FFCP PHASE1:Hg19::chr7:92463153..92463169,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr7:92463153..92463169,- to FFCP PHASE1:Hg19::chr7:92463153..92463169,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=1021 | |EntrezGene=1021 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=1777 | |HGNC=1777 | ||
|TSSclassifier=strong | |||
|UniProt=Q00534 | |UniProt=Q00534 | ||
|association_with_transcript=-402bp_to_X66365_5end | |||
|cluster_id=chr7:92463153..92463169,- | |||
|coexpression_cluster_id=C2905 | |||
|description=CAGE_peak_8_at_CDK6_5end | |||
|id=chr7:92463153..92463169,- | |||
|ontology_enrichment_celltype=CL:0000763!1.55e-17!112;CL:0000049!1.55e-17!112;CL:0000037!1.70e-12!172;CL:0000566!1.70e-12!172;CL:0000557!4.04e-12!71;CL:0000988!1.11e-11!182;CL:0002032!2.18e-11!165;CL:0000837!2.18e-11!165;CL:0000766!1.08e-10!76;CL:0002009!7.57e-10!65;CL:0000839!7.80e-10!70;CL:0002194!4.27e-09!63;CL:0000576!4.27e-09!63;CL:0000040!4.27e-09!63;CL:0000559!4.27e-09!63;CL:0000860!9.88e-08!45;CL:0002057!1.33e-07!42;CL:0000738!5.10e-07!140 | |||
|ontology_enrichment_celltype_v019=CL:0002393;1.15e-09;6!CL:0002397;1.15e-09;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000763,4.17e-21,108;CL:0000049,4.17e-21,108;CL:0000037,3.52e-17,168;CL:0000988,2.18e-16,177;CL:0002032,1.01e-15,161;CL:0000837,1.01e-15,161;CL:0002393,1.63e-13,9;CL:0002397,1.63e-13,9;CL:0000557,1.33e-10,67;CL:0000766,3.49e-09,72;CL:0000839,1.09e-08,66;CL:0002009,4.05e-08,61;CL:0002194,1.41e-07,59;CL:0000576,1.41e-07,59;CL:0000040,1.41e-07,59;CL:0000559,1.41e-07,59;CL:0000738,7.13e-07,136 | |||
|ontology_enrichment_development_v019=CL:0000049;7.53e-08;108 | |||
|ontology_enrichment_disease=DOID:2531!1.04e-12!51;DOID:0060083!1.04e-12!51;DOID:1240!8.70e-11!39;DOID:162!2.47e-10!235;DOID:14566!3.03e-10!239;DOID:8692!9.95e-10!31;DOID:0050686!1.59e-08!137 | |||
|ontology_enrichment_disease_v019=DOID:8692;5.00e-19;31!DOID:1240;6.63e-18;39!DOID:2531;1.64e-13;51!DOID:0060083;1.64e-13;51 | |||
|ontology_enrichment_disease_v019_2=DOID:1240,3.89e-22,39;DOID:2531,1.66e-21,51;DOID:0060083,1.66e-21,51;DOID:8692,9.65e-20,31;DOID:0050686,1.00e-10,137;DOID:162,1.91e-08,235;DOID:14566,5.43e-08,239 | |||
|ontology_enrichment_uberon=UBERON:0002371!2.18e-10!80;UBERON:0001474!3.36e-10!86;UBERON:0002390!1.40e-09!102;UBERON:0003061!1.40e-09!102;UBERON:0004765!7.25e-08!101;UBERON:0001434!7.25e-08!101 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.15e-11,76;UBERON:0001474,8.38e-11,82;UBERON:0002390,4.77e-10,98;UBERON:0003061,4.77e-10,98;UBERON:0004765,7.01e-10,90;UBERON:0002405,2.12e-09,93;UBERON:0002193,2.40e-08,108;UBERON:0001434,4.11e-08,100 | |||
|phase1_expression=0,0.214100523890983,0.140954404095971,1.0007329835313,0,0,0,0,0,0,0,0.436882744260345,0,0.247532705920093,0,0,0,0,1.46379839637152,0.123121058076788,0,0.626909442956176,0.286235987131057,0.547497700291537,0.376627918784408,0.152826811495903,0.164201178899891,0.393553906568396,1.18009283054671,0.383829398097213,0.464448369948228,0,0,0,0.46480320348181,0.284338464974843,5.28480790802725,2.21598163412751,1.20326668482085,1.95309783644267,0,0,0.515151135268373,0.726991193897824,0.377875943688809,0.242584061187816,0.232429036905685,0.411167888021826,0.619412741790207,0.863077176966451,1.5369642391746,0.709446689665756,1.72372840368309,0,0,0.376484679085209,0,0,0.612167784741805,1.60464513538047,0.639337125799041,0.329851300186716,1.19678194572979,0.852449501065388,0.580418477257168,0.56738522469114,0.622822248995575,1.00499466102697,1.0429658368404,0.868755378820466,0,0.736555271975129,0.632924774881769,2.95757400836718,1.06302149982522,1.04829322754188,0.561