FFCP PHASE1:Hg19::chr14:39572307..39572340,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DPIdataset= | |DHSsupport=supported | ||
|DPIdataset=robust | |||
|EntrezGene=10484 | |EntrezGene=10484 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC=10701 | |HGNC=10701 | ||
|TSSclassifier= | |TSSclassifier=strong | ||
|UniProt=F5H6C4 | |UniProt=F5H6C4 | ||
|association_with_transcript=-28bp_to_ENST00000536508_5end | |association_with_transcript=-28bp_to_ENST00000536508_5end | ||
|cluster_id=chr14:39572307..39572340,- | |||
|description=CAGE_peak_2_at_SEC23A_5end | |description=CAGE_peak_2_at_SEC23A_5end | ||
|id=chr14:39572307..39572340,- | |id=chr14:39572307..39572340,- |
Latest revision as of 23:58, 19 September 2015
Short description: | p2@SEC23A |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_SEC23A_5end |
Coexpression cluster: | NA |
Association with transcript: | -28bp_to_ENST00000536508_5end |
EntrezGene: | SEC23A |
HGNC: | 10701 |
UniProt: | F5H6C4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p2@SEC23A |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.68e-20 | 76 |
muscle precursor cell | 7.75e-19 | 58 |
myoblast | 7.75e-19 | 58 |
multi-potent skeletal muscle stem cell | 7.75e-19 | 58 |
muscle cell | 1.52e-17 | 55 |
mesodermal cell | 1.31e-15 | 121 |
electrically responsive cell | 2.21e-15 | 61 |
electrically active cell | 2.21e-15 | 61 |
smooth muscle cell | 2.63e-15 | 43 |
smooth muscle myoblast | 2.63e-15 | 43 |
Showing 1 to 10 of 16 entries
Ontology term | p-value | n |
---|---|---|
unilaminar epithelium | 5.54e-21 | 148 |
mesenchyme | 4.74e-20 | 160 |
entire embryonic mesenchyme | 4.74e-20 | 160 |
trunk mesenchyme | 5.68e-20 | 122 |
dense mesenchyme tissue | 7.15e-20 | 73 |
somite | 9.12e-20 | 71 |
presomitic mesoderm | 9.12e-20 | 71 |
presumptive segmental plate | 9.12e-20 | 71 |
dermomyotome | 9.12e-20 | 71 |
trunk paraxial mesoderm | 9.12e-20 | 71 |
Showing 1 to 10 of 55 entries