FFCP PHASE2:Hg19::chr7:100271355..100271371,+: Difference between revisions
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(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:2783 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding |HGNC=HGNC:4398 |TSSclass...") |
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| Line 2: | Line 2: | ||
|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=2783 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=4398 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=E7EP32,P62879,Q6FHM2 | ||
|association_with_transcript=0bp_to_ENST00000424361,ENST00000436220,NM_005273,uc003uwb.2,uc003uwc.2,uc003uwd.2,uc010lhd.2,uc010lhe.2,uc010lhf.2_5end | |association_with_transcript=0bp_to_ENST00000424361,ENST00000436220,NM_005273,uc003uwb.2,uc003uwc.2,uc003uwd.2,uc010lhd.2,uc010lhe.2,uc010lhf.2_5end | ||
|cluster_id=chr7:100271355..100271371,+ | |cluster_id=chr7:100271355..100271371,+ | ||
Latest revision as of 08:19, 20 September 2015
| Short description: | p2@GNB2 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_2_at_GNB2_5end |
| Coexpression cluster: | NA |
| Association with transcript: | 0bp_to_ENST00000424361, ENST00000436220, NM_005273, uc003uwb.2, uc003uwc.2, uc003uwd.2, uc010lhd.2, uc010lhe.2, uc010lhf.2_5end |
| EntrezGene: | GNB2 |
| HGNC: | 4398 |
| UniProt: | E7EP32P62879Q6FHM2 |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p2@GNB2 |
|---|
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| mesodermal cell | 9.98e-14 | 121 |
| embryonic cell | 4.20e-13 | 250 |
| electrically responsive cell | 5.00e-11 | 61 |
| electrically active cell | 5.00e-11 | 61 |
| muscle precursor cell | 2.74e-10 | 58 |
| myoblast | 2.74e-10 | 58 |
| multi-potent skeletal muscle stem cell | 2.74e-10 | 58 |
| smooth muscle cell | 3.54e-10 | 43 |
| smooth muscle myoblast | 3.54e-10 | 43 |
| muscle cell | 3.78e-10 | 55 |
Showing 1 to 10 of 11 entries
| Ontology term | p-value | n |
|---|---|---|
| epithelial vesicle | 3.92e-14 | 78 |
| dense mesenchyme tissue | 1.21e-11 | 73 |
| somite | 1.59e-11 | 71 |
| presomitic mesoderm | 1.59e-11 | 71 |
| presumptive segmental plate | 1.59e-11 | 71 |
| dermomyotome | 1.59e-11 | 71 |
| trunk paraxial mesoderm | 1.59e-11 | 71 |
| paraxial mesoderm | 2.64e-11 | 72 |
| presumptive paraxial mesoderm | 2.64e-11 | 72 |
| multilaminar epithelium | 1.03e-10 | 83 |
Showing 1 to 10 of 41 entries
