FFCP PHASE1:Hg19::chr17:38652393..38652403,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=84951 | |EntrezGene=84951 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=24352 | |HGNC=24352 | ||
|TSSclassifier=strong | |||
|UniProt=Q8IZW8 | |UniProt=Q8IZW8 | ||
|association_with_transcript=-106bp_to_BC018706_5end | |association_with_transcript=-106bp_to_BC018706_5end | ||
|cluster_id=chr17:38652393..38652403,- | |||
|coexpression_cluster_id=C436 | |||
|description=CAGE_peak_16_at_TNS4_5end | |description=CAGE_peak_16_at_TNS4_5end | ||
|id=chr17:38652393..38652403,- | |id=chr17:38652393..38652403,- | ||
|ontology_enrichment_celltype=CL:0002076!3.87e-23!43;CL:0000066!4.71e-19!254;CL:0002368!1.73e-16!13;CL:0000223!2.92e-15!59;CL:0002159!1.50e-12!13;CL:0000244!2.59e-11!4;CL:0000731!2.59e-11!4;CL:0002328!8.65e-10!3;CL:0000622!9.35e-10!5;CL:0000362!5.25e-09!8;CL:0002251!7.54e-09!21;CL:0002621!9.32e-09!3;CL:0002541!1.18e-08!3;CL:0002202!3.76e-08!9;CL:0002632!3.76e-08!9;CL:0000154!4.15e-08!6;CL:0000240!1.06e-07!6;CL:0000311!1.06e-07!6;CL:0000079!1.06e-07!6;CL:0000237!1.06e-07!6;CL:0000036!1.06e-07!6;CL:0000357!1.06e-07!6;CL:0000114!1.06e-07!6;CL:0000317!4.01e-07!2;CL:1000448!4.01e-07!2;CL:0002308!4.01e-07!2;CL:0002140!4.01e-07!2 | |ontology_enrichment_celltype=CL:0002076!3.87e-23!43;CL:0000066!4.71e-19!254;CL:0002368!1.73e-16!13;CL:0000223!2.92e-15!59;CL:0002159!1.50e-12!13;CL:0000244!2.59e-11!4;CL:0000731!2.59e-11!4;CL:0002328!8.65e-10!3;CL:0000622!9.35e-10!5;CL:0000362!5.25e-09!8;CL:0002251!7.54e-09!21;CL:0002621!9.32e-09!3;CL:0002541!1.18e-08!3;CL:0002202!3.76e-08!9;CL:0002632!3.76e-08!9;CL:0000154!4.15e-08!6;CL:0000240!1.06e-07!6;CL:0000311!1.06e-07!6;CL:0000079!1.06e-07!6;CL:0000237!1.06e-07!6;CL:0000036!1.06e-07!6;CL:0000357!1.06e-07!6;CL:0000114!1.06e-07!6;CL:0000317!4.01e-07!2;CL:1000448!4.01e-07!2;CL:0002308!4.01e-07!2;CL:0002140!4.01e-07!2 | ||
|ontology_enrichment_celltype_v019=CL:0002328;4.30e-34;3!CL:0002202;7.13e-31;9!CL:0002632;7.13e-31;9!CL:0002368;2.32e-30;13!CL:0000317;8.47e-24;2!CL:1000448;8.47e-24;2!CL:0002308;8.47e-24;2!CL:0002140;8.47e-24;2!CL:0002076;1.34e-21;42!CL:0000622;7.54e-21;5!CL:0000362;2.76e-20;9!CL:0000154;1.75e-17;6!CL:0002231;8.12e-16;3!CL:0000307;8.12e-16;3!CL:0002159;3.85e-13;14!CL:0000150;7.42e-12;9!CL:0000312;7.27e-10;5!CL:0000240;2.29e-08;6!CL:0000311;2.29e-08;6!CL:0000079;2.29e-08;6!CL:0000237;2.29e-08;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002328,1.96e-34,3;CL:0002202,4.49e-31,9;CL:0002632,4.49e-31,9;CL:0002368,1.75e-30,13;CL:0002076,