FFCP PHASE1:Hg19::chr5:134368954..134368971,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt=Q9H5L9 | |UniProt=Q9H5L9 | ||
|association_with_transcript=0bp_to_ENST00000432382,uc003laj.1_5end | |association_with_transcript=0bp_to_ENST00000432382,uc003laj.1_5end | ||
|cluster_id=chr5:134368954..134368971,+ | |||
|description=CAGE_peak_1_at_ENST00000432382_5end,CAGE_peak_1_at_uc003laj.1_5end | |description=CAGE_peak_1_at_ENST00000432382_5end,CAGE_peak_1_at_uc003laj.1_5end | ||
|id=chr5:134368954..134368971,+ | |id=chr5:134368954..134368971,+ | ||
|ontology_enrichment_celltype=CL:0000223!1.61e-10!59;CL:0000066!4.38e-10!254;CL:0002076!3.45e-07!43;CL:0002251!6.35e-07!21 | |ontology_enrichment_celltype=CL:0000223!1.61e-10!59;CL:0000066!4.38e-10!254;CL:0002076!3.45e-07!43;CL:0002251!6.35e-07!21 | ||
|ontology_enrichment_celltype_v019=CL:0002563;4.74e-09;4!CL:0002253;2.60e-08;2!CL:0000182;3.83e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,2.87e-09,4;CL:0002253,1.29e-08,2;CL:0000182,2.34e-07,12 | |||
|ontology_enrichment_development_v019=UBERON:0003104;2.00e-09;31!UBERON:0001041;6.28e-08;30!UBERON:0004161;7.99e-08;11 | |||
|ontology_enrichment_disease=DOID:162!1.61e-37!235;DOID:14566!7.94e-36!239;DOID:0050687!3.32e-34!143;DOID:305!4.65e-34!106;DOID:0050686!5.25e-10!137;DOID:3119!1.03e-07!14;DOID:1749!1.29e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:1036;4.52e-07;8!DOID:3908;5.26e-07;5 | |||
|ontology_enrichment_disease_v019_2=DOID:162,1.08e-11,235;DOID:14566,2.86e-11,239;DOID:305,1.14e-09,106;DOID:0050686,4.68e-07,137;DOID:1036,5.74e-07,8;DOID:3908,7.45e-07,5 | |||
|ontology_enrichment_uberon=UBERON:0001007!1.72e-24!155;UBERON:0001555!1.72e-24!155;UBERON:0007026!1.72e-24!155;UBERON:0004119!1.01e-22!169;UBERON:0000925!1.01e-22!169;UBERON:0006595!1.01e-22!169;UBERON:0004921!5.28e-22!129;UBERON:0004185!5.28e-22!129;UBERON:0000077!5.10e-18!130;UBERON:0000161!1.71e-11!35;UBERON:0003104!2.30e-11!238;UBERON:0009142!2.30e-11!238;UBERON:0001041!3.77e-11!98;UBERON:0001046!4.63e-10!19;UBERON:0000344!4.88e-10!12;UBERON:0001004!6.65e-09!72;UBERON:0005911!8.35e-09!82;UBERON:0005409!1.10e-08!35;UBERON:0000160!2.24e-07!27;UBERON:0003929!2.69e-07!54;UBERON:0000162!3.45e-07!14;UBERON:0001353!3.45e-07!14;UBERON:0000163!3.45e-07!14;UBERON:0006866!3.45e-07!14;UBERON:0000164!3.45e-07!14;UBERON:0000931!3.45e-07!14;UBERON:0002530!7.34e-07!59;UBERON:0002367!8.43e-07!11;UBERON:0010147!8.43e-07!11;UBERON:0009846!8.43e-07!11;UBERON:0003353!8.43e-07!11;UBERON:0004902!8.43e-07!11;UBERON:0003820!8.43e-07!11;UBERON:0009847!8.43e-07!11 | |ontology_enrichment_uberon=UBERON:0001007!1.72e-24!155;UBERON:0001555!1.72e-24!155;UBERON:0007026!1.72e-24!155;UBERON:0004119!1.01e-22!169;UBERON:0000925!1.01e-22!169;UBERON:0006595!1.01e-22!169;UBERON:0004921!5.28e-22!129;UBERON:0004185!5.28e-22!129;UBERON:0000077!5.10e-18!130;UBERON:0000161!1.71e-11!35;UBERON:0003104!2.30e-11!238;UBERON:0009142!2.30e-11!238;UBERON:0001041!3.77e-11!98;UBERON:0001046!4.63e-10!19;UBERON:0000344!4.88e-10!12;UBERON:0001004!6.65e-09!72;UBERON:0005911!8.35e-09!82;UBERON:0005409!1.10e-08!35;UBERON:0000160!2.24e-07!27;UBERON:0003929!2.69e-07!54;UBERON:0000162!3.45e-07!14;UBERON:0001353!3.45e-07!14;UBERON:0000163!3.45e-07!14;UBERON:0006866!3.45e-07!14;UBERON:0000164!3.45e-07!14;UBERON:0000931!3.45e-07!14;UBERON:0002530!7.34e-07!59;UBERON:0002367!8.43e-07!11;UBERON:0010147!8.43e-07!11;UBERON:0009846!8.43e-07!11;UBERON:0003353!8.43e-07!11;UBERON:0004902!8.43e-07!11;UBERON:0003820!8.43e-07!11;UBERON:0009847!8.43e-07!11 | ||
