FFCP PHASE1:Hg19::chr3:122513665..122513679,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr3:122513665..122513679,+ to FFCP PHASE1:Hg19::chr3:122513665..122513679,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=84925 | |EntrezGene=84925 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16628 | |HGNC=16628 | ||
|TSSclassifier=strong | |||
|UniProt=Q96SL1 | |UniProt=Q96SL1 | ||
|association_with_transcript=23bp_to_ENST00000261038_5end | |||
|cluster_id=chr3:122513665..122513679,+ | |||
|coexpression_cluster_id=C26 | |||
|description=CAGE_peak_3_at_DIRC2_5end | |||
|id=chr3:122513665..122513679,+ | |||
|ontology_enrichment_celltype=CL:0000766!5.16e-35!76;CL:0000860!2.10e-33!45;CL:0002009!5.07e-33!65;CL:0002057!1.91e-32!42;CL:0002194!7.38e-32!63;CL:0000576!7.38e-32!63;CL:0000040!7.38e-32!63;CL:0000559!7.38e-32!63;CL:0000839!2.48e-29!70;CL:0000557!2.61e-29!71;CL:0000738!4.75e-24!140;CL:0002087!1.34e-21!119;CL:0002031!1.15e-20!124;CL:0000763!4.36e-17!112;CL:0000049!4.36e-17!112;CL:0000037!5.51e-14!172;CL:0000566!5.51e-14!172;CL:0002032!2.15e-13!165;CL:0000837!2.15e-13!165;CL:0000988!1.37e-11!182;CL:0002393!1.54e-07!9;CL:0002397!1.54e-07!9;CL:0000094!1.83e-07!8 | |||
|ontology_enrichment_celltype_v019=CL:0000860;3.47e-58;33!CL:0002057;3.47e-58;33!CL:0000576;2.25e-49;48!CL:0000473;1.24e-47;39!CL:0000234;1.24e-47;39!CL:0000766;5.75e-36;69!CL:0000094;2.06e-16;8!CL:0000763;5.14e-16;100!CL:0002087;5.30e-16;104!CL:0000738;1.25e-13;136!CL:0002393;1.30e-11;6!CL:0002397;1.30e-11;6!CL:0000081;1.94e-11;11!CL:0000775;8.49e-08;3!CL:0000988;1.14e-07;177 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,3.33e-82,72;CL:0000860,7.78e-80,42;CL:0002057,7.78e-80,42;CL:0000473,1.90e-78,48;CL:0000234,1.90e-78,48;CL:0002009,5.65e-77,61;CL:0002194,4.94e-74,59;CL:0000576,4.94e-74,59;CL:0000040,4.94e-74,59;CL:0000559,4.94e-74,59;CL:0000557,1.07e-68,67;CL:0000839,1.37e-64,66;CL:0000738,2.12e-53,136;CL:0000763,9.29e-53,108;CL:0000049,9.29e-53,108;CL:0002087,2.39e-45,115;CL:0002031,8.41e-41,120;CL:0000037,1.89e-39,168;CL:0002032,1.50e-37,161;CL:0000837,1.50e-37,161;CL:0000988,1.93e-36,177;CL:0002393,1.30e-16,9;CL:0002397,1.30e-16,9;CL:0000094,2.01e-16,8;CL:0000081,1.91e-11,11;CL:0000134,5.97e-10,354;CL:0002320,2.01e-09,361;CL:0000775,8.42e-08,3;CL:0000219,1.35e-07,386 | |||
|ontology_enrichment_development_v019=CL:0002057;7.20e-57;42!CL:0000049;8.38e-16;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.04e-26!102;UBERON:0003061!1.04e-26!102;UBERON:0002193!2.77e-24!112;UBERON:0002371!1.57e-22!80;UBERON:0001474!6.36e-19!86;UBERON:0004765!5.78e-16!101;UBERON:0001434!5.78e-16!101;UBERON:0002405!3.48e-14!115;UBERON:0003081!2.15e-07!216 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.90e-10;15!UBERON:0000179;1.90e-10;15!UBERON:0000463;1.90e-10;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,7.34e-63,98;UBERON:0003061,7.34e-63,98;UBERON:0002371,1.04e-58,76;UBERON:0002193,2.35e-55,108;UBERON:0001474,2.89e-53,82;UBERON:0004765,3.93e-47,90;UBERON:0002405,4.20e-45,93;UBERON:0001434,7.59e-41,100;UBERON:0003081,3.70e-26,203;UBERON:0002204,2.22e-21,167;UBERON:0000926,6.89e-15,315;UBERON:0004120,6.89e-15,315;UBERON:0006603,6.89e-15,315;UBERON:0000178,1.84e-10,15;UBERON:0000179,1.84e-10,15;UBERON:0000463,1.84e-10,15;UBERON:0002384,1.04e-08,371 | |||