643155732475,0,0.16072558669708,1.71007646244749,1.19350006319454,2.19196984517561,0,0,0,0.426730222566507,0,0,0,0,0,0,0,11.8954195721123,2.24203425192614,4.47752944117631,0,0,0,0,0,0,0,0,0,0.221533894583621,0,0.128091319725675,0,0.328875809207352,1.10540007114339,0,0,0,0,0.113309342697566,0.383220493601921,0,0.253019692019503,0,0,0,0,0,1.24930726552346,0,0.821127996921047,0.201606743224732,0.534880391567015,0,2.43806866313962,0,0.255725123687061,0.722878304769133,0.50133791063589,0.434539556882471,0,0,1.22895262313288,0.443458794925128,0.527008714158756,0.0654895377488563,0,0.370784442784429,1.62273696827342,0.522389211897802,1.59549552622638,0.476981248610684,0.571994910780128,0.74291500265913,0.39752481473341,0,0,0,0,0.275118041940067,0,0,0,0,0,0,0,0,0,0.0892997282840798,0.22452937262617,0.112611480483322,0,0,0,0,0,0,0.496971951695318,0.12663051166458,0.397227542439656,0,0.354668382198357,0,0,0,0.311211035399766,0.404132016209064,0,0,0.576175924479999,0.468642863667593,0,0,0.597794722207204,0.704606991862589,0.485618833104395,0,0.204154171254893,0.122834317311768,0.206651562351531,1.18800285728205,0.247266929278557,0,0,0,0,0,0.438977620880838,0,0.300476117813194,0.226864366320042,0.717558542755448,0.213557388818567,0.211931901159562,0.600182192168805,0.103052529238439,1.03056216018252,0.37223371266318,1.0126579934476,0.487185025805993,1.00973509697646,0.552299391853796,0.323292113637624,0.355009592516614,0.403008392910561,0.339121184620975,0.193260853163297,0,0,0.121973706129595,0,0,0.518305275076852,0.252320850875628,0,1.56449532329816,0,0,0.464367928031979,0,0.118306800039844,0.168584690078102,0.482022059766964,0.55146986366197,0.217879444092406,0.237270619111097,0.808987848960987,0.392442930250692,0,0,0,0.4115740113314,0,0,0,0,15.0097453800981,0.737930631258681,0.171567810298526,1.09750285408626,0,0.100528972411631,0.185176890317059,0,0,0,0.231860809950154,0.352226082707465,0,0,0,0,0,1.23108503043699,0.468008530278475,0.445893486866185,0,1.00789276919316,0.283550194484773,0.0895585227028483,0,0,0.985326475791887,1.84901711427775,1.24396869324463,1.29707958075265,0.50496973370552,0,0,0,0,0.102827492703324,0,0,0.336393253036082,0,0.4400297149257,1.16344544182,0,0,0.26593811658487,0,0,0,0,0.285955987316295,0,0,0.325736184293735,0,0.791951872933429,0.602878754119172,0.871533458600294,0.699810938274399,0,0.502257091432126,0,0.479249710983165,0,0,0.579125226670317,0.205476322550383,0.179060963239896,0.336255431980582,0.788123040807709,0,0.128343036279748,2.54094624222463,3.90419561572865,0.773288812777695,0.167516265334349,0,0,2.99161459204025,0.828831026872071,0,0,0,0.207970861530807,0.356857977594324,0,0,0.300946099727719,0,0,0,0.184369168541703,0.0868836144680828,0,0,0,1.07857100409308,0.106727557803444,1.21251028578504,1.66435439510497,0.907170879989041,0.248107807818777,0,0,0.640695746278505,0.511707249066704,0.482561763430822,2.96836132889982,0,0.355123450626254,0.0821271560138091,0.519254429183621,0.116210378459959,0.483437798366489,0.200506470303285,0.0920809889358963,0.34444334449382,0.182091168006717,0.524497659837696,0.451199612907412,0.462092022626489,1.56869953835371,0,0.949964660035881,0,0,1.0795795805107,0,0.541892875087706,0,0,0,0,0,0,0.256450125116389,0,0.325378394664303,0.206082023295445,0,0.082509499920588,1.14853107599234,0,1.6068392984416,0.386682873168488,0.154048617114644,0.15350367472613,0.275673144969061,0.429680979473094,0,0.426133137080504,0.356128142586949,0,0,0.638063562472921,0,0,0.31481234683064,0.6970372701606,0,0,0,0,0.715624433709956,0.744316738719335,0.316379424718726,0.38126038784765,0,0.42793898803392,0,0,0.359744915166629,0,0.