FFCP PHASE1:Hg19::chrX:153210107..153210140,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5973 | |EntrezGene=5973 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9959 | |HGNC=9959 | ||
|TSSclassifier=strong | |||
|UniProt=A6NKZ2 | |UniProt=A6NKZ2 | ||
|association_with_transcript=0bp_to_ENST00000369997_5end | |association_with_transcript=0bp_to_ENST00000369997_5end | ||
|cluster_id=chrX:153210107..153210140,- | |||
|coexpression_cluster_id=C4860 | |||
|description=CAGE_peak_2_at_RENBP_5end | |description=CAGE_peak_2_at_RENBP_5end | ||
|id=chrX:153210107..153210140,- | |id=chrX:153210107..153210140,- | ||
|ontology_enrichment_celltype=CL:0000766!6.62e-28!76;CL:0000763!7.26e-26!112;CL:0000049!7.26e-26!112;CL:0000839!2.96e-25!70;CL:0000557!1.41e-24!71;CL:0002194!3.61e-22!63;CL:0000576!3.61e-22!63;CL:0000040!3.61e-22!63;CL:0000559!3.61e-22!63;CL:0000037!8.23e-22!172;CL:0000566!8.23e-22!172;CL:0002009!5.49e-21!65;CL:0000738!1.01e-20!140;CL:0000988!1.02e-20!182;CL:0002032!1.37e-20!165;CL:0000837!1.37e-20!165;CL:0002057!4.61e-20!42;CL:0000860!8.06e-17!45;CL:0002031!1.29e-16!124;CL:0002087!1.64e-15!119 | |ontology_enrichment_celltype=CL:0000766!6.62e-28!76;CL:0000763!7.26e-26!112;CL:0000049!7.26e-26!112;CL:0000839!2.96e-25!70;CL:0000557!1.41e-24!71;CL:0002194!3.61e-22!63;CL:0000576!3.61e-22!63;CL:0000040!3.61e-22!63;CL:0000559!3.61e-22!63;CL:0000037!8.23e-22!172;CL:0000566!8.23e-22!172;CL:0002009!5.49e-21!65;CL:0000738!1.01e-20!140;CL:0000988!1.02e-20!182;CL:0002032!1.37e-20!165;CL:0000837!1.37e-20!165;CL:0002057!4.61e-20!42;CL:0000860!8.06e-17!45;CL:0002031!1.29e-16!124;CL:0002087!1.64e-15!119 | ||
|ontology_enrichment_celltype_v019=CL:0000473;3.88e-18;39!CL:0000234;3.88e-18;39!CL:0000576;2.23e-17;48!CL:0000860;4.11e-17;33!CL:0002057;4.11e-17;33!CL:0000766;1.65e-16;69!CL:0000763;1.07e-10;100!CL:0000148;1.40e-07;10!CL:0000147;4.63e-07;14!CL:0000738;8.52e-07;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,2.87e-38,72;CL:0000839,1.03e-35,66;CL:0000763,6.91e-35,108;CL:0000049,6.91e-35,108;CL:0000557,1.74e-34,67;CL:0002194,5.78e-32,59;CL:0000576,5.78e-32,59;CL:0000040,5.78e-32,59;CL:0000559,5.78e-32,59;CL:0002009,5.58e-30,61;CL:0000473,1.16e-28,48;CL:0000234,1.16e-28,48;CL:0000037,2.33e-27,168;CL:0002032,3.78e-26,161;CL:0000837,3.78e-26,161;CL:0000988,4.09e-26,177;CL:0000738,1.04e-25,136;CL:0000860,7.43e-24,42;CL:0002057,7.43e-24,42;CL:0002031,2.24e-21,120;CL:0002087,3.53e-20,115;CL:0000148,1.46e-07,10;CL:0000541,1.46e-07,10;CL:0000147,4.06e-07,14 | |||
|ontology_enrichment_development_v019=CL:0002057;2.88e-17;42!CL:0000049;3.10e-10;108 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!8.43e-28!112;UBERON:0002390!3.21e-25!102;UBERON:0003061!3.21e-25!102;UBERON:0002371!1.91e-21!80;UBERON:0002405!1.95e-20!115;UBERON:0001474!8.20e-18!86;UBERON:0007023!2.02e-16!115;UBERON:0004765!2.49e-13!101;UBERON:0001434!2.49e-13!101;UBERON:0003081!1.79e-07!216;UBERON:0001049!6.25e-07!57;UBERON:0005068!6.25e-07!57;UBERON:0006241!6.25e-07!57;UBERON:0007135!6.25e-07!57 | |ontology_enrichment_uberon=UBERON:0002193!8.43e-28!112;UBERON:0002390!3.21e-25!102;UBERON:0003061!3.21e-25!102;UBERON:0002371!1.91e-21!80;UBERON:0002405!1.95e-20!115;UBERON:0001474!8.20e-18!86;UBERON:0007023!2.02e-16!115;UBERON:0004765!2.49e-13!101;UBERON:0001434!2.49e-13!101;UBERON:0003081!1.79e-07!216;UBERON:0001049!6.25e-07!57;UBERON:0005068!6.25e-07!57;UBERON:0006241!6.25e-07!57;UBERON:0007135!6.25e-07!57 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,2.91e-37,108;UBERON:0002390,6.64e-34,98;UBERON:0003061,6.64e-34,98;UBERON:0002405,6.68e-33,93;UBERON:0002371,7.34e-29,76;UBERON:0001474,1.72e-24,82;UBERON:0004765,1.05e-19,90;UBERON:0001434,1.98e-16,100;UBERON:0007023,7.21e-14,114;UBERON:0003081,4.63e-10,203 | |||
