FFCP PHASE1:Hg19::chr7:100547126..100547133,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4584,57876 | |EntrezGene=4584,57876 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13384,7513 | |HGNC=13384,7513 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-53bp_to_ENST00000483366_5end | |association_with_transcript=-53bp_to_ENST00000483366_5end | ||
|cluster_id=chr7:100547126..100547133,+ | |||
|coexpression_cluster_id=C124 | |||
|description=CAGE_peak_17_at_MUC3A_5end,CAGE_peak_17_at_MUC3B_5end | |description=CAGE_peak_17_at_MUC3A_5end,CAGE_peak_17_at_MUC3B_5end | ||
|id=chr7:100547126..100547133,+ | |id=chr7:100547126..100547133,+ | ||
|ontology_enrichment_celltype=CL:0000039!5.40e-08!7;CL:0000586!5.40e-08!7 | |ontology_enrichment_celltype=CL:0000039!5.40e-08!7;CL:0000586!5.40e-08!7 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006242;2.66e-18;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3493;1.22e-09;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3493,1.33e-09,2 | |||
|ontology_enrichment_uberon=UBERON:0000160!7.40e-10!27;UBERON:0003929!2.25e-09!54;UBERON:0001007!1.09e-08!155;UBERON:0001555!1.09e-08!155;UBERON:0007026!1.09e-08!155;UBERON:0004921!1.76e-08!129;UBERON:0004185!1.76e-08!129;UBERON:0005057!6.94e-08!26;UBERON:0004119!1.14e-07!169;UBERON:0000925!1.14e-07!169;UBERON:0006595!1.14e-07!169;UBERON:0002368!1.34e-07!35;UBERON:0005409!1.83e-07!35;UBERON:0002426!2.09e-07!1;UBERON:0003831!2.09e-07!1;UBERON:0003898!2.09e-07!1;UBERON:0004830!2.09e-07!1;UBERON:0001774!2.09e-07!1;UBERON:0003830!2.09e-07!1;UBERON:0005175!2.09e-07!1;UBERON:0003897!2.09e-07!1;UBERON:0001103!2.09e-07!1;UBERON:0010084!2.09e-07!1;UBERON:0002146!3.02e-07!1;UBERON:0005623!3.02e-07!1;UBERON:0002370!4.35e-07!4;UBERON:0005058!4.35e-07!4;UBERON:0009113!4.35e-07!4;UBERON:0003295!4.35e-07!4;UBERON:0005562!4.35e-07!4;UBERON:0002363!7.40e-07!1;UBERON:0007647!7.40e-07!1;UBERON:0010115!7.40e-07!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0002370;9.92e-34;2!UBERON:0005058;9.92e-34;2!UBERON:0009113;9.92e-34;2!UBERON:0002108;1.05e-30;4!UBERON:0000160;4.84e-23;17!UBERON:0005409;4.56e-18;22!UBERON:0004177;3.84e-14;5!UBERON:0005057;3.84e-14;5!UBERON:0004921;4.85e-11;33!UBERON:0001155;3.30e-08;9!UBERON:0002368;1.24e-07;33!UBERON:0002110;5.80e-07;3!UBERON:0002114;6.14e-07;2!UBERON:0000059;7.15e-07;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002108,9.45e-31,4;UBERON:0000160,4.62e-23,17;UBERON:0002370,2.39e-17,4;UBERON:0005058,2.39e-17,4;UBERON:0009113,2.39e-17,4;UBERON:0003295,2.39e-17,4;UBERON:0005562,2.39e-17,4;UBERON:0005409,5.19e-16,25;UBERON:0003351,6.70e-12,6;UBERON:0004921,1.57e-10,118;UBERON:0001007,1.58e-10,145;UBERON:0001555,1.58e-10,145;UBERON:0007026,1.58e-10,145;UBERON:0004177,2.46e-10,7;UBERON:0005057,2.46e-10,7;UBERON:0004119,1.83e-09,160;UBERON:0000925,1.83e-09,160;UBERON:0006595,1.83e-09,160;UBERON:0001155,3.30e-08,9;UBERON:0002368,8.31e-08,35;UBERON:0003929,1.11e-07,54;UBERON:0000974,1.67e-07,10;UBERON:0003408,1.67e-07,10;UBERON:0001042,1.67e-07,10;UBERON:0009145,1.67e-07,10;UBERON:0002110,5.80e-07,3;UBERON:0006242,5.80e-07,3;UBERON:0002114,6.14e-07,2;UBERON:0006562,6.74e-07,11;UBERON:0009722,6.74e-07,11;UBERON:0007690,6.74e-07,11;UBERON:0000059,7.15e-07,11 | |||
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|short_description=p17@MUC3A,p17@MUC3B | |short_description=p17@MUC3A,p17@MUC3B | ||
}} | }} |
Latest revision as of 14:54, 24 September 2015
Short description: | p17@MUC3A, p17@MUC3B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_17_at_MUC3A_5end, CAGE_peak_17_at_MUC3B_5end |
Coexpression cluster: | C124_small_temporal_duodenum_colon_gall_signet_Hepatocyte |
Association with transcript: | -53bp_to_ENST00000483366_5end |
EntrezGene: | 4584,57876 |
HGNC: | 7513&submit=Submit 13384, 7513 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
small intestine | 9.45e-31 | 4 |
intestine | 4.62e-23 | 17 |
thymus | 2.39e-17 | 4 |
hemolymphoid system gland | 2.39e-17 | 4 |
thymic region | 2.39e-17 | 4 |
pharyngeal gland | 2.39e-17 | 4 |
thymus primordium | 2.39e-17 | 4 |
gastrointestinal system | 5.19e-16 | 25 |
pharyngeal epithelium | 6.70e-12 | 6 |
subdivision of digestive tract | 1.57e-10 | 118 |
digestive system | 1.58e-10 | 145 |
digestive tract | 1.58e-10 | 145 |
primitive gut | 1.58e-10 | 145 |
hemopoietic organ | 2.46e-10 | 7 |
immune organ | 2.46e-10 | 7 |
endoderm-derived structure | 1.83e-09 | 160 |
endoderm | 1.83e-09 | 160 |
presumptive endoderm | 1.83e-09 | 160 |
colon | 3.30e-08 | 9 |
endocrine gland | 8.31e-08 | 35 |
gut epithelium | 1.11e-07 | 54 |
neck | 1.67e-07 | 10 |
gland of gut | 1.67e-07 | 10 |
chordate pharynx | 1.67e-07 | 10 |
pharyngeal region of foregut | 1.67e-07 | 10 |
gallbladder | 5.80e-07 | 3 |
gall bladder primordium | 5.80e-07 | 3 |
duodenum | 6.14e-07 | 2 |
pharynx | 6.74e-07 | 11 |
entire pharyngeal arch endoderm | 6.74e-07 | 11 |
early pharyngeal endoderm | 6.74e-07 | 11 |
large intestine | 7.15e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
signet ring cell adenocarcinoma | 1.33e-09 | 2 |