FFCP PHASE1:Hg19::chr14:52021378..52021407,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=122786 | |EntrezGene=122786 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19839 | |HGNC=19839 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000555952,ENST00000557001,ENST00000557103_5end | |association_with_transcript=0bp_to_ENST00000555952,ENST00000557001,ENST00000557103_5end | ||
|cluster_id=chr14:52021378..52021407,+ | |||
|coexpression_cluster_id=C2298 | |||
|description=CAGE_peak_3_at_FRMD6_5end | |description=CAGE_peak_3_at_FRMD6_5end | ||
|id=chr14:52021378..52021407,+ | |id=chr14:52021378..52021407,+ | ||
|ontology_enrichment_celltype=CL:0000055!3.31e-34!180;CL:0000057!6.39e-21!75;CL:0000548!4.52e-18!679;CL:0000004!4.52e-18!679;CL:0000255!4.52e-18!679;CL:0000359!6.00e-18!32;CL:0000680!1.31e-17!57;CL:0000056!1.31e-17!57;CL:0000355!1.31e-17!57;CL:0000012!1.35e-17!682;CL:0000192!1.44e-17!42;CL:0000514!1.44e-17!42;CL:0000187!5.32e-16!54;CL:0000183!8.95e-15!59;CL:0000222!2.60e-14!119;CL:0000144!2.97e-14!625;CL:0002620!1.30e-13!23;CL:0000393!2.06e-13!60;CL:0000211!2.06e-13!60;CL:0000220!9.79e-13!246;CL:0002371!2.06e-12!591;CL:0002321!2.36e-12!248;CL:0000003!1.01e-11!722;CL:0002539!8.23e-09!10 | |ontology_enrichment_celltype=CL:0000055!3.31e-34!180;CL:0000057!6.39e-21!75;CL:0000548!4.52e-18!679;CL:0000004!4.52e-18!679;CL:0000255!4.52e-18!679;CL:0000359!6.00e-18!32;CL:0000680!1.31e-17!57;CL:0000056!1.31e-17!57;CL:0000355!1.31e-17!57;CL:0000012!1.35e-17!682;CL:0000192!1.44e-17!42;CL:0000514!1.44e-17!42;CL:0000187!5.32e-16!54;CL:0000183!8.95e-15!59;CL:0000222!2.60e-14!119;CL:0000144!2.97e-14!625;CL:0002620!1.30e-13!23;CL:0000393!2.06e-13!60;CL:0000211!2.06e-13!60;CL:0000220!9.79e-13!246;CL:0002371!2.06e-12!591;CL:0002321!2.36e-12!248;CL:0000003!1.01e-11!722;CL:0002539!8.23e-09!10 | ||
|ontology_enrichment_celltype_v019=CL:0000359;3.27e-22;32!CL:0002620;1.10e-15;23!CL:0000192;2.29e-14;43!CL:0002539;1.25e-11;10!CL:0000187;6.47e-09;55!CL:0000057;9.41e-07;73 | |||
|ontology_enrichment_celltype_v019_2=CL:0000359,2.84e-23,32;CL:0000192,1.19e-19,43;CL:0000514,1.19e-19,43;CL:0000680,2.27e-16,58;CL:0000056,2.27e-16,58;CL:0000355,2.27e-16,58;CL:0002620,1.07e-15,23;CL:0000187,3.25e-15,55;CL:0000393,1.19e-12,61;CL:0000211,1.19e-12,61;CL:0000057,1.73e-12,76;CL:0002539,1.50e-11,10;CL:0000222,1.53e-10,121 | |||
|ontology_enrichment_development_v019=CL:0000514;2.29e-14;43!CL:0000355;3.70e-09;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!8.16e-21!83;UBERON:0002329!8.16e-21!83;UBERON:0003077!8.16e-21!83;UBERON:0003059!8.16e-21!83;UBERON:0007282!8.16e-21!83;UBERON:0009618!8.16e-21!83;UBERON:0007285!8.16e-21!83;UBERON:0005256!7.26e-20!143;UBERON:0000486!2.25e-18!82;UBERON:0004290!3.03e-18!70;UBERON:0001134!2.60e-15!61;UBERON:0002036!2.60e-15!61;UBERON:0003082!2.60e-15!61;UBERON:0002385!2.74e-14!63;UBERON:0001015!2.74e-14!63;UBERON:0000383!2.74e-14!63;UBERON:0002100!1.12e-13!216;UBERON:0001637!2.21e-12!42;UBERON:0003509!2.21e-12!42;UBERON:0004572!2.21e-12!42;UBERON:0000475!3.68e-12!365;UBERON:0004573!2.02e-11!33;UBERON:0004571!2.02e-11!33;UBERON:0003102!2.68e-11!95;UBERON:0000490!4.28e-11!138;UBERON:0002097!8.69e-10!40;UBERON:0002199!3.47e-09!45;UBERON:0002416!3.47e-09!45;UBERON:0004237!8.23e-09!10;UBERON:0004695!8.23e-09!10;UBERON:0002111!8.23e-09!10;UBERON:0004178!8.23e-09!10;UBERON:0002049!1.33e-08!79;UBERON:0007798!1.33e-08!79;UBERON:0001981!2.39e-08!60;UBERON:0007500!2.39e-08!60;UBERON:0004537!2.39e-08!60;UBERON:0006965!2.39e-08!60;UBERON:0003104!2.41e-08!238;UBERON:0009142!2.41e-08!238;UBERON:0003914!4.85e-08!118;UBERON:0004872!6.69e-08!84;UBERON:0000055!1.28e-07!69 