
trunk paraxial mesoderm | 7.34e-07 | 71 |