FFCP PHASE1:Hg19::chr11:71640112..71640119,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr11:71640112..71640119,+ to FFCP PHASE1:Hg19::chr11:71640112..71640119,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=55298 | |EntrezGene=55298 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21070 | |HGNC=21070 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-2bp_to_ENST00000525243_5end | |||
|cluster_id=chr11:71640112..71640119,+ | |||
|description=CAGE_peak_3_at_RNF121_5end | |||
|id=chr11:71640112..71640119,+ | |||
|ontology_enrichment_celltype=CL:0000071!1.98e-15!18;CL:0002546!1.98e-15!18;CL:0002139!6.64e-12!24;CL:1000413!8.69e-12!9;CL:0000076!2.15e-08!62;CL:0002544!2.41e-07!6;CL:0000115!8.66e-07!35 | |||
|ontology_enrichment_celltype_v019=CL:1000413;1.95e-59;9!CL:0000071;1.32e-48;18!CL:0002139;3.17e-36;24!CL:0002544;5.91e-30;6!CL:0001014;8.00e-24;2!CL:0001016;8.00e-24;2!CL:0000115;2.11e-22;36!CL:0002078;1.54e-13;45!CL:0000213;3.60e-13;58!CL:0000215;3.60e-13;58!CL:0000511;2.75e-12;1!CL:0002625;2.75e-12;1!CL:0000216;2.75e-12;1!CL:0000453;4.15e-10;5!CL:0000076;7.07e-09;63!CL:0000840;1.44e-08;5!CL:0002543;2.25e-08;6!CL:0002545;4.82e-07;2!CL:0002596;6.24e-07;2!CL:0002589;9.01e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:1000413,1.11e-59,9;CL:0000071,8.23e-49,18;CL:0002546,8.23e-49,18;CL:0002139,2.23e-36,24;CL:0002544,7.40e-30,6;CL:0000115,6.35e-24,36;CL:0001014,8.98e-24,2;CL:0001016,8.98e-24,2;CL:0002078,6.24e-19,45;CL:0000213,7.33e-18,58;CL:0000215,7.33e-18,58;CL:0000076,2.43e-16,63;CL:0000222,1.17e-13,121;CL:0000511,1.96e-12,1;CL:0002625,1.96e-12,1;CL:0000216,1.96e-12,1;CL:0000453,4.35e-10,5;CL:0000840,1.50e-08,5;CL:0001029,1.50e-08,5;CL:0002543,2.09e-08,6;CL:0002321,8.99e-08,250;CL:0002545,4.83e-07,2;CL:0002596,6.42e-07,2;CL:0002589,8.06e-07,2 | |||
|ontology_enrichment_development_v019=CL:0002546;1.32e-48;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001986!1.98e-15!18;UBERON:0004638!1.98e-15!18;UBERON:0004852!1.98e-15!18;UBERON:0000487!7.47e-14!22;UBERON:0003915!8.69e-12!9;UBERON:0004700!8.69e-12!9;UBERON:0001917!8.69e-12!9;UBERON:0006914!1.30e-11!25;UBERON:0001981!1.49e-09!60;UBERON:0007500!1.49e-09!60;UBERON:0004537!1.49e-09!60;UBERON:0006965!1.49e-09!60;UBERON:0004872!4.55e-09!84;UBERON:0000055!6.63e-09!69;UBERON:0002049!1.79e-07!79;UBERON:0007798!1.79e-07!79;UBERON:0004535!3.46e-07!110;UBERON:0001009!9.20e-07!113 | |||
|ontology_enrichment_uberon_v019=UBERON:0003915;1.95e-59;9!UBERON:0004700;1.95e-59;9!UBERON:0001917;1.95e-59;9!UBERON:0000487;8.25e-49;22!UBERON:0004638;1.32e-48;18!UBERON:0001986;1.32e-48;18!UBERON:0004852;1.32e-48;18!UBERON:0006914;8.06e-43;25!UBERON:0000490;1.79e-33;33!UBERON:0001637;7.18e-22;42!UBERON:0003509;7.18e-22;42!UBERON:0004572;7.18e-22;42!UBERON:0007500;9.12e-19;56!UBERON:0001981;9.12e-19;56!UBERON:0004537;9.12e-19;56!UBERON:0004573;2.10e-14;33!UBERON:0004571;2.10e-14;33!UBERON:0001136;2.75e-12;1!UBERON:0001343;2.75e-12;1!UBERON:0004910;2.75e-12;1!UBERON:0004813;2.75e-12;1!UBERON:0000055;4.18e-12;65