FFCP PHASE1:Hg19::chr7:92777598..92777603,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=219285 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1349 | |||
|TSSclassifier=strong | |||
|UniProt=Q8IVG5 | |||
|association_with_transcript=54bp_to_ENST00000414791,ENST00000437805,ENST00000439952,ENST00000446033,ENST00000446959_5end | |||
|cluster_id=chr7:92777598..92777603,- | |||
|coexpression_cluster_id=C17 | |||
|description=CAGE_peak_13_at_SAMD9L_5end | |||
|id=chr7:92777598..92777603,- | |||
|ontology_enrichment_celltype=CL:0000839!2.34e-26!70;CL:0002057!2.66e-26!42;CL:0000557!5.28e-26!71;CL:0000860!2.51e-24!45;CL:0002009!6.15e-23!65;CL:0000766!1.84e-21!76;CL:0002194!5.10e-21!63;CL:0000576!5.10e-21!63;CL:0000040!5.10e-21!63;CL:0000559!5.10e-21!63;CL:0000763!1.93e-20!112;CL:0000049!1.93e-20!112;CL:0002031!3.24e-16!124;CL:0000738!8.31e-14!140;CL:0002032!1.38e-13!165;CL:0000837!1.38e-13!165;CL:0000037!7.95e-13!172;CL:0000566!7.95e-13!172;CL:0000988!7.70e-12!182;CL:0002087!9.45e-11!119;CL:0000134!4.73e-08!358;CL:0002320!8.93e-08!365;CL:0000219!8.42e-07!390 | |||
|ontology_enrichment_celltype_v019=CL:0000860;4.98e-26;33!CL:0002057;4.98e-26;33!CL:0000473;1.35e-18;39!CL:0000234;1.35e-18;39!CL:0000576;1.13e-15;48!CL:0000766;3.79e-10;69!CL:0000097;4.79e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,2.25e-24,42;CL:0002057,2.25e-24,42;CL:0000473,2.24e-21,48;CL:0000234,2.24e-21,48;CL:0000839,7.23e-21,66;CL:0000557,1.45e-20,67;CL:0000766,3.53e-19,72;CL:0002194,3.59e-17,59;CL:0000576,3.59e-17,59;CL:0000040,3.59e-17,59;CL:0000559,3.59e-17,59;CL:0002009,1.25e-16,61;CL:0000763,6.23e-13,108;CL:0000049,6.23e-13,108;CL:0002031,1.14e-11,120;CL:0000738,2.51e-10,136;CL:0002087,5.38e-09,115;CL:0002032,9.40e-09,161;CL:0000837,9.40e-09,161;CL:0000037,2.15e-08,168;CL:0000988,5.65e-08,177;CL:0000097,4.79e-07,5;CL:0002028,4.79e-07,5 | |||
|ontology_enrichment_development_v019=CL:0002057;1.33e-18;42!CL:0000049;4.72e-08;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.30e-22!80;UBERON:0001474!9.66e-21!86;UBERON:0004765!6.22e-19!101;UBERON:0001434!6.22e-19!101;UBERON:0002390!1.12e-18!102;UBERON:0003061!1.12e-18!102;UBERON:0002193!1.87e-18!112;UBERON:0002405!7.53e-18!115;UBERON:0002204!1.12e-09!167;UBERON:0003081!3.52e-08!216;UBERON:0002384!2.13e-07!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.37e-18,76;UBERON:0001474,6.63e-17,82;UBERON:0004765,1.92e-15,90;UBERON:0002405,5.86e-15,93;UBERON:0002390,3.24e-14,98;UBERON:0003061,3.24e-14,98;UBERON:0001434,6.14e-14,100;UBERON:0002193,6.23e-13,108;UBERON:0002204,1.92e-08,167;UBERON:0003081,5.76e-07,203 | |||
|phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257575567634187,0,0,0,0,0,0,0.863077176966451,0.256160706529101,1.41889337933151,0.689491361473237,0,0,0.188242339542605,0.272906150057846,0,0.612167784741805,0,0,1.64925650093358,2.99195486432448,1.70489900213078,0,0,0,0.502497330513487,1.0429658368404,0.434377689410233,0,0.368277635987565,1.89877432464531,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26591592103773,0,0,0,0,0,0,0,0,0,0,0.258416759169329,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161872944368132,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150238058906597,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,20.1991927537337,0.176096868026452,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114814448164607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219259876645935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280797178113459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0870592065804026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.449947783103001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159296767163702,0,0,0,0,0,0,0,0.406870733204662,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176689145945881,0,0,0,0,0,0,0,0,0.163565394255844,0.327609848846413,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0.115233987555779,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0645889098360061,0,0,0,0,0,0,0,0,0,0,0.106727345877715,0,0,0,0,0,0,0,0 | |||
|short_description=p13@SAMD9L | |||
}} |
Latest revision as of 01:03, 20 September 2015
Short description: | p13@SAMD9L |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_13_at_SAMD9L_5end |
Coexpression cluster: | C17_Mast_CD14_Monocytederived_Lymphatic_Smooth_mesenchymal_Macrophage |
Association with transcript: | 54bp_to_ENST00000414791, ENST00000437805, ENST00000439952, ENST00000446033, ENST00000446959_5end |
EntrezGene: | SAMD9L |
HGNC: | 1349 |
UniProt: | Q8IVG5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 2.25e-24 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.25e-24 | 42 |
defensive cell | 2.24e-21 | 48 |
phagocyte | 2.24e-21 | 48 |
myeloid lineage restricted progenitor cell | 7.23e-21 | 66 |
granulocyte monocyte progenitor cell | 1.45e-20 | 67 |
myeloid leukocyte | 3.53e-19 | 72 |
monopoietic cell | 3.59e-17 | 59 |
monocyte | 3.59e-17 | 59 |
monoblast | 3.59e-17 | 59 |
promonocyte | 3.59e-17 | 59 |
macrophage dendritic cell progenitor | 1.25e-16 | 61 |
myeloid cell | 6.23e-13 | 108 |
common myeloid progenitor | 6.23e-13 | 108 |
hematopoietic lineage restricted progenitor cell | 1.14e-11 | 120 |
leukocyte | 2.51e-10 | 136 |
nongranular leukocyte | 5.38e-09 | 115 |
hematopoietic oligopotent progenitor cell | 9.40e-09 | 161 |
hematopoietic multipotent progenitor cell | 9.40e-09 | 161 |
hematopoietic stem cell | 2.15e-08 | 168 |
hematopoietic cell | 5.65e-08 | 177 |
mast cell | 4.79e-07 | 5 |
basophil mast progenitor cell | 4.79e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 3.37e-18 | 76 |
bone element | 6.63e-17 | 82 |
skeletal element | 1.92e-15 | 90 |
immune system | 5.86e-15 | 93 |
hematopoietic system | 3.24e-14 | 98 |
blood island | 3.24e-14 | 98 |
skeletal system | 6.14e-14 | 100 |
hemolymphoid system | 6.23e-13 | 108 |
musculoskeletal system | 1.92e-08 | 167 |
lateral plate mesoderm | 5.76e-07 | 203 |