|ontology_enrichment_uberon_v019=UBERON:0001052;1.67e-14;4!UBERON:0004907;1.28e-11;5!UBERON:0000160;2.14e-11;17!UBERON:0000059;5.58e-11;11!UBERON:0005409;7.12e-11;22!UBERON:0004921;4.28e-10;33!UBERON:0001242;4.74e-09;4!UBERON:0001262;4.74e-09;4!UBERON:0004786;4.74e-09;4!UBERON:0004808;4.74e-09;4!UBERON:0001277;4.74e-09;4!UBERON:0000007;9.48e-09;2!UBERON:0003350;1.62e-07;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001052,3.49e-15,4;UBERON:0004921,1.56e-13,118;UBERON:0004907,3.73e-12,5;UBERON:0001007,7.15e-12,145;UBERON:0001555,7.15e-12,145;UBERON:0007026,7.15e-12,145;UBERON:0000160,1.38e-11,17;UBERON:0000059,2.90e-11,11;UBERON:0001046,7.04e-11,19;UBERON:0004119,3.78e-10,160;UBERON:0000925,3.78e-10,160;UBERON:0006595,3.78e-10,160;UBERON:0005409,1.37e-09,25;UBERON:0001242,2.87e-09,4;UBERON:0001262,2.87e-09,4;UBERON:0004786,2.87e-09,4;UBERON:0004808,2.87e-09,4;UBERON:0001277,2.87e-09,4;UBERON:0000007,8.26e-09,2;UBERON:0003350,1.61e-07,8;UBERON:0005911,1.97e-07,82;UBERON:0011216,9.41e-07,223 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.6024118375565,0,0.387336002901508,0.284338464974843,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,1.00267582127178,1.01392563272577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117434498643765,0,0,0,0,0,1.18800285728205,0.247266929278557,0,0,0.168336113954066,0.125118519871964,0,0,0.30648779579902,0,0,0,0,0,0,0,0.515281080091258,0.18611685633159,0,0.0974370051611986,0,0,0.161646056818812,0,0,0.339121184620975,0,0,0,0,0,0.232387885739037,0,0,0,0,0.643240938192885,0,0,0,0.236613600079688,0.505754070234305,0.964044119533928,0.55146986366197,0.217879444092406,0,0.808987848960987,0,0.769494313892781,0,0,0,0,0,0,0,0,0.983907508344908,0,0,0,0,0.0925884451585296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335964256397719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0.797814349754612,1.04007436911366,0,0,0,0.142977993658148,0.542621605391443,0.823240336780769,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205476322550383,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.664225598535437,0,0.434418072340414,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.725156697549733,0,0.460404944679482,0.918515585316854,0.182091168006717,1.44236856455367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.640986253728404,0.742585499285292,0,0,0,0.096670718292122,0,0,0,0,0.580066775656914,0,0.0890320356467374,0,0.192190067365106,0.510450849978337,0,0,0.31481234683064,0,0,0,0,0,0.143124886741991,0,0,0,0,0,0,0,1.43897966066652,0.54907405947211,0.353437207037059,0,0,0,0.48763373908959,0,0,0.136499911407986,3.67654123079653,0,0,0,0,0,0,0,0,0,0.286822704408103,0.0982490410131212,0.35667105148125,0,0.422215270595328,0,0,0,0,0,2.17781969722645,0,0,0,0,0,0,0,0,0,0,0,0,0,0.427296284509893,0,0,1.30062222588003,0,0,0.318852545457645,0,0,0,0,0