|phase1_expression=0.54503513781167,0.428201047781966,0.281908808191942,1.0007329835313,0,0,0,0,0,0,0,0.218441372130172,0,0.74259811776028,0.331397375727916,0,0,0,0,0.123121058076788,0,0,0,0,0,0,0,0,3.54027849164014,3.0706351847777,7.43117391917165,0,0.6024118375565,0,0,0,0,7.20194031091441,5.81578897663411,4.55722828503289,2.91090116511902,1.6194683300949,1.28787783817093,15.703009788193,21.9168047339509,11.886618998203,13.7133131774354,15.6243797448294,9.60089749774821,12.9461576544968,15.6258030982751,15.1348627128695,21.718977886407,12.2642089880927,9.47985406160392,17.130052898377,20.7408674043963,14.1575795200403,21.1197885735923,24.3906060577831,18.5407766481722,15.5030111087757,23.3372479417309,16.1965405202424,16.5419266018293,9.64554881974938,12.4564449799115,17.587406567972,16.1659704710262,18.4610517999349,14.5295880632009,13.9945501675275,11.3926459478718,6.76016916198214,9.14198489849687,7.33805259279316,11.4575203769425,12.464682105845,7.71482816145985,8.55038231223746,8.75233379675996,5.66258876670365,0,1.09227722252426,0,0.426730222566507,0.800791974072025,1.14950487990897,0,0.954053754535364,15.3687501659551,4.69789751496751,9.55683070313072,0,1.12101712596307,0.263384084775077,0.196709770113833,0,0.205601498999509,0.334372990781356,0.651844533267181,0.946895611469467,0,0,0.883817722424512,0.886135578334485,0.270803863765016,0.128091319725675,0,0,0.276350017785848,0,0.296573126324121,0,0,0,0.383220493601921,0.34362744548263,0.506039384039006,0,0,0.950452044448374,0.451725357233318,0,0,1.18388626022008,0,0.403213486449465,0.534880391567015,0.289648807765598,0,0,0,0.361439152384566,1.00267582127178,0.724232594804119,0,0.486634870302636,0.189069634328136,0.221729397462564,0.087834785693126,0.523916301990851,0,0.370784442784429,1.29818957461873,0.348259474598534,2.26028532882071,0.476981248610684,0.571994910780128,0,0,0,0.347140501607594,0,0,0,0,0.258416759169329,0,0,0,0,0,0,0,0.0892997282840798,0.22452937262617,0,0,0,0,30.3094960102945,15.511210565933,0,0.496971951695318,0,0.264818361626438,0.573673241497627,0,0,0,0.24666754841716,0,0,0,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0.206651562351531,0,0.247266929278557,0,0,0,0.125118519871964,0,0,0,0.300476117813194,0,0.538168907066586,0,0,0,0.103052529238439,0.515281080091258,0,0.168776332241266,0.0974370051611986,0,0.0920498986422993,0.161646056818812,0.355009592516614,0,0.169560592310488,0,0.545492241181669,0.286804595389004,0,0,0,0,0,0,0,0,0,0.464367928031979,0,0.828147600278907,0.337169380156203,0.482022059766964,0.882351781859152,0.653638332277218,0.474541238222193,1.48314438976181,1.17732879075208,1.92373578473195,0,0,0,0,0,0,0,0,0.737930631258681,0.171567810298526,0.548751427043128,0,0.100528972411631,0.0925884451585296,0,0,0,0.115930404975077,0,0.288732895522148,0,0,0,0,2.95460407304877,0,0.445893486866185,0,0.16798212819886,0.141775097242386,0.53735113621709,0.290633938513962,0,0,0,0.207328115540772,0.288239906833923,0,0,0,0,0,0,0,0,0.224262168690721,0.43596006883328,0.22001485746285,0,0,0,0.531876233169741,0,0,0,0,0,0,0,0,0,0,0,0,0.199945982364114,4.86495122564762,2.00902836572851,0,0,0,0,0.144781306667579,0,0,0,0.197030760201927,0.431255149719035,0.898401253958239,0,0,0,0,0,30.7092879818345,32.9077605124427,43.5136289107837,0.36807447515742,0.500170521059677,0.271265023699736,0.207970861530807,0.178428988797162,0.315404830067869,0,0,0,0,0,0.184369168541703,0.0868836144680828,0,0,3.10152039184331,5.60856922128404,2.34800627167578,0.303127571446259,0,0,0.248107807818777,0.306923946576125,0.280660094433074,0.768834895534206,0.511707249066704,0,0,0,0,0,0,0,0.241718899183244,0.200506470303285,0.644566922551274,0.114814448164607,0.546273504020151,0.524497659837696,0.451199612907412,0.308061348417659,0,0,0.105551628892876,0,0,0,0,0,0,0.509752546090077,0,0,0.438519753291