235624804691373,0,0,0,0,0.243713489631284,0,0.136499911407986,0.282810863907425,0,0,0,0.438450885253763,0,0.655894752046633,0,0.30982349809975,0,0.143411352204052,0.294747123039363,0.35667105148125,0,0.211107635297664,0,0,0,0,0,0,0.376575203107117,0,0,0,0.229723400206959,0,0.764637207142375,0.569647187174163,0,0,0,0.540031437238115,0,0.106824071127473,0,0.245040215981032,0,3.75099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|phase1_expression=0,0.214100523890983,0.140954404095971,1.0007329835313,0,0,0,0,0,0,0,0.436882744260345,0,0.247532705920093,0,0,0,0,1.46379839637152,0.123121058076788,0,0.626909442956176,0.286235987131057,0.547497700291537,0.376627918784408,0.152826811495903,0.164201178899891,0.393553906568396,1.18009283054671,0.383829398097213,0.464448369948228,0,0,0,0.46480320348181,0.284338464974843,5.28480790802725,2.21598163412751,1.20326668482085,1.95309783644267,0,0,0.515151135268373,0.726991193897824,0.377875943688809,0.242584061187816,0.232429036905685,0.411167888021826,0.619412741790207,0.863077176966451,1.5369642391746,0.709446689665756,1.72372840368309,0,0,0.376484679085209,0,0,0.612167784741805,1.60464513538047,0.639337125799041,0.329851300186716,1.19678194572979,0.852449501065388,0.580418477257168,0.56738522469114,0.622822248995575,1.00499466102697,1.0429658368404,0.868755378820466,0,0.736555271975129,0.632924774881769,2.95757400836718,1.06302149982522,1.04829322754188,0.561643155732475,0,0.16072558669708,1.71007646244749,1.19350006319454,2.19196984517561,0,0,0,0.426730222566507,0,0,0,0,0,0,0,11.8954195721123,2.24203425192614,4.47752944117631,0,0,0,0,0,0,0,0,0,0.221533894583621,0,0.128091319725675,0,0.328875809207352,1.10540007114339,0,0,0,0,0.113309342697566,0.383220493601921,0,0.253019692019503,0,0,0,0,0,1.24930726552346,0,0.821127996921047,0.201606743224732,0.534880391567015,0,2.43806866313962,0,0.255725123687061,0.722878304769133,0.50133791063589,0.434539556882471,0,0,1.22895262313288,0.443458794925128,0.527008714158756,0.0654895377488563,0,0.370784442784429,1.62273696827342,0.522389211897802,1.59549552622638,0.476981248610684,0.571994910780128,0.74291500265913,0.39752481473341,0,0,0,0,0.275118041940067,0,0,0,0,0,0,0,0,0,0.0892997282840798,0.22452937262617,0.112611480483322,0,0,0,0,0,0,0.496971951695318,0.12663051166458,0.397227542439656,0,0.354668382198357,0,0,0,0.311211035399766,0.404132016209064,0,0,0.576175924479999,0.468642863667593,0,0,0.597794722207204,0.704606991862589,0.485618833104395,0,0.204154171254893,0.122834317311768,0.206651562351531,1.18800285728205,0.247266929278557,0,0,0,0,0,0.438977620880838,0,0.300476117813194,0.226864366320042,0.717558542755448,0.213557388818567,0.211931901159562,0.600182192168805,0.103052529238439,1.03056216018252,0.37223371266318,1.0126579934476,0.487185025805993,1.00973509697646,0.552299391853796,0.323292113637624,0.355009592516614,0.403008392910561,0.339121184620975,0.193260853163297,0,0,0.121973706129595,0,0,0.518305275076852,0.252320850875628,0,1.56449532329816,0,0,0.464367928031979,0,0.118306800039844,0.168584690078102,0.482022059766964,0.55146986366197,0.217879444092406,0.237270619111097,0.808987848960987,0.392442930250692,0,0,0,0.4115740113314,0,0,0,0,15.0097453800981,0.737930631258681,0.171567810298526,1.09750285408626,0,0.100528972411631,0.185176890317059,0,0,0,0.231860809950154,0.352226082707465,0,0,0,0,0,1.23108503043699,0.468008530278475,0.445893486866185,0,1.00789276919316,0.283550194484773,0.0895585227028483,0,0,0.985326475791887,1.84901711427775,1.24396869324463,1.29707958075265,0.50496973370552,0,0,0,0,0.102827492703324,0,0,0.336393253036082,0,0.4400297149257,1.16344544182,0,0,0.26