,0,2.6635582281414,0,0,0,0,0,0,0,0.223676107892416,0,0,0,0,0.270455678475983,1.99843180798692,0,0.561421621224659,0,0.728163130497081,0,1.13654458722565,0,0,0,0,0,0.111308705022906,0,11.8230228551676,0.597743964753209,0,0,0.818149460017238,0,0,0.179736702294654,0.716084698702437,2.04628948090749,0.197286811273867,0,0,0,0,0,0.520855522170466,0.174919999992391,0.724999575434793,0.341380344856499,0.762760950878299,0,0.344743373241465,0,0.347249989866585,0,0,0,0,0,0,1.0893846351899,2.50962739701486,0.0769502585037971,0,0,0.0897576444097721,0,0,0,0,0,0,1.49590513710141,1.1279783030859,1.37243774022418,1.34257269580674,0.37950746544837,0,0,0,2.26164914294305,1.94749775767882,0,0,1.22206028986725,0,0,0,0,1.60515529459758,0,0.729819156862664,0.19566461893209,0.971121518136371,0,0,0,0,1.20258735531594,0.933193722575224,0,0,0,0,0,0.416024019039416,0,0.489961987071888,0,0,0.171986032471617,1.45134496933628,0.950161122120412,0.574808199372465,0.387956065953678,0,0,0.274083849293502,0,0,0.195551382734803,0.160317640503067,0,0.599428828746391,0.432271251462318,0.572682980829578,2.05913997434357,0.576219191952599,0.248505071130865,0.471388069233591,0.135904206073614,0.209205692624666,1.12198039399954,0.288950589901519,0,0,0,1.71906176567983,0,0,0,0,0,0,0,0,0,2.32991899054908,1.81201319306614,1.89556474276683,1.95470277177136,1.08270229666224,0,0,0,0.160753148465019,0,0,0,0,0,0.670869375198532,0,0,1.37280437475228,2.15144807199414,0.383830394638891,0,0,0,0,0,0,0,1.55975789423744,0.511164065356265,0.339936274560377,0,0,0,0,0.513260513652988,0,0,0,0,0,0,0.365377795142688,1.91502377331055,0,0,0,0,0.314108192500469,0,0,0,0,0,0.0620964029413835,0.553394539744923,0.74988244777264,0,0,0,1.87333962322753,0.28984205722165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.521745061811734,0,0,0,0,0,0,0.796191777397232,0,0,0,0,0.192619830407303,0,0.521988583930423,0,0,0,0.179088841081487,0.926404341482917,0,0,0,0.337884881306145,0,0.690860683462397,0,0,0,0,0,0.327609848846413,0,0.211312123358627,0,0,0,0,0,0.279759015438889,0,0.511577485214607,0.862598491173454,0,0,0.33946505990805,0,0,0.558644917973244,0,0.788617450012533,0,0,3.3687002508852,0,0,0,0,0,0,0,0,0.490738592505128,0.235939446695481,1.10057159113007,0.462102664601353,0,0,0.994581110581374,0,0,0,0.785720083444267,0.163771917510097,0.147856086217045,0,0,0,0,0,0.548257766857182,0.496211178389294,0,0.383287282918786,0,0,2.42786241694653,2.50428410486427,0.0887023701626388,0,0.342976018874837,0,0,1.41832609060762,0.222462803784138,0.078493092850514,0,1.68163297988273,1.82631744101899,0,0.9555033757741,0.357382720883282,1.73814972905999,0.116241425368125,0.695433089210318,1.60342272946051,1.45051314914126,0.17071847709395,0,1.29068207646083,0,0,0,0.22910686854405,0,0,0,0.196300467230486,0.121917924982269,0,0.410651227424988,1.1598144313382,0,0,0.198950775161368,0,0.11294608203896,1.64910775118144,0.150962843566674,0.0771741581079447,1.31135736302374,0.470317296361523,0.735444965261716,0.2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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.6024118375565,0,0.387336002901508,0.284338464974843,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,1.00