FFCP PHASE1:Hg19::chr4:113066602..113066620,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr4:113066602..113066620,+
|short_description=p1@C4orf32
|description=CAGE_peak_1_at_C4orf32_5end
|association_with_transcript=49bp_to_ENST00000309733,NM_15240...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=132720 | |EntrezGene=132720 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26813 | |HGNC=26813 | ||
|TSSclassifier=strong | |||
|UniProt=Q8N8J7 | |UniProt=Q8N8J7 | ||
|association_with_transcript=49bp_to_ENST00000309733,NM_152400,uc003iah.2_5end | |||
|cluster_id=chr4:113066602..113066620,+ | |||
|description=CAGE_peak_1_at_C4orf32_5end | |||
|id=chr4:113066602..113066620,+ | |||
|ontology_enrichment_celltype=CL:0002139!4.82e-16!24;CL:0000115!3.86e-14!35;CL:0000860!4.02e-14!45;CL:0002057!9.56e-14!42;CL:0000071!2.24e-12!18;CL:0002546!2.24e-12!18;CL:0000557!6.67e-12!71;CL:0000839!2.13e-10!70;CL:0000763!3.88e-10!112;CL:0000049!3.88e-10!112;CL:0002009!1.43e-09!65;CL:0002194!8.16e-09!63;CL:0000576!8.16e-09!63;CL:0000040!8.16e-09!63;CL:0000559!8.16e-09!63;CL:0002031!9.49e-09!124;CL:0000037!1.28e-08!172;CL:0000566!1.28e-08!172;CL:0002032!1.54e-08!165;CL:0000837!1.54e-08!165;CL:0002078!2.69e-08!44;CL:0000988!2.90e-08!182;CL:0000766!6.99e-08!76;CL:1000413!7.50e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0002139;4.46e-16;24!CL:0000860;7.75e-13;33!CL:0002057;7.75e-13;33!CL:0000071;2.08e-12;18!CL:0000115;2.19e-12;36!CL:0000473;1.22e-07;39!CL:0000234;1.22e-07;39!CL:0000576;7.09e-07;48!CL:1000413;7.28e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002139,4.76e-16,24;CL:0000115,8.83e-15,36;CL:0000860,9.44e-14,42;CL:0002057,9.44e-14,42;CL:0000071,2.21e-12,18;CL:0002546,2.21e-12,18;CL:0000557,8.88e-12,67;CL:0000839,3.01e-10,66;CL:0000473,4.87e-10,48;CL:0000234,4.87e-10,48;CL:0000763,5.50e-10,108;CL:0000049,5.50e-10,108;CL:0002009,2.01e-09,61;CL:0002078,8.79e-09,45;CL:0002194,1.17e-08,59;CL:0000576,1.17e-08,59;CL:0000040,1.17e-08,59;CL:0000559,1.17e-08,59;CL:0002031,1.59e-08,120;CL:0000037,1.84e-08,168;CL:0002032,2.30e-08,161;CL:0000837,2.30e-08,161;CL:0000988,8.60e-08,177;CL:0000766,9.27e-08,72;CL:1000413,7.46e-07,9 | |||
|ontology_enrichment_development_v019=CL:0002546;2.08e-12;18!CL:0002057;2.15e-10;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003081!1.53e-13!216;UBERON:0002193!1.25e-12!112;UBERON:0001986!2.24e-12!18;UBERON:0004638!2.24e-12!18;UBERON:0004852!2.24e-12!18;UBERON:0002405!3.39e-12!115;UBERON:0002371!4.68e-10!80;UBERON:0000487!1.04e-09!22;UBERON:0002390!1.75e-09!102;UBERON:0003061!1.75e-09!102;UBERON:0001474!2.80e-09!86;UBERON:0000926!2.03e-08!448;UBERON:0004120!2.03e-08!448;UBERON:0006603!2.03e-08!448;UBERON:0000055!2.80e-08!69;UBERON:0001009!4.90e-08!113;UBERON:0004535!2.82e-07!110;UBERON:0006914!3.81e-07!25;UBERON:0003915!7.50e-07!9;UBERON:0004700!7.50e-07!9;UBERON:0001917!7.50e-07!9;UBERON:0002049!7.81e-07!79;UBERON:0007798!7.81e-07!79 