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|phase1_expression=2.18014055124668,1.49870366723688,0.563817616383885,2.00146596706261,2.68176656656373,1.74467704820074,0,0.631719873426831,0,0.245733936501509,1.39560233594486,0.218441372130172,0.263766978228454,0.247532705920093,0.662794751455832,0,0,0,0,0.123121058076788,0,0.940364164434263,0.286235987131057,0.136874425072884,0.502170558379211,0.0764134057479513,0.0821005894499457,0.157421562627358,6.68719270643137,0.767658796194425,3.56077083626975,0,0,0.369754010166788,0,0,2.34880351467878,3.87796785972314,1.60435557976113,3.03815219002193,17.9132379391939,12.6318529747402,14.6818073551486,8.86929256555345,6.42389104270976,8.24785808038575,6.50801303335917,10.2791972005456,6.19412741790207,6.90461741573161,6.91633907628572,6.62150243688039,6.89491361473237,7.10033151942209,0,6.77672422353377,8.18718450173537,8.7642158933583,5.50951006267625,7.70229664982625,4.47535988059329,7.91643120448119,5.78444607102732,7.2458207590558,4.93355705668593,5.10646702222026,3.73693349397345,3.76872997885115,5.73631210262222,7.16723187526885,4.84319602106695,4.05105399586321,2.53169909952708,8.45021145247767,11.9058407980424,11.1119082119439,7.07670376222919,6.60778328502628,5.14321877430656,10.8304842621674,13.327417372339,12.2384983022305,0,6.55366333514558,4.44754626931777,2.98711155796555,2.40237592221607,1.72425731986345,1.98313461835459,2.86216126360609,0.569212969109448,0,0.764546456250458,1.32171328579026,1.68152568894461,1.05353633910031,0.786839080455332,1.57204305099666,1.43921049299656,7.52339229258051,2.60737813306872,5.20792586308207,3.89653456815823,5.9047542149142,2.65145316727353,3.1014745241707,3.5204502289452,9.60684897942564,7.1532641157933,4.43982342429925,4.14525026678773,7.24507714337631,3.70716407905151,4.28065324943541,3.1360657141493,3.62589896632212,1.14966148080576,2.06176467289578,1.26509846009751,2.86708872891687,0.651083453856419,1.90090408889675,1.95747654801105,1.91979916731628,8.74515085866421,3.07810427657222,3.28451198768419,0.201606743224732,0,1.30341963494519,0,0.670700859703636,0,0,0,0.579386075843295,0,0,0.850813354476611,0.443458794925128,0.614843499851882,4.38779902917337,0,0,14.9291801081154,13.059730297445,11.833258486179,1.90792499444274,2.28797964312051,2.60020250930695,1.19257444420023,0.860234595106124,0.694281003215189,0,0.419499436209906,0.275118041940067,0,6.20200222006389,8.53839030448104,3.68192674041137,1.20848795132744,3.04108842287405,1.22031028774085,1.10298924103761,0.81014194788176,0.892997282840798,2.2452937262617,1.80178368773316,1.53316637465883,1.89853131913626,0.366403487860815,2.63560834872127,3.87780264148325,0,0,0.12663051166458,2.91300197789081,0,0.354668382198357,0,0,1.2333377420858,0,0.808264032418128,0,0.151357427644931,0,0.234321431833797,1.5608003841516,0.570471821544449,1.94283284717341,0.23486899728753,0,0.140450806702248,0.204154171254893,0.122834317311768,1.23990937410919,1.18800285728205,1.7308685049499,0,1.43723628363248,0.505008341862199,0,0.277064115484183,0,0.30648779579902,2.40380894250555,0.567160915800105,0.717558542755448,0.213557388818567,0.211931901159562,0.900273288253207,0.103052529238439,1.03056216018252,0,1.35021065793013,0.194874010322397,0.504867548488229,0.184099797284599,0.323292113637624,0.710019185033229,0.10075209822764,0.169560592310488,0,0,0,6.34263271873896,3.5783037446801,5.57730925773