FFCP PHASE1:Hg19::chr11:72492742..72492753,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr11:72492742..72492753,- to FFCP PHASE1:Hg19::chr11:72492742..72492753,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=10809 | |EntrezGene=10809 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10666 | |HGNC=10666 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=25bp_to_ENST00000535267_5end | |||
|cluster_id=chr11:72492742..72492753,- | |||
|coexpression_cluster_id=C2162 | |||
|description=CAGE_peak_8_at_STARD10_5end | |||
|id=chr11:72492742..72492753,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000182;3.34e-15;12!CL:0002563;1.18e-08;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,2.63e-15,12;CL:0000223,2.81e-11,58;CL:0002563,1.22e-08,4;CL:0000066,4.31e-07,253 | |||
|ontology_enrichment_development_v019=UBERON:0004161;1.62e-16;11!UBERON:0009497;5.88e-14;13!CL:0000223;8.39e-09;58!UBERON:0006242;1.65e-08;1!UBERON:0003104;6.77e-08;31 | |||
|ontology_enrichment_disease=DOID:5093!1.52e-07!4;DOID:1612!1.52e-07!4;DOID:305!4.11e-07!106;DOID:7!5.98e-07!39 | |||
|ontology_enrichment_disease_v019=DOID:5093;5.15e-18;4!DOID:1612;5.15e-18;4!DOID:299;1.32e-10;25!DOID:3119;1.06e-08;14 | |||
|ontology_enrichment_disease_v019_2=DOID:5093,5.01e-18,4;DOID:1612,5.01e-18,4;DOID:299,1.33e-10,25;DOID:305,1.61e-09,106;DOID:3119,1.12e-08,14 | |||
|ontology_enrichment_uberon=UBERON:0007023!5.22e-15!115;UBERON:0004119!3.51e-11!169;UBERON:0000925!3.51e-11!169;UBERON:0006595!3.51e-11!169;UBERON:0001049!2.85e-10!57;UBERON:0005068!2.85e-10!57;UBERON:0006241!2.85e-10!57;UBERON:0007135!2.85e-10!57;UBERON:0000481!3.07e-10!347;UBERON:0001893!3.19e-10!34;UBERON:0002020!3.32e-10!34;UBERON:0003528!3.32e-10!34;UBERON:0001007!4.81e-10!155;UBERON:0001555!4.81e-10!155;UBERON:0007026!4.81e-10!155;UBERON:0002780!6.91e-10!41;UBERON:0001890!6.91e-10!41;UBERON:0006240!6.91e-10!41;UBERON:0002616!1.11e-09!59;UBERON:0003929!1.15e-09!54;UBERON:0003080!1.62e-09!42;UBERON:0002791!1.94e-09!33;UBERON:0001869!8.86e-09!32;UBERON:0005743!1.73e-08!86;UBERON:0009497!1.80e-08!25;UBERON:0000015!1.80e-08!25;UBERON:0002423!1.80e-08!25;UBERON:0006235!1.80e-08!25;UBERON:0004161!1.80e-08!25;UBERON:0000062!2.07e-08!511;UBERON:0000955!2.09e-08!69;UBERON:0006238!2.09e-08!69;UBERON:0003056!2.22e-08!61;UBERON:0004921!4.56e-08!129;UBERON:0004185!4.56e-08!129;UBERON:0003075!4.56e-08!86;UBERON:0007284!4.56e-08!86;UBERON:0005911!5.01e-08!82;UBERON:0000033!5.79e-08!123;UBERON:0001017!6.36e-08!82;UBERON:0000153!1.16e-07!129;UBERON:0007811!1.16e-07!129;UBERON:0000475!2.25e-07!365;UBERON:0002346!2.37e-07!90;UBERON:0002619!6.05e-07!22;UBERON:0000073!6.37e-07!94;UBERON:0001016!6.37e-07!94;UBERON:0000064!8.39e-07!219;UBERON:0002308!9.99e-07!9;UBERON:0000125!9.99e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0002423;1.35e-13;25!UBERON:0002107;1.70e-13;19!UBERON:0006925;1.70e-13;19!UBERON:0005409;2.14e-11;22!UBERON:0000485;2.98e-10;7!UBERON:0001242;1.18e-08;4!UBERON:0001262;1.18e-08;4!UBERON:0004786;1.18e-08;4!UBERON:0004808;1.18e-08;4!UBERON:0001277;1.18e-08;4!UBERON:0002365;6.90e-08;31!UBERON:0002330;6.90e-08;31!UBERON:0000310;1.68e-07;10!UBERON:0004921;3.19e-07;33!UBERON:0000945;5.01e-07;5!UBERON:0010039;5.01e-07;5!UBERON:0000160;6.70e-07;17!UBERON:0001443;7.43e-07;11!UBERON:0002368;9.69e-07;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0009497,1.19e-13,25;UBERON:0000015,1.19e-13,25;UBERON:0002423,1.19e-13,25;UBERON:0006235,1.19e-13,25;UBERON:0004161,1.19e-13,25;UBERON:0002107,1.40e-13,19;UBERON:0006925,1.40e-13,19;UBERON:0008836,1.40e-13,19;UBERON:0003929,3.57e-12,54;UBERON:0008835,1.16e-11,22;UBERON:0003894,1.16e-11,22;UBERON:0009854,3.91e-11,23;UBERON:0007499,3.33e-10,25;UBERON:0005409,5.20e-10,25;UBERON:0009856,8.60e-10,26;UBERON:0004921,1.10e-09,118;UBERON:0005911,4.70e-09,82;UBERON:0001007,1.20e-08,145;UBERON:0001555,1.20e-08,145;UBERON:0007026,1.20e-08,145;UBERON:0001242,1.22e-08,4;UBERON:0001262,1.22e-08,4;UBERON:0004786,1.22e-08,4;UBERON:0004808,1.22e-08,4;UBERON:0001277,1.22e-08,4;UBERON:0002365,3.95e-08,31;UBERON:0002330,3.95e-08,31;UBERON:0000485,4.90e-08,9;UBERON:0004119,1.40e-07,160;UBERON:0000925,1.40e-07,160;UBERON:0006595,1.40e-07,160;UBERON:0000310,1.67e-07,10;UBERON:0002368,3.84e-07,35;UBERON:0000160,6.49e-07,17;UBERON:0001443,7.35e-07,11 | |||
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| ||
|short_description=p8@STARD10 | |||
}} | }} |
Latest revision as of 01:49, 20 September 2015
Short description: | p8@STARD10 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_STARD10_5end |
Coexpression cluster: | C2162_gastric_Hepatocyte_Intestinal_liver_Prostate_breast_colon |
Association with transcript: | 25bp_to_ENST00000535267_5end |
EntrezGene: | STARD10 |
HGNC: | 10666 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 2.63e-15 | 12 |
endodermal cell | 2.81e-11 | 58 |
intestinal epithelial cell | 1.22e-08 | 4 |
epithelial cell | 4.31e-07 | 253 |
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 5.01e-18 | 4 |
breast cancer | 5.01e-18 | 4 |
adenocarcinoma | 1.33e-10 | 25 |
carcinoma | 1.61e-09 | 106 |
gastrointestinal system cancer | 1.12e-08 | 14 |