267582127178,1.01392563272577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117434498643765,0,0,0,0,0,1.18800285728205,0.247266929278557,0,0,0.168336113954066,0.125118519871964,0,0,0.30648779579902,0,0,0,0,0,0,0,0.515281080091258,0.18611685633159,0,0.0974370051611986,0,0,0.161646056818812,0,0,0.339121184620975,0,0,0,0,0,0.232387885739037,0,0,0,0,0.643240938192885,0,0,0,0.236613600079688,0.505754070234305,0.964044119533928,0.55146986366197,0.217879444092406,0,0.808987848960987,0,0.769494313892781,0,0,0,0,0,0,0,0,0.983907508344908,0,0,0,0,0.0925884451585296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335964256397719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0.797814349754612,1.04007436911366,0,0,0,0.142977993658148,0.542621605391443,0.823240336780769,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205476322550383,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.664225598535437,0,0.434418072340414,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.725156697549733,0,0.460404944679482,0.918515585316854,0.182091168006717,1.44236856455367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.640986253728404,0.742585499285292,0,0,0,0.096670718292122,0,0,0,0,0.580066775656914,0,0.0890320356467374,0,0.192190067365106,0.510450849978337,0,0,0.31481234683064,0,0,0,0,0,0.143124886741991,0,0,0,0,0,0,0,1.43897966066652,0.54907405947211,0.353437207037059,0,0,0,0.48763373908959,0,0,0.136499911407986,3.67654123079653,0,0,0,0,0,0,0,0,0,0.286822704408103,0.0982490410131212,0.35667105148125,0,0.422215270595328,0,0,0,0,0,2.17781969722645,0,0,0,0,0,0,0,0,0,0,0,0,0,0.427296284509893,0,0,1.30062222588003,0,0,0.318852545457645,0,0,0,0,0,0,2.6635582281414,0,0,0,0,0,0,0,0.223676107892416,0,0,0,0,0.270455678475983,1.99843180798692,0,0.561421621224659,0,0.728163130497081,0,1.13654458722565,0,0,0,0,0,0.111308705022906,0,11.8230228551676,0.597743964753209,0,0,0.818149460017238,0,0,0.179736702294654,0.716084698702437,2.04628948090749,0.197286811273867,0,0,0,0,0,0.520855522170466,0.174919999992391,0.724999575434793,0.341380344856499,0.762760950878299,0,0.344743373241465,0,0.347249989866585,0,0,0,0,0,0,1.0893846351899,2.50962739701486,0.0769502585037971,0,0,0.0897576444097721,0,0,0,0,0,0,1.49590513710141,1.1279783030859,1.37243774022418,1.34257269580674,0.37950746544837,0,0,0,2.26164914294305,1.94749775767882,0,0,1.22206028986725,0,0,0,0,1.60515529459758,0,0.729819156862664,0.19566461893209,0.971121518136371,0,0,0,0,1.20258735531594,0.933193722575224,0,0,0,0,0,0.416024019039416,0,0.489961987071888,0,0,0.171986032471617,1.45134496933628,0.950161122120412,0.574808199372465,0.387956065953678,0,0,0.274083849293502,0,0,0.195551382734803,0.160317640503067,0,0.599428828746391,0.432271251462318,0.572682980829578,2.05913997434357,0.576219191952599,0.248505071130865,0.471388069233591,0.135904206073614,0.209205692624666,1.12198039399954,0.288950589901519,0,0,0,1.71906176567983,0,0,0,0,0,0,0,0,0,2.32991899054908,1.81201319306614,1.89556474276683,1.95470277177136,1.08270229666224,0,0,0,0.160753148465019,0,0,0,0,0,0.670869375198532,0,0,1.37280437475228,2.15144807199414,0.383830394638891,0,0,0,0,0,0,0,1.55975789423744,0.511164065356265,0.339936