688,9.53681706141408,6.30802127189071,2.55484151353081,0,0,1.38134921352481,0,0.721879481669586,0,0,0,0,0,0,0,0,0,10.3341763647451,2.80483547606892,0,0,1.26755034821831,0,4.13552934676983,0.441463099414651,0.368965315629341,0.343135620597051,0,0,0,0.0925884451585296,0.977424915930974,0,0,2.78232971940184,0.352226082707465,4.90845922387651,8.33373922637899,5.51737041480335,0,0.858486162094873,19.9435774930792,9.36017060556951,15.4576408780277,0,0,0,0,0,0,6.40462209264727,17.6096868026452,26.7453269047596,34.3005489132368,31.9393356568741,5.3338231205422,11.8416411923066,15.2382681373061,3.4214489204541,5.96399457679276,7.50857644609794,6.5740079505033,0.112131084345361,0,0.22001485746285,0.387815147273333,3.57656445851882,0.845302752556,1.32969058292435,1.04007436911366,0.257207374262142,0,0.532844358032199,0.428933980974443,0,0,0,0,0,0,0,0.099972991182057,24.3247561282381,13.5609414686674,14.7583757638122,1.4377491329495,0,0,1.88215698667853,0.61642896765115,0.537182889719687,1.00876629594175,0.788123040807709,1.07813787429759,0.898401253958239,2.54094624222463,0,0.773288812777695,1.50764638800914,0.637938751653163,8.98808428736619,2.99161459204025,4.55857064779639,0,0.500170521059677,0.271265023699736,0,0.178428988797162,0,0,0.300946099727719,4.5481500811197,3.10419213877515,0,0.184369168541703,0.260650843404249,8.61525092836058,1.37257369524342,3.3082884179662,2.5885704098234,2.24127871387233,0,0,0.604780586659361,0.496215615637554,1.07423381301644,1.96462066103151,1.28139149255701,4.60536524160033,0.321707842287215,4.45254199334973,0,0.177561725313127,0.246381468041427,0,0.116210378459959,0.241718899183244,0,0.184161977871793,0.114814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| ||
|short_description=p2@RENBP | |short_description=p2@RENBP | ||
}} | }} |
Latest revision as of 01:25, 20 September 2015
Short description: | p2@RENBP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_RENBP_5end |
Coexpression cluster: | C4860_Mast_Macrophage_Monocytederived_CD14_Melanocyte_testicular_Dendritic |
Association with transcript: | 0bp_to_ENST00000369997_5end |
EntrezGene: | RENBP |
HGNC: | 9959 |
UniProt: | A6NKZ2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 2.87e-38 | 72 |
myeloid lineage restricted progenitor cell | 1.03e-35 | 66 |
myeloid cell | 6.91e-35 | 108 |
common myeloid progenitor | 6.91e-35 | 108 |
granulocyte monocyte progenitor cell | 1.74e-34 | 67 |
monopoietic cell | 5.78e-32 | 59 |
monocyte | 5.78e-32 | 59 |
monoblast | 5.78e-32 | 59 |
promonocyte | 5.78e-32 | 59 |
macrophage dendritic cell progenitor | 5.58e-30 | 61 |
defensive cell | 1.16e-28 | 48 |
phagocyte | 1.16e-28 | 48 |
hematopoietic stem cell | 2.33e-27 | 168 |
hematopoietic oligopotent progenitor cell | 3.78e-26 | 161 |
hematopoietic multipotent progenitor cell | 3.78e-26 | 161 |
hematopoietic cell | 4.09e-26 | 177 |
leukocyte | 1.04e-25 | 136 |
classical monocyte | 7.43e-24 | 42 |
CD14-positive, CD16-negative classical monocyte | 7.43e-24 | 42 |
hematopoietic lineage restricted progenitor cell | 2.24e-21 | 120 |
nongranular leukocyte | 3.53e-20 | 115 |
melanocyte | 1.46e-07 | 10 |
melanoblast | 1.46e-07 | 10 |
pigment cell | 4.06e-07 | 14 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 2.91e-37 | 108 |
hematopoietic system | 6.64e-34 | 98 |
blood island | 6.64e-34 | 98 |
immune system | 6.68e-33 | 93 |
bone marrow | 7.34e-29 | 76 |
bone element | 1.72e-24 | 82 |
skeletal element | 1.05e-19 | 90 |
skeletal system | 1.98e-16 | 100 |
adult organism | 7.21e-14 | 114 |
lateral plate mesoderm | 4.63e-10 | 203 |