FFCP PHASE1:Hg19::chr3:126675882..126675901,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=84303 | |EntrezGene=84303 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28184 | |HGNC=28184 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=29bp_to_ENST00000510044_5end | |association_with_transcript=29bp_to_ENST00000510044_5end | ||
|cluster_id=chr3:126675882..126675901,+ | |||
|coexpression_cluster_id=C143 | |||
|description=CAGE_peak_2_at_CHCHD6_5end | |description=CAGE_peak_2_at_CHCHD6_5end | ||
|id=chr3:126675882..126675901,+ | |id=chr3:126675882..126675901,+ | ||
|ontology_enrichment_celltype=CL:0000148!1.22e-20!10;CL:0000541!1.22e-20!10;CL:0000147!1.20e-18!14;CL:0002619!2.51e-14!3;CL:0002567!8.76e-14!3;CL:0000235!6.03e-11!10;CL:0000710!8.37e-10!20;CL:0002274!3.52e-08!5;CL:0000457!3.52e-08!5;CL:0002191!3.52e-08!5;CL:0000097!3.52e-08!5;CL:0000831!3.52e-08!5;CL:0002028!3.52e-08!5;CL:0000839!1.96e-07!70;CL:0000557!2.71e-07!71;CL:0000075!5.36e-07!27 | |ontology_enrichment_celltype=CL:0000148!1.22e-20!10;CL:0000541!1.22e-20!10;CL:0000147!1.20e-18!14;CL:0002619!2.51e-14!3;CL:0002567!8.76e-14!3;CL:0000235!6.03e-11!10;CL:0000710!8.37e-10!20;CL:0002274!3.52e-08!5;CL:0000457!3.52e-08!5;CL:0002191!3.52e-08!5;CL:0000097!3.52e-08!5;CL:0000831!3.52e-08!5;CL:0002028!3.52e-08!5;CL:0000839!1.96e-07!70;CL:0000557!2.71e-07!71;CL:0000075!5.36e-07!27 | ||
|ontology_enrichment_celltype_v019=CL:0000235;1.47e-36;6!CL:0000148;5.77e-31;10!CL:0002619;1.22e-27;3!CL:0000147;5.06e-22;14!CL:0000710;2.68e-15;20!CL:0002567;8.33e-13;3!CL:0000075;3.22e-11;27!CL:0002566;4.85e-10;1!CL:0000097;1.08e-07;5!CL:0002077;1.33e-07;34 | |||
|ontology_enrichment_celltype_v019_2=CL:0000235,1.53e-36,6;CL:0000148,5.07e-31,10;CL:0000541,5.07e-31,10;CL:0002619,1.22e-27,3;CL:0000147,4.61e-22,14;CL:0000710,2.51e-15,20;CL:0002567,8.34e-13,3;CL:0000839,1.48e-11,66;CL:0000557,2.31e-11,67;CL:0000075,3.07e-11,27;CL:0000766,1.77e-10,72;CL:0002566,4.44e-10,1;CL:0002077,7.90e-09,34;CL:0002194,1.93e-08,59;CL:0000576,1.93e-08,59;CL:0000040,1.93e-08,59;CL:0000559,1.93e-08,59;CL:0002009,3.91e-08,61;CL:0000097,1.17e-07,5;CL:0002028,1.17e-07,5;CL:0000333,7.04e-07,41 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:1909!9.96e-10!2 | |||
|ontology_enrichment_disease_v019=DOID:1909;3.45e-18;2!DOID:12603;6.91e-10;1 | |||
|ontology_enrichment_disease_v019_2=DOID:1909,3.16e-18,2;DOID:12603,6.91e-10,1 | |||
|ontology_enrichment_uberon=UBERON:0002193!7.42e-07!112;UBERON:0002390!7.96e-07!102;UBERON:0003061!7.96e-07!102 | |ontology_enrichment_uberon=UBERON:0002193!7.42e-07!112;UBERON:0002390!7.96e-07!102;UBERON:0003061!7.96e-07!102 | ||
|ontology_enrichment_uberon_v019=UBERON:0000029;1.03e-09;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,7.45e-10,76;UBERON:0000029,9.82e-10,1;UBERON:0002405,1.81e-09,93;UBERON:0001474,4.97e-09,82;UBERON:0004765,4.23e-08,90;UBERON:0002193,6.39e-08,108;UBERON:0002390,2.54e-07,98;UBERON:0003061,2.54e-07,98;UBERON:0001434,3.80e-07,100 | |||
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| ||
|short_description=p2@CHCHD6 | |short_description=p2@CHCHD6 | ||
}} | }} |
Latest revision as of 04:47, 20 September 2015
Short description: | p2@CHCHD6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_CHCHD6_5end |
Coexpression cluster: | C143_Monocytederived_CD14_Macrophage_Dendritic_Basophils_CD14CD16_Osteoblast |
Association with transcript: | 29bp_to_ENST00000510044_5end |
EntrezGene: | CHCHD6 |
HGNC: | 28184 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
macrophage | 1.53e-36 | 6 |
melanocyte | 5.07e-31 | 10 |
melanoblast | 5.07e-31 | 10 |
adult endothelial progenitor cell | 1.22e-27 | 3 |
pigment cell | 4.61e-22 | 14 |
neurecto-epithelial cell | 2.51e-15 | 20 |
light melanocyte | 8.34e-13 | 3 |
myeloid lineage restricted progenitor cell | 1.48e-11 | 66 |
granulocyte monocyte progenitor cell | 2.31e-11 | 67 |
columnar/cuboidal epithelial cell | 3.07e-11 | 27 |
myeloid leukocyte | 1.77e-10 | 72 |
dark melanocyte | 4.44e-10 | 1 |
ecto-epithelial cell | 7.90e-09 | 34 |
monopoietic cell | 1.93e-08 | 59 |
monocyte | 1.93e-08 | 59 |
monoblast | 1.93e-08 | 59 |
promonocyte | 1.93e-08 | 59 |
macrophage dendritic cell progenitor | 3.91e-08 | 61 |
mast cell | 1.17e-07 | 5 |
basophil mast progenitor cell | 1.17e-07 | 5 |
migratory neural crest cell | 7.04e-07 | 41 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 7.45e-10 | 76 |
lymph node | 9.82e-10 | 1 |
immune system | 1.81e-09 | 93 |
bone element | 4.97e-09 | 82 |
skeletal element | 4.23e-08 | 90 |
hemolymphoid system | 6.39e-08 | 108 |
hematopoietic system | 2.54e-07 | 98 |
blood island | 2.54e-07 | 98 |
skeletal system | 3.80e-07 | 100 |
Ontology term | p-value | n |
---|---|---|
melanoma | 3.16e-18 | 2 |
acute leukemia | 6.91e-10 | 1 |