FFCP PHASE1:Hg19::chr14:52118694..52118708,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=122786 | |EntrezGene=122786 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19839 | |HGNC=19839 | ||
|TSSclassifier=strong | |||
|UniProt=G3V517 | |UniProt=G3V517 | ||
|association_with_transcript=0bp_to_ENST00000554778_5end | |association_with_transcript=0bp_to_ENST00000554778_5end | ||
|cluster_id=chr14:52118694..52118708,+ | |||
|description=CAGE_peak_2_at_FRMD6_5end | |description=CAGE_peak_2_at_FRMD6_5end | ||
|id=chr14:52118694..52118708,+ | |id=chr14:52118694..52118708,+ |
Latest revision as of 05:17, 20 September 2015
Short description: | p2@FRMD6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_FRMD6_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000554778_5end |
EntrezGene: | FRMD6 |
HGNC: | 19839 |
UniProt: | G3V517 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p2@FRMD6 |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.46e-25 | 76 |
mesodermal cell | 3.49e-21 | 121 |
muscle precursor cell | 1.85e-16 | 58 |
myoblast | 1.85e-16 | 58 |
multi-potent skeletal muscle stem cell | 1.85e-16 | 58 |
muscle cell | 3.41e-15 | 55 |
vascular associated smooth muscle cell | 5.34e-15 | 32 |
skin fibroblast | 2.39e-14 | 23 |
smooth muscle cell | 5.16e-14 | 43 |
smooth muscle myoblast | 5.16e-14 | 43 |
Showing 1 to 10 of 21 entries
Ontology term | p-value | n |
---|---|---|
vasculature | 1.33e-18 | 78 |
vascular system | 1.33e-18 | 78 |
somite | 1.00e-17 | 71 |
presomitic mesoderm | 1.00e-17 | 71 |
presumptive segmental plate | 1.00e-17 | 71 |
dermomyotome | 1.00e-17 | 71 |
trunk paraxial mesoderm | 1.00e-17 | 71 |
dense mesenchyme tissue | 2.15e-17 | 73 |
paraxial mesoderm | 3.58e-17 | 72 |
presumptive paraxial mesoderm | 3.58e-17 | 72 |
Showing 1 to 10 of 50 entries