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;5.32e-12;33!UBERON:0004571;5.32e-12;33!UBERON:0004237;1.25e-11;10!UBERON:0004695;1.25e-11;10!UBERON:0002111;1.25e-11;10!UBERON:0004178;1.25e-11;10!UBERON:0001637;6.93e-10;42!UBERON:0003509;6.93e-10;42!UBERON:0004572;6.93e-10;42!UBERON:0002097;2.30e-09;41!UBERON:0001135;5.54e-08;15!UBERON:0002199;8.60e-08;46!UBERON:0002416;8.60e-08;46 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002329,1.18e-17,71;UBERON:0003059,1.18e-17,71;UBERON:0007282,1.18e-17,71;UBERON:0004290,1.18e-17,71;UBERON:0009618,1.18e-17,71;UBERON:0003077,3.24e-17,72;UBERON:0007285,3.24e-17,72;UBERON:0000486,4.90e-17,83;UBERON:0007503,6.37e-17,78;UBERON:0007524,8.63e-17,73;UBERON:0001637,8.44e-15,42;UBERON:0003509,8.44e-15,42;UBERON:0004572,8.44e-15,42;UBERON:0001134,1.49e-14,62;UBERON:0002036,1.49e-14,62;UBERON:0003082,1.49e-14,62;UBERON:0002385,9.72e-14,64;UBERON:0001015,9.72e-14,64;UBERON:0000383,9.72e-14,64;UBERON:0004573,1.26e-13,33;UBERON:0004571,1.26e-13,33;UBERON:0005256,5.69e-13,122;UBERON:0002097,5.07e-12,41;UBERON:0002199,1.03e-11,46;UBERON:0002416,1.03e-11,46;UBERON:0000490,1.39e-11,148;UBERON:0004237,1.50e-11,10;UBERON:0004695,1.50e-11,10;UBERON:0002111,1.50e-11,10;UBERON:0004178,1.50e-11,10;UBERON:0002100,7.25e-11,199;UBERON:0003104,1.23e-10,160;UBERON:0009142,1.23e-10,160;UBERON:0007500,4.03e-10,59;UBERON:0001981,4.03e-10,59;UBERON:0004537,4.03e-10,59;UBERON:0006965,4.03e-10,59;UBERON:0003914,1.85e-09,117;UBERON:0003102,7.24e-09,99;UBERON:0004872,1.57e-08,83;UBERON:0001135,6.72e-08,15;UBERON:0002049,8.14e-08,78;UBERON:0007798,8.14e-08,78;UBERON:0000055,1.25e-07,68 | |||
|phase1_expression=1.09007027562334,1.71280419112787,0.422863212287913,0,0,0,0,0,0,13.2696325710815,3.48900583986214,2.18441372130172,1.58260186937072,0.123766352960047,0.331397375727916,14.7911532219391,16.8754467846714,18.2577522596843,17.0776479576677,0.123121058076788,0,0,0,0.547497700291537,0.753255837568817,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0.50133791063589,0.144846518960824,0,0,0.756278537312543,2.21729397462564,1.31752178539689,0,0,0,0,0,0,0,0,0,0,0.860234595106124,0,0,0,0,0.208994966536811,0,0.35576626268671,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0,2.48485975847659,3.54565432660823,42.6357562218565,0.286836620748814,0.354668382198357,0,2.1349799145941,6.90669135568048,0.311211035399766,0.134710672069688,0.326923806226917,0.151357427644931,0,0.468642863667593,3.43376084513353,3.4228309292667,0.747243402759005,1.05691048779388,3.72307772046703,2.66856532734272,1.42907919878425,0.368502951935304,0.206651562351531,1.18800285728205,0.989067717114227,0.910161361938026,0,0.168336113954066,0,3.3247693858102,0.877955241761676,2.45190236639216,0.901428353439581,1.36118619792025,6.63741652048789,3.41691822109708,3.17897851739343,3.90118424909723,1.95799805553034,3.60696756063881,1.67505170698431,6.07594796068558,1.16924406193438,6.56327813034698,3.31379635112278,0.323292113637624,3.90510551768276,3.42557133973977,4.23901480776219,3.28543450377605,3.81844568827169,2.29443676311203,0,0,0,0,0,0,1.56449532329816,0,1.38134921352481,0.464367928031979,2.88751792667834,0,0,0,0,0,0,0,0,0,0,1.40241773803446,0.8231480226628,0,0,0,0,0,0.122988438543114,0,0,0,0.201057944823262,0,0.325808305310325,0,1.44331342025273,0.115930404975077,0.939269553886573,0.577465791044295,0.462985512576611,0,0,0,0,0,0,4.68669169933885,5.54341023056236,0.567100388969546,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0.514137463516618,0,0,1.00917975910825,0.43596006883328,3.2268845761218,2.32689088364,0,5.917119267892,0.531876233169741,0,0.771622122786426,0,0.532844358032199,0.285955987316295,0,0,6.5147236858747,0,0,0.602878754119172,4.35766729300147,0.199945982364114,0,0,0,1.4377491329495,0,0,24.757603440