FFCP PHASE1:Hg19::chr18:56338727..56338743,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr18:56338727..56338743,+ to FFCP PHASE1:Hg19::chr18:56338727..56338743,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=10892 | |EntrezGene=10892 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6819 | |HGNC=6819 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-67bp_to_ENST00000345724_5end | |||
|cluster_id=chr18:56338727..56338743,+ | |||
|coexpression_cluster_id=C1444 | |||
|description=CAGE_peak_3_at_MALT1_5end | |||
|id=chr18:56338727..56338743,+ | |||
|ontology_enrichment_celltype=CL:0002087!1.18e-34!119;CL:0000738!2.21e-34!140;CL:0002031!3.68e-30!124;CL:0002057!3.07e-23!42;CL:0000860!3.54e-23!45;CL:0000037!4.26e-23!172;CL:0000566!4.26e-23!172;CL:0000988!1.34e-21!182;CL:0002032!9.11e-21!165;CL:0000837!9.11e-21!165;CL:0002009!1.39e-17!65;CL:0000542!8.54e-17!53;CL:0000051!8.54e-17!53;CL:0002194!2.16e-16!63;CL:0000576!2.16e-16!63;CL:0000040!2.16e-16!63;CL:0000559!2.16e-16!63;CL:0000838!3.10e-16!52;CL:0000557!1.95e-15!71;CL:0000839!5.05e-13!70;CL:0000766!1.93e-12!76;CL:0000945!3.83e-11!24;CL:0000826!3.83e-11!24;CL:0000219!1.69e-09!390;CL:0000134!1.71e-09!358;CL:0002320!3.19e-08!365;CL:0000003!5.94e-08!722;CL:0000063!1.64e-07!578;CL:0000763!3.03e-07!112;CL:0000049!3.03e-07!112;CL:0000236!3.19e-07!14 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.17e-25;33!CL:0002057;1.17e-25;33!CL:0000576;3.12e-18;48!CL:0000473;1.99e-16;39!CL:0000234;1.99e-16;39!CL:0002087;1.43e-14;104!CL:0000945;2.74e-13;24!CL:0000542;4.25e-11;53!CL:0000738;2.11e-10;136!CL:0000766;6.41e-10;69!CL:0000236;5.41e-08;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,2.14e-44,136;CL:0002087,1.22e-42,115;CL:0002031,2.65e-37,120;CL:0000037,1.19e-31,168;CL:0000860,6.94e-31,42;CL:0002057,6.94e-31,42;CL:0000988,9.87e-31,177;CL:0002032,2.21e-28,161;CL:0000837,2.21e-28,161;CL:0000473,1.24e-24,48;CL:0000234,1.24e-24,48;CL:0002009,8.15e-23,61;CL:0002194,3.76e-21,59;CL:0000576,3.76e-21,59;CL:0000040,3.76e-21,59;CL:0000559,3.76e-21,59;CL:0000557,7.19e-20,67;CL:0000542,4.19e-19,53;CL:0000051,4.19e-19,53;CL:0000838,2.31e-18,52;CL:0000766,3.68e-17,72;CL:0000839,5.74e-17,66;CL:0000945,1.08e-13,24;CL:0000826,1.08e-13,24;CL:0000763,3.11e-11,108;CL:0000049,3.11e-11,108;CL:0000219,1.44e-10,386;CL:0000134,1.65e-10,354;CL:0002320,1.47e-09,361;CL:0000236,4.80e-09,14;CL:0000791,7.89e-07,18;CL:0000789,7.89e-07,18;CL:0002420,7.89e-07,18;CL:0002419,7.89e-07,18;CL:0000790,7.89e-07,18 | |||
|ontology_enrichment_development_v019=CL:0002057;1.80e-22;42!CL:0000051;4.25e-11;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!7.40e-15!102;UBERON:0003061!7.40e-15!102;UBERON:0002371!6.85e-12!80;UBERON:0002193!3.53e-11!112;UBERON:0001474!4.50e-10!86;UBERON:0004765!5.61e-09!101;UBERON:0001434!5.61e-09!101;UBERON:0002384!2.03e-08!375;UBERON:0002405!2.04e-08!115 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,9.02e-20,98;UBERON:0003061,9.02e-20,98;UBERON:0002193,1.54e-16,108;UBERON:0002371,6.21e-16,76;UBERON:0002405,2.25e-15,93;UBERON:0001474,1.97e-13,82;UBERON:0004765,1.68e-11,90;UBERON:0001434,1.96e-10,100;UBERON:0002384,6.49e-10,371;UBERON:0001557,8.02e-07,19 | |||
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| ||
|short_description=p3@MALT1 | |||
}} | }} |
Latest revision as of 00:36, 20 September 2015
Short description: | p3@MALT1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_MALT1_5end |
Coexpression cluster: | C1444_immature_migratory_CD14_amniotic_Eosinophils_CD19_Neutrophils |
Association with transcript: | -67bp_to_ENST00000345724_5end |
EntrezGene: | MALT1 |
HGNC: | 6819 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 9.02e-20 | 98 |
blood island | 9.02e-20 | 98 |
hemolymphoid system | 1.54e-16 | 108 |
bone marrow | 6.21e-16 | 76 |
immune system | 2.25e-15 | 93 |
bone element | 1.97e-13 | 82 |
skeletal element | 1.68e-11 | 90 |
skeletal system | 1.96e-10 | 100 |
connective tissue | 6.49e-10 | 371 |
upper respiratory tract | 8.02e-07 | 19 |