593811658487,0,0,0,0,0.285955987316295,0,0,0.325736184293735,0,0.791951872933429,0.602878754119172,0.871533458600294,0.699810938274399,0,0.502257091432126,0,0.479249710983165,0,0,0.579125226670317,0.205476322550383,0.179060963239896,0.336255431980582,0.788123040807709,0,0.128343036279748,2.54094624222463,3.90419561572865,0.773288812777695,0.167516265334349,0,0,2.99161459204025,0.828831026872071,0,0,0,0.207970861530807,0.356857977594324,0,0,0.300946099727719,0,0,0,0.184369168541703,0.0868836144680828,0,0,0,1.07857100409308,0.106727557803444,1.21251028578504,1.66435439510497,0.907170879989041,0.248107807818777,0,0,0.640695746278505,0.511707249066704,0.482561763430822,2.96836132889982,0,0.355123450626254,0.0821271560138091,0.519254429183621,0.116210378459959,0.483437798366489,0.200506470303285,0.0920809889358963,0.34444334449382,0.182091168006717,0.524497659837696,0.451199612907412,0.462092022626489,1.56869953835371,0,0.949964660035881,0,0,1.0795795805107,0,0.541892875087706,0,0,0,0,0,0,0.256450125116389,0,0.325378394664303,0.206082023295445,0,0.082509499920588,1.14853107599234,0,1.6068392984416,0.386682873168488,0.154048617114644,0.15350367472613,0.275673144969061,0.429680979473094,0,0.426133137080504,0.356128142586949,0,0,0.638063562472921,0,0,0.31481234683064,0.6970372701606,0,0,0,0,0.715624433709956,0.744316738719335,0.316379424718726,0.38126038784765,0,0.42793898803392,0,0,0.359744915166629,0,0.235624804691373,0,0,0,0,0.243713489631284,0,0.136499911407986,0.282810863907425,0,0,0,0.438450885253763,0,0.655894752046633,0,0.30982349809975,0,0.143411352204052,0.294747123039363,0.35667105148125,0,0.211107635297664,0,0,0,0,0,0,0.376575203107117,0,0,0,0.229723400206959,0,0.764637207142375,0.569647187174163,0,0,0,0.540031437238115,0,0.106824071127473,0,0.245040215981032,0,3.75099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| ||
|short_description=p8@CDK6 | |||
}} | }} |
Latest revision as of 00:39, 20 September 2015
Short description: | p8@CDK6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_CDK6_5end |
Coexpression cluster: | C2905_granulocyte_lymphoma_acute_Hodgkin_CD34_CD133_neuroblastoma |
Association with transcript: | -402bp_to_X66365_5end |
EntrezGene: | CDK6 |
HGNC: | 1777 |
UniProt: | Q00534 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid cell | 4.17e-21 | 108 |
common myeloid progenitor | 4.17e-21 | 108 |
hematopoietic stem cell | 3.52e-17 | 168 |
hematopoietic cell | 2.18e-16 | 177 |
hematopoietic oligopotent progenitor cell | 1.01e-15 | 161 |
hematopoietic multipotent progenitor cell | 1.01e-15 | 161 |
intermediate monocyte | 1.63e-13 | 9 |
CD14-positive, CD16-positive monocyte | 1.63e-13 | 9 |
granulocyte monocyte progenitor cell | 1.33e-10 | 67 |
myeloid leukocyte | 3.49e-09 | 72 |
myeloid lineage restricted progenitor cell | 1.09e-08 | 66 |
macrophage dendritic cell progenitor | 4.05e-08 | 61 |
monopoietic cell | 1.41e-07 | 59 |
monocyte | 1.41e-07 | 59 |
monoblast | 1.41e-07 | 59 |
promonocyte | 1.41e-07 | 59 |
leukocyte | 7.13e-07 | 136 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 3.15e-11 | 76 |
bone element | 8.38e-11 | 82 |
hematopoietic system | 4.77e-10 | 98 |
blood island | 4.77e-10 | 98 |
skeletal element | 7.01e-10 | 90 |
immune system | 2.12e-09 | 93 |
hemolymphoid system | 2.40e-08 | 108 |
skeletal system | 4.11e-08 | 100 |
Ontology term | p-value | n |
---|---|---|
leukemia | 3.89e-22 | 39 |
hematologic cancer | 1.66e-21 | 51 |
immune system cancer | 1.66e-21 | 51 |
myeloid leukemia | 9.65e-20 | 31 |
organ system cancer | 1.00e-10 | 137 |
cancer | 1.91e-08 | 235 |
disease of cellular proliferation | 5.43e-08 | 239 |