869,0.261435451024901,0,0.328014645699706,0,1.54561517471583,0,0,0.574265537996172,0,0,0.096670718292122,0,0,0,0,0,0.0852266274161009,0,0.330569830721956,0,0.893288987462089,0.4046311234222,0,0.62962469366128,0,0,0,0,0.18532421910392,0,0,0.632758849437452,0,0,0,0.318203247925937,0,0.539617372749944,0.274537029736055,0.235624804691373,0.202182481573316,0,0,0,0,0,0.409499734223957,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0,0,0,0.422215270595328,0,0,0,0.288666338176536,0,0,1.41215701165169,0,0,1.33029046061003,0.689170200620878,3.04468565539302,0.764637207142375,2.27858874869665,3.33524485640905,1.64544909234478,4.53931317834902,4.32025149790492,0,0,0,0,0,0,0,0,0,0.191505370132367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.879049075631364,0,0,0,0.23874448473769,0,0.307160702099232,0,0.140669416410513,0.111308705022906,0,0,1.19548792950642,0,0,0.102268682502155,0.123084805461069,0,0.0898683511473268,2.50629644545853,0,2.36744173528641,2.3948309234694,0,0,0.0927680981618513,0,0,0,0,0.682760689712998,0,0.236387681767936,0,0,0,0,0,0,0,0,0.438770794307945,1.85195387982283,0.975966209950223,0.384751292518985,0.113942055847001,0.23056390438806,0.628303510868405,1.19512109114209,0,0.3663903736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| ||
|short_description=p3@DIRC2 | |||
}} | }} |
Latest revision as of 00:26, 20 September 2015
Short description: | p3@DIRC2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_DIRC2_5end |
Coexpression cluster: | C26_Eosinophils_Neutrophils_CD14_CD14CD16_Basophils_Monocytederived_Whole |
Association with transcript: | 23bp_to_ENST00000261038_5end |
EntrezGene: | DIRC2 |
HGNC: | 16628 |
UniProt: | Q96SL1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 3.33e-82 | 72 |
classical monocyte | 7.78e-80 | 42 |
CD14-positive, CD16-negative classical monocyte | 7.78e-80 | 42 |
defensive cell | 1.90e-78 | 48 |
phagocyte | 1.90e-78 | 48 |
macrophage dendritic cell progenitor | 5.65e-77 | 61 |
monopoietic cell | 4.94e-74 | 59 |
monocyte | 4.94e-74 | 59 |
monoblast | 4.94e-74 | 59 |
promonocyte | 4.94e-74 | 59 |
granulocyte monocyte progenitor cell | 1.07e-68 | 67 |
myeloid lineage restricted progenitor cell | 1.37e-64 | 66 |
leukocyte | 2.12e-53 | 136 |
myeloid cell | 9.29e-53 | 108 |
common myeloid progenitor | 9.29e-53 | 108 |
nongranular leukocyte | 2.39e-45 | 115 |
hematopoietic lineage restricted progenitor cell | 8.41e-41 | 120 |
hematopoietic stem cell | 1.89e-39 | 168 |
hematopoietic oligopotent progenitor cell | 1.50e-37 | 161 |
hematopoietic multipotent progenitor cell | 1.50e-37 | 161 |
hematopoietic cell | 1.93e-36 | 177 |
intermediate monocyte | 1.30e-16 | 9 |
CD14-positive, CD16-positive monocyte | 1.30e-16 | 9 |
granulocyte | 2.01e-16 | 8 |
blood cell | 1.91e-11 | 11 |
mesenchymal cell | 5.97e-10 | 354 |
connective tissue cell | 2.01e-09 | 361 |
neutrophil | 8.42e-08 | 3 |
motile cell | 1.35e-07 | 386 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 7.34e-63 | 98 |
blood island | 7.34e-63 | 98 |
bone marrow | 1.04e-58 | 76 |
hemolymphoid system | 2.35e-55 | 108 |
bone element | 2.89e-53 | 82 |
skeletal element | 3.93e-47 | 90 |
immune system | 4.20e-45 | 93 |
skeletal system | 7.59e-41 | 100 |
lateral plate mesoderm | 3.70e-26 | 203 |
musculoskeletal system | 2.22e-21 | 167 |
mesoderm | 6.89e-15 | 315 |
mesoderm-derived structure | 6.89e-15 | 315 |
presumptive mesoderm | 6.89e-15 | 315 |
blood | 1.84e-10 | 15 |
haemolymphatic fluid | 1.84e-10 | 15 |
organism substance | 1.84e-10 | 15 |
connective tissue | 1.04e-08 | 371 |