156,0.61642896765115,5.55088986043676,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0.12269149171914,0,0,0.415941723061614,1.96271887676878,0.946214490203608,1.17141414992713,0,0,0,0,0.921845842708516,1.99832313276591,0.391602314925481,0,0,0,0,0.303127571446259,1.66435439510497,0.604780586659361,1.73675465473144,2.30192959932094,0.841980283299221,0.768834895534206,2.04682899626681,2.41280881715411,1.48418066444991,2.62156479464514,1.42049380250502,1.23190734020714,1.55776328755086,0.813472649219715,0.120859449591622,2.6065841139427,0.0920809889358963,1.37777337797528,3.09554985611419,0.393373244878272,7.21919380651859,14.7099293869432,0,0,7.59971728028705,0,0,5.61381381865562,0,0.812839312631559,0,0.764628819135115,1.66215201785745,3.35812132083267,0,0,2.3080511260475,0,0.976135183992909,0.206082023295445,1.73981983154852,0.82509499920588,3.44559322797703,0,1.6068392984416,0.193341436584244,0.462145851343933,0.460511024178389,6.06480918931935,0.214840489736547,0.290033387828457,1.96021243057032,0,0.165284915360978,0,1.02090169995667,0,6.97268323945929,5.66662224295152,2.0911118104818,3.08033580176089,20.2276291520468,3.47973196830029,2.59453906745488,13.5968642404892,1.116475108079,3.79655309662471,0.762520775695299,0.767693373934002,0.42793898803392,0,2.35484592059769,0.539617372749944,0,1.29593642580255,15.365868599572,11.0957224821106,7.16139375606268,0,3.89941583410055,2.11300293513511,1.63799893689583,0.141405431953713,0,1.10273068709225,4.64407282668854,6.13831239355268,2.31510213706675,0,11.7688018638368,5.26699946769575,1.40847801266121,1.29070216983646,1.3754865741837,10.3434604929563,2.12856638442359,0,0,0,0,0,0,0,0.376575203107117,0.43050537267123,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.27308917445131,6.44610108791763,0,0,0,0,19.9242581991002,0,0,0,0,0,0.613612095012929,0,16.7961377337376,50.7756183982397,0,0,0,0,3.33410970433911,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.96249345202203,0,0,0,18.5020672644513,34.4406951191002,14.9249737285218,0,0,0,0,0,0,0,0,1.05499032264014,3.7543545876604,0,0,0,0,0,0,0,0,0,0,0,0,0,0.242780379534093,0,0,0,0,0,0,1.99396161812156,0,2.5114633472578,1.19472429772959,0,0.554698692052555,0,0,71.8238454288321,0,0,0,0,0,0,0,0,24.3934625871217,39.9416369523009,0,0,7.77540556439877,0,0,0,0,0,0.432164393964449,8.82193002514571,0,1.9026588850306,1.882851233622,0.101998217636322,0.288950589901519,0,0,0,0.859530882839914,0,0,0,0,0,0,0,0,6.84569778730567,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.633602019116439,0,53.3524248548058,0,0,0,9.77399283156683,4.32110745600634,5.87857248196936,8.38111340937412,0,133.584209079771,0.566560457600628,0,0,0,0,0,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| ||
|short_description=p3@FRMD6 | |short_description=p3@FRMD6 | ||
}} | }} |
Latest revision as of 04:59, 20 September 2015
Short description: | p3@FRMD6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_FRMD6_5end |
Coexpression cluster: | C2298_pagetoid_liposarcoma_mesothelioma_mucinous_epidermoid_large_bile |
Association with transcript: | 0bp_to_ENST00000555952, ENST00000557001, ENST00000557103_5end |
EntrezGene: | FRMD6 |
HGNC: | 19839 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 2.84e-23 | 32 |
smooth muscle cell | 1.19e-19 | 43 |
smooth muscle myoblast | 1.19e-19 | 43 |
muscle precursor cell | 2.27e-16 | 58 |
myoblast | 2.27e-16 | 58 |
multi-potent skeletal muscle stem cell | 2.27e-16 | 58 |
skin fibroblast | 1.07e-15 | 23 |
muscle cell | 3.25e-15 | 55 |
electrically responsive cell | 1.19e-12 | 61 |
electrically active cell | 1.19e-12 | 61 |
fibroblast | 1.73e-12 | 76 |
aortic smooth muscle cell | 1.50e-11 | 10 |
mesodermal cell | 1.53e-10 | 121 |