FFCP PHASE1:Hg19::chr1:205498381..205498392,+: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=5129 | |EntrezGene=5129 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8751 | |HGNC=8751 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-6bp_to_uc001hct.2_5end | |||
|cluster_id=chr1:205498381..205498392,+ | |||
|description=CAGE_peak_24_at_CDK18_5end | |||
|id=chr1:205498381..205498392,+ | |||
|ontology_enrichment_celltype=CL:0002322!4.70e-11!5 | |||
|ontology_enrichment_celltype_v019=CL:0000333;3.60e-11;5!CL:0000138;1.32e-09;6!CL:0000153;7.91e-07;9!CL:0000447;7.91e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000058,1.22e-09,6;CL:0000138,1.22e-09,6;CL:0000153,7.48e-07,9;CL:0000447,7.48e-07,9 | |||
|ontology_enrichment_development_v019=UBERON:0006215;2.40e-66;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3371;2.41e-50;1!DOID:4549;2.41e-50;1!DOID:5861;2.41e-50;1!DOID:6496;2.41e-50;1!DOID:201;1.32e-09;6!DOID:0060100;1.32e-09;6!DOID:169;1.57e-09;6 | |||
|ontology_enrichment_disease_v019_2=DOID:3371,1.46e-50,1;DOID:4549,1.46e-50,1;DOID:5861,1.46e-50,1;DOID:6496,1.46e-50,1;DOID:201,1.22e-09,6;DOID:0060100,1.22e-09,6;DOID:169,1.57e-09,6 | |||
|ontology_enrichment_uberon=UBERON:0000073!2.87e-11!94;UBERON:0001016!2.87e-11!94;UBERON:0001017!1.41e-08!82;UBERON:0005743!5.28e-08!86;UBERON:0002360!1.40e-07!2;UBERON:0000094!1.40e-07!2;UBERON:0007645!1.40e-07!2;UBERON:0004733!3.18e-07!12;UBERON:0002028!3.18e-07!12;UBERON:0007277!3.18e-07!12;UBERON:0000013!6.35e-07!5;UBERON:0002410!6.35e-07!5;UBERON:0001049!6.54e-07!57;UBERON:0005068!6.54e-07!57;UBERON:0006241!6.54e-07!57;UBERON:0007135!6.54e-07!57;UBERON:0004121!9.02e-07!169 | |||
|ontology_enrichment_uberon_v019=UBERON:0002037;7.07e-34;6!UBERON:0002680;5.13e-23;9!UBERON:0001895;5.13e-23;9!UBERON:0002418;8.00e-18;3!UBERON:0004755;8.00e-18;3!UBERON:0004733;1.44e-17;12!UBERON:0002028;1.44e-17;12!UBERON:0004732;2.63e-16;13!UBERON:0000013;3.60e-11;5!UBERON:0002410;3.60e-11;5!UBERON:0000010;8.85e-07;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002037,8.35e-34,6;UBERON:0006215,8.35e-34,6;UBERON:0002680,5.74e-23,9;UBERON:0001895,5.74e-23,9;UBERON:0010092,5.74e-23,9;UBERON:0002418,6.76e-18,3;UBERON:0004755,6.76e-18,3;UBERON:0004733,1.57e-17,12;UBERON:0002028,1.57e-17,12;UBERON:0007277,1.57e-17,12;UBERON:0004732,2.84e-16,13;UBERON:0003076,2.94e-14,15;UBERON:0003057,2.94e-14,15;UBERON:0000013,3.60e-11,5;UBERON:0002410,3.60e-11,5;UBERON:0000010,8.85e-07,8 | |||
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| ||
|short_description=p24@CDK18 | |||
}} | }} |
Latest revision as of 03:10, 20 September 2015
Short description: | p24@CDK18 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_24_at_CDK18_5end |
Coexpression cluster: | NA |
Association with transcript: | -6bp_to_uc001hct.2_5end |
EntrezGene: | CDK18 |
HGNC: | 8751 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chondroblast | 1.22e-09 | 6 |
chondrocyte | 1.22e-09 | 6 |
GAG secreting cell | 7.48e-07 | 9 |
carbohydrate secreting cell | 7.48e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
cerebellum | 8.35e-34 | 6 |
rhombic lip | 8.35e-34 | 6 |
regional part of metencephalon | 5.74e-23 | 9 |
metencephalon | 5.74e-23 | 9 |
future metencephalon | 5.74e-23 | 9 |
cartilage tissue | 6.76e-18 | 3 |
skeletal tissue | 6.76e-18 | 3 |
segmental subdivision of hindbrain | 1.57e-17 | 12 |
hindbrain | 1.57e-17 | 12 |
presumptive hindbrain | 1.57e-17 | 12 |
segmental subdivision of nervous system | 2.84e-16 | 13 |
posterior neural tube | 2.94e-14 | 15 |
chordal neural plate | 2.94e-14 | 15 |
sympathetic nervous system | 3.60e-11 | 5 |
autonomic nervous system | 3.60e-11 | 5 |
peripheral nervous system | 8.85e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
chondrosarcoma | 1.46e-50 | 1 |
extraosseous chondrosarcoma | 1.46e-50 | 1 |
myxoid chondrosarcoma | 1.46e-50 | 1 |
extraskeletal myxoid chondrosarcoma | 1.46e-50 | 1 |
connective tissue cancer | 1.22e-09 | 6 |
musculoskeletal system cancer | 1.22e-09 | 6 |
neuroendocrine tumor | 1.57e-09 | 6 |