!UBERON:0000947;9.49e-09;21!UBERON:0010191;9.49e-09;21!UBERON:0003914;5.12e-08;74!UBERON:0005800;4.82e-07;2!UBERON:0001515;4.82e-07;2!UBERON:0000025;5.35e-07;93!UBERON:0005396;6.24e-07;2!UBERON:0004909;9.01e-07;2!UBERON:0001529;9.01e-07;2!UBERON:0007204;9.01e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003915,1.11e-59,9;UBERON:0004700,1.11e-59,9;UBERON:0001917,1.11e-59,9;UBERON:0000487,4.62e-49,22;UBERON:0004638,8.23e-49,18;UBERON:0001986,8.23e-49,18;UBERON:0004852,8.23e-49,18;UBERON:0006914,4.84e-43,25;UBERON:0007500,2.33e-25,59;UBERON:0001981,2.33e-25,59;UBERON:0004537,2.33e-25,59;UBERON:0006965,2.33e-25,59;UBERON:0001637,5.11e-25,42;UBERON:0003509,5.11e-25,42;UBERON:0004572,5.11e-25,42;UBERON:0000055,8.59e-22,68;UBERON:0004872,9.65e-21,83;UBERON:0002049,8.63e-19,78;UBERON:0007798,8.63e-19,78;UBERON:0004573,8.88e-16,33;UBERON:0004571,8.88e-16,33;UBERON:0004535,5.69e-13,109;UBERON:0001009,1.41e-12,112;UBERON:0001136,1.96e-12,1;UBERON:0001343,1.96e-12,1;UBERON:0004910,1.96e-12,1;UBERON:0005154,1.96e-12,1;UBERON:0005295,1.96e-12,1;UBERON:0004813,1.96e-12,1;UBERON:0005297,1.96e-12,1;UBERON:0005294,1.96e-12,1;UBERON:0010141,1.96e-12,1;UBERON:0005891,1.96e-12,1;UBERON:0003914,5.73e-12,117;UBERON:0000490,7.96e-11,148;UBERON:0003081,3.35e-10,203;UBERON:0000947,1.01e-08,21;UBERON:0010191,1.01e-08,21;UBERON:0005800,4.83e-07,2;UBERON:0001515,4.83e-07,2;UBERON:0004111,5.35e-07,240;UBERON:0005396,6.42e-07,2;UBERON:0004909,7.61e-07,2;UBERON:0001529,8.06e-07,2;UBERON:0007204,8.06e-07,2 | |||
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| ||
|short_description=p3@RNF121 | |||
}} | }} |
Latest revision as of 23:59, 19 September 2015
Short description: | p3@RNF121 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_RNF121_5end |
Coexpression cluster: | NA |
Association with transcript: | -2bp_to_ENST00000525243_5end |
EntrezGene: | RNF121 |
HGNC: | 21070 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of artery | 1.11e-59 | 9 |
blood vessel endothelial cell | 8.23e-49 | 18 |
embryonic blood vessel endothelial progenitor cell | 8.23e-49 | 18 |
endothelial cell of vascular tree | 2.23e-36 | 24 |
aortic endothelial cell | 7.40e-30 | 6 |
endothelial cell | 6.35e-24 | 36 |
CD1a-positive Langerhans cell | 8.98e-24 | 2 |
immature CD1a-positive Langerhans cell | 8.98e-24 | 2 |
meso-epithelial cell | 6.24e-19 | 45 |
lining cell | 7.33e-18 | 58 |
barrier cell | 7.33e-18 | 58 |
squamous epithelial cell | 2.43e-16 | 63 |
mesodermal cell | 1.17e-13 | 121 |
androgen binding protein secreting cell | 1.96e-12 | 1 |
seminiferous tubule epithelial cell | 1.96e-12 | 1 |
Sertoli cell | 1.96e-12 | 1 |
Langerhans cell | 4.35e-10 | 5 |
immature conventional dendritic cell | 1.50e-08 | 5 |
common dendritic progenitor | 1.50e-08 | 5 |
vein endothelial cell | 2.09e-08 | 6 |
embryonic cell | 8.99e-08 | 250 |
thoracic aorta endothelial cell | 4.83e-07 | 2 |
smooth muscle cell of the carotid artery | 6.42e-07 | 2 |
smooth muscle cell of the brachiocephalic vasculature | 8.06e-07 | 2 |