2.80e-30,42;CL:0000317,8.98e-24,2;CL:1000448,8.98e-24,2;CL:0002308,8.98e-24,2;CL:0002140,8.98e-24,2;CL:0000223,1.54e-21,58;CL:0000622,7.30e-21,5;CL:0000362,3.90e-20,9;CL:0000154,1.70e-17,6;CL:0000068,7.83e-16,3;CL:0000069,7.83e-16,3;CL:0000307,7.83e-16,3;CL:0000377,7.83e-16,3;CL:0002231,8.44e-16,3;CL:0002159,4.80e-13,14;CL:0000150,7.29e-12,9;CL:0000066,1.89e-10,253;CL:0000312,9.70e-10,5;CL:0000240,2.91e-08,6;CL:0000311,2.91e-08,6;CL:0000079,2.91e-08,6;CL:0000237,2.91e-08,6;CL:0000036,2.91e-08,6;CL:0000357,2.91e-08,6;CL:0000114,2.91e-08,6;CL:0002321,8.43e-08,250 | |||
|ontology_enrichment_development_v019=CL:0000377;8.12e-16;3!CL:0000223;3.91e-12;58!CL:0000357;2.29e-08;6!CL:0000114;2.29e-08;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001004!1.61e-16!72;UBERON:0004119!2.72e-14!169;UBERON:0000925!2.72e-14!169;UBERON:0006595!2.72e-14!169;UBERON:0000365!1.57e-13!5;UBERON:0000065!3.83e-13!53;UBERON:0001737!9.18e-13!9;UBERON:0005910!3.31e-11!6;UBERON:0005631!7.08e-11!14;UBERON:0000158!7.08e-11!14;UBERON:0008947!2.21e-10!38;UBERON:0003258!2.21e-10!38;UBERON:0004815!8.65e-10!3;UBERON:0002031!8.65e-10!3;UBERON:0000072!3.06e-09!46;UBERON:0007196!5.06e-09!14;UBERON:0001558!5.06e-09!14;UBERON:0001949!9.32e-09!3;UBERON:0000476!1.18e-08!3;UBERON:0000920!1.18e-08!3;UBERON:0000161!2.74e-08!35;UBERON:0001007!4.84e-08!155;UBERON:0001555!4.84e-08!155;UBERON:0007026!4.84e-08!155;UBERON:0002185!2.08e-07!4;UBERON:0003102!3.73e-07!95;UBERON:0002419!4.01e-07!2;UBERON:0007771!4.01e-07!2;UBERON:0003297!4.01e-07!2;UBERON:0001821!4.01e-07!2;UBERON:0003487!4.01e-07!2;UBERON:0001820!4.01e-07!2;UBERON:0005089!4.01e-07!2;UBERON:0005088!4.01e-07!2;UBERON:0001557!4.52e-07!19;UBERON:0001003!6.96e-07!14;UBERON:0007376!6.96e-07!14;UBERON:0007383!6.96e-07!14 | |||
|ontology_enrichment_uberon_v019=UBERON:0004815;4.30e-34;3!UBERON:0002031;4.30e-34;3!UBERON:0002419;8.47e-24;2!UBERON:0007771;8.47e-24;2!UBERON:0003297;8.47e-24;2!UBERON:0001821;8.47e-24;2!UBERON:0003487;8.47e-24;2!UBERON:0001820;8.47e-24;2!UBERON:0002185;9.53e-21;5!UBERON:0007196;1.54e-18;15!UBERON:0001558;1.54e-18;15!UBERON:0000485;5.28e-15;7!UBERON:0001003;2.79e-12;15!UBERON:0007376;2.79e-12;15!UBERON:0010371;5.96e-09;31!UBERON:0004807;2.47e-08;22!UBERON:0005178;2.55e-08;34!UBERON:0002224;2.55e-08;34!UBERON:0005181;2.14e-07;35!UBERON:0003126;2.73e-07;7!UBERON:0001005;2.73e-07;7!UBERON:0000072;7.61e-07;37 