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;2.08e-12;18!UBERON:0001986;2.08e-12;18!UBERON:0004852;2.08e-12;18!UBERON:0000487;1.11e-09;22!UBERON:0006914;5.28e-07;25!UBERON:0003915;7.28e-07;9!UBERON:0004700;7.28e-07;9!UBERON:0001917;7.28e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003081,5.14e-15,203;UBERON:0002405,1.83e-13,93;UBERON:0004638,2.21e-12,18;UBERON:0001986,2.21e-12,18;UBERON:0004852,2.21e-12,18;UBERON:0002193,2.25e-12,108;UBERON:0000926,4.91e-11,315;UBERON:0004120,4.91e-11,315;UBERON:0006603,4.91e-11,315;UBERON:0002371,7.12e-10,76;UBERON:0000487,1.03e-09,22;UBERON:0002390,3.14e-09,98;UBERON:0003061,3.14e-09,98;UBERON:0001474,4.52e-09,82;UBERON:0000055,1.69e-08,68;UBERON:0001009,3.46e-08,112;UBERON:0004535,2.04e-07,109;UBERON:0006914,4.02e-07,25;UBERON:0002049,5.30e-07,78;UBERON:0007798,5.30e-07,78;UBERON:0003915,7.46e-07,9;UBERON:0004700,7.46e-07,9;UBERON:0001917,7.46e-07,9;UBERON:0004765,9.52e-07,90 | |||
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| ||
|short_description=p1@C4orf32 | |||
}} | }} |
Latest revision as of 17:38, 24 September 2015
Short description: | p1@C4orf32 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_C4orf32_5end |
Coexpression cluster: | NA |
Association with transcript: | 49bp_to_ENST00000309733, NM_152400, uc003iah.2_5end |
EntrezGene: | C4orf32 |
HGNC: | 26813 |
UniProt: | Q8N8J7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 4.76e-16 | 24 |
endothelial cell | 8.83e-15 | 36 |
classical monocyte | 9.44e-14 | 42 |
CD14-positive, CD16-negative classical monocyte | 9.44e-14 | 42 |
blood vessel endothelial cell | 2.21e-12 | 18 |
embryonic blood vessel endothelial progenitor cell | 2.21e-12 | 18 |
granulocyte monocyte progenitor cell | 8.88e-12 | 67 |
myeloid lineage restricted progenitor cell | 3.01e-10 | 66 |
defensive cell | 4.87e-10 | 48 |
phagocyte | 4.87e-10 | 48 |
myeloid cell | 5.50e-10 | 108 |
common myeloid progenitor | 5.50e-10 | 108 |
macrophage dendritic cell progenitor | 2.01e-09 | 61 |
meso-epithelial cell | 8.79e-09 | 45 |
monopoietic cell | 1.17e-08 | 59 |
monocyte | 1.17e-08 | 59 |
monoblast | 1.17e-08 | 59 |
promonocyte | 1.17e-08 | 59 |
hematopoietic lineage restricted progenitor cell | 1.59e-08 | 120 |
hematopoietic stem cell | 1.84e-08 | 168 |
hematopoietic oligopotent progenitor cell | 2.30e-08 | 161 |
hematopoietic multipotent progenitor cell | 2.30e-08 | 161 |
hematopoietic cell | 8.60e-08 | 177 |
myeloid leukocyte | 9.27e-08 | 72 |
endothelial cell of artery | 7.46e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
lateral plate mesoderm | 5.14e-15 | 203 |
immune system | 1.83e-13 | 93 |
blood vessel endothelium | 2.21e-12 | 18 |
endothelium | 2.21e-12 | 18 |
cardiovascular system endothelium | 2.21e-12 | 18 |
hemolymphoid system | 2.25e-12 | 108 |
mesoderm | 4.91e-11 | 315 |
mesoderm-derived structure | 4.91e-11 | 315 |
presumptive mesoderm | 4.91e-11 | 315 |
bone marrow | 7.12e-10 | 76 |
simple squamous epithelium | 1.03e-09 | 22 |
hematopoietic system | 3.14e-09 | 98 |
blood island | 3.14e-09 | 98 |
bone element | 4.52e-09 | 82 |
vessel | 1.69e-08 | 68 |
circulatory system | 3.46e-08 | 112 |
cardiovascular system | 2.04e-07 | 109 |
squamous epithelium | 4.02e-07 | 25 |
vasculature | 5.30e-07 | 78 |
vascular system | 5.30e-07 | 78 |
endothelial tube | 7.46e-07 | 9 |
arterial system endothelium | 7.46e-07 | 9 |
endothelium of artery | 7.46e-07 | 9 |
skeletal element | 9.52e-07 | 90 |