274560377,0,0,0,0,0.513260513652988,0,0,0,0,0,0,0.365377795142688,1.91502377331055,0,0,0,0,0.314108192500469,0,0,0,0,0,0.0620964029413835,0.553394539744923,0.74988244777264,0,0,0,1.87333962322753,0.28984205722165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.521745061811734,0,0,0,0,0,0,0.796191777397232,0,0,0,0,0.192619830407303,0,0.521988583930423,0,0,0,0.179088841081487,0.926404341482917,0,0,0,0.337884881306145,0,0.690860683462397,0,0,0,0,0,0.327609848846413,0,0.211312123358627,0,0,0,0,0,0.279759015438889,0,0.511577485214607,0.862598491173454,0,0,0.33946505990805,0,0,0.558644917973244,0,0.788617450012533,0,0,3.3687002508852,0,0,0,0,0,0,0,0,0.490738592505128,0.235939446695481,1.10057159113007,0.462102664601353,0,0,0.994581110581374,0,0,0,0.785720083444267,0.163771917510097,0.147856086217045,0,0,0,0,0,0.548257766857182,0.496211178389294,0,0.383287282918786,0,0,2.42786241694653,2.50428410486427,0.0887023701626388,0,0.342976018874837,0,0,1.41832609060762,0.222462803784138,0.078493092850514,0,1.68163297988273,1.82631744101899,0,0.9555033757741,0.357382720883282,1.73814972905999,0.116241425368125,0.695433089210318,1.60342272946051,1.45051314914126,0.17071847709395,0,1.29068207646083,0,0,0,0.22910686854405,0,0,0,0.196300467230486,0.121917924982269,0,0.410651227424988,1.1598144313382,0,0,0.198950775161368,0,0.11294608203896,1.64910775118144,0.150962843566674,0.0771741581079447,1.31135736302374,0.470317296361523,0.735444965261716,0.2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| ||
|short_description=p1@ENST00000432382,p1@uc003laj.1 | |short_description=p1@ENST00000432382,p1@uc003laj.1 | ||
}} | }} |
Latest revision as of 17:37, 24 September 2015
Short description: | p1@ENST00000432382, p1@uc003laj.1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000432382_5end, CAGE_peak_1_at_uc003laj.1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000432382, uc003laj.1_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 2.87e-09 | 4 |
epithelial cell of large intestine | 1.29e-08 | 2 |
hepatocyte | 2.34e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
rectum | 3.49e-15 | 4 |
subdivision of digestive tract | 1.56e-13 | 118 |
lower digestive tract | 3.73e-12 | 5 |
digestive system | 7.15e-12 | 145 |
digestive tract | 7.15e-12 | 145 |
primitive gut | 7.15e-12 | 145 |
intestine | 1.38e-11 | 17 |
large intestine | 2.90e-11 | 11 |
hindgut | 7.04e-11 | 19 |
endoderm-derived structure | 3.78e-10 | 160 |
endoderm | 3.78e-10 | 160 |
presumptive endoderm | 3.78e-10 | 160 |
gastrointestinal system | 1.37e-09 | 25 |
intestinal mucosa | 2.87e-09 | 4 |
wall of intestine | 2.87e-09 | 4 |
gastrointestinal system mucosa | 2.87e-09 | 4 |
gastrointestinal system epithelium | 2.87e-09 | 4 |
intestinal epithelium | 2.87e-09 | 4 |
pituitary gland | 8.26e-09 | 2 |
epithelium of mucosa | 1.61e-07 | 8 |
endo-epithelium | 1.97e-07 | 82 |
organ system subdivision | 9.41e-07 | 223 |
Ontology term | p-value | n |
---|---|---|
cancer | 1.08e-11 | 235 |
disease of cellular proliferation | 2.86e-11 | 239 |
carcinoma | 1.14e-09 | 106 |
organ system cancer | 4.68e-07 | 137 |
chronic leukemia | 5.74e-07 | 8 |
non-small cell lung carcinoma | 7.45e-07 | 5 |