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004815,1.96e-34,3;UBERON:0002031,1.96e-34,3;UBERON:0002419,8.98e-24,2;UBERON:0007771,8.98e-24,2;UBERON:0003297,8.98e-24,2;UBERON:0001821,8.98e-24,2;UBERON:0003487,8.98e-24,2;UBERON:0001820,8.98e-24,2;UBERON:0005089,8.98e-24,2;UBERON:0005088,8.98e-24,2;UBERON:0002185,5.96e-21,5;UBERON:0007196,1.17e-18,15;UBERON:0001558,1.17e-18,15;UBERON:0001003,3.42e-12,15;UBERON:0007376,3.42e-12,15;UBERON:0007383,3.42e-12,15;UBERON:0000485,6.53e-12,9;UBERON:0001004,5.49e-11,74;UBERON:0005153,1.73e-10,37;UBERON:0004119,3.38e-08,160;UBERON:0000925,3.38e-08,160;UBERON:0006595,3.38e-08,160;UBERON:0005178,3.49e-08,34;UBERON:0002224,3.49e-08,34;UBERON:0005157,3.59e-08,47;UBERON:0005181,6.03e-08,35;UBERON:0003102,6.40e-08,99;UBERON:0000161,1.54e-07,36;UBERON:0008947,2.63e-07,38;UBERON:0003258,2.63e-07,38;UBERON:0003126,2.69e-07,7;UBERON:0001005,2.69e-07,7;UBERON:0000065,4.56e-07,54 | |||
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| ||
|short_description=p16@TNS4 | |short_description=p16@TNS4 | ||
}} | }} |
Latest revision as of 02:17, 20 September 2015
Short description: | p16@TNS4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_16_at_TNS4_5end |
Coexpression cluster: | C436_Sebocyte_Prostate_Keratinocyte_Urothelial_Small_Mammary_salivary |
Association with transcript: | -106bp_to_BC018706_5end |
EntrezGene: | TNS4 |
HGNC: | 24352 |
UniProt: | Q8IZW8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lower respiratory tract epithelium | 1.96e-34 | 3 |
epithelium of bronchus | 1.96e-34 | 3 |
skin gland | 8.98e-24 | 2 |
epidermis gland | 8.98e-24 | 2 |
gland of integumental system | 8.98e-24 | 2 |
sebaceous gland | 8.98e-24 | 2 |
skin sebaceous gland | 8.98e-24 | 2 |
sweat gland | 8.98e-24 | 2 |
sweat gland placode | 8.98e-24 | 2 |
sebaceous gland placode | 8.98e-24 | 2 |
bronchus | 5.96e-21 | 5 |
tracheobronchial tree | 1.17e-18 | 15 |
lower respiratory tract | 1.17e-18 | 15 |
skin epidermis | 3.42e-12 | 15 |
outer epithelium | 3.42e-12 | 15 |
enveloping layer of ectoderm | 3.42e-12 | 15 |
simple columnar epithelium | 6.53e-12 | 9 |
respiratory system | 5.49e-11 | 74 |
epithelial bud | 1.73e-10 | 37 |
endoderm-derived structure | 3.38e-08 | 160 |
endoderm | 3.38e-08 | 160 |
presumptive endoderm | 3.38e-08 | 160 |
thoracic cavity element | 3.49e-08 | 34 |
thoracic cavity | 3.49e-08 | 34 |
epithelial fold | 3.59e-08 | 47 |
thoracic segment organ | 6.03e-08 | 35 |
surface structure | 6.40e-08 | 99 |
orifice | 1.54e-07 | 36 |
respiratory primordium | 2.63e-07 | 38 |
endoderm of foregut | 2.63e-07 | 38 |
trachea | 2.69e-07 | 7 |
respiratory airway | 2.69e-07 | 7 |
respiratory tract | 4.56e-07 | 54 |