FFCP PHASE1:Hg19::chr4:113218568..113218578,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=80216 | |EntrezGene=80216 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20917 | |HGNC=20917 | ||
|TSSclassifier=strong | |||
|UniProt=D6RDN6 | |UniProt=D6RDN6 | ||
|association_with_transcript=11bp_to_ENST00000515106_5end | |association_with_transcript=11bp_to_ENST00000515106_5end | ||
|cluster_id=chr4:113218568..113218578,+ | |||
|coexpression_cluster_id=C2 | |||
|description=CAGE_peak_2_at_ALPK1_5end | |description=CAGE_peak_2_at_ALPK1_5end | ||
|id=chr4:113218568..113218578,+ | |id=chr4:113218568..113218578,+ | ||
|ontology_enrichment_celltype=CL:0000766!1.38e-14!76;CL:0002194!1.26e-12!63;CL:0000576!1.26e-12!63;CL:0000040!1.26e-12!63;CL:0000559!1.26e-12!63;CL:0002009!1.06e-11!65;CL:0002057!1.53e-11!42;CL:0000839!1.24e-10!70;CL:0000557!3.02e-10!71;CL:0000860!6.77e-10!45;CL:0000763!1.67e-08!112;CL:0000049!1.67e-08!112;CL:0000738!5.54e-08!140;CL:0002087!9.20e-07!119 | |ontology_enrichment_celltype=CL:0000766!1.38e-14!76;CL:0002194!1.26e-12!63;CL:0000576!1.26e-12!63;CL:0000040!1.26e-12!63;CL:0000559!1.26e-12!63;CL:0002009!1.06e-11!65;CL:0002057!1.53e-11!42;CL:0000839!1.24e-10!70;CL:0000557!3.02e-10!71;CL:0000860!6.77e-10!45;CL:0000763!1.67e-08!112;CL:0000049!1.67e-08!112;CL:0000738!5.54e-08!140;CL:0002087!9.20e-07!119 | ||
|ontology_enrichment_celltype_v019=CL:0000576;3.14e-17;48!CL:0000860;7.05e-14;33!CL:0002057;7.05e-14;33!CL:0000473;8.98e-14;39!CL:0000234;8.98e-14;39!CL:0000775;1.50e-12;3!CL:0000766;1.96e-12;69!CL:0000081;2.83e-12;11!CL:0000094;3.46e-12;8!CL:0002619;9.61e-11;3!CL:0000771;6.43e-09;2!CL:0000763;1.05e-07;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,4.28e-31,72;CL:0002194,8.07e-25,59;CL:0000576,8.07e-25,59;CL:0000040,8.07e-25,59;CL:0000559,8.07e-25,59;CL:0002009,7.90e-24,61;CL:0000839,1.30e-21,66;CL:0000557,3.29e-21,67;CL:0000473,2.55e-19,48;CL:0000234,2.55e-19,48;CL:0000763,1.88e-18,108;CL:0000049,1.88e-18,108;CL:0000860,7.64e-18,42;CL:0002057,7.64e-18,42;CL:0000738,9.03e-16,136;CL:0000775,1.48e-12,3;CL:0000988,1.84e-12,177;CL:0002087,1.90e-12,115;CL:0000081,2.77e-12,11;CL:0002032,3.30e-12,161;CL:0000837,3.30e-12,161;CL:0000094,3.49e-12,8;CL:0002031,1.10e-11,120;CL:0000037,2.10e-11,168;CL:0002619,5.10e-11,3;CL:0000771,6.59e-09,2 | |||
|ontology_enrichment_development_v019=CL:0002057;2.77e-13;42!CL:0000049;2.83e-07;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!8.56e-17!102;UBERON:0003061!8.56e-17!102;UBERON:0002193!5.19e-15!112;UBERON:0007023!1.96e-11!115;UBERON:0001474!1.21e-09!86;UBERON:0002371!1.42e-09!80;UBERON:0000178!1.75e-09!15;UBERON:0000179!1.75e-09!15;UBERON:0000463!1.75e-09!15;UBERON:0004765!5.44e-08!101;UBERON:0001434!5.44e-08!101;UBERON:0002405!1.09e-07!115 | |ontology_enrichment_uberon=UBERON:0002390!8.56e-17!102;UBERON:0003061!8.56e-17!102;UBERON:0002193!5.19e-15!112;UBERON:0007023!1.96e-11!115;UBERON:0001474!1.21e-09!86;UBERON:0002371!1.42e-09!80;UBERON:0000178!1.75e-09!15;UBERON:0000179!1.75e-09!15;UBERON:0000463!1.75e-09!15;UBERON:0004765!5.44e-08!101;UBERON:0001434!5.44e-08!101;UBERON:0002405!1.09e-07!115 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;7.35e-23;15!UBERON:0000179;7.35e-23;15!UBERON:0000463;7.35e-23;15!UBERON:0002390;9.69e-11;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,7.11e-33,98;UBERON:0003061,7.11e-33,98;UBERON:0002193,3.71e-31,108;UBERON:0000178,8.78e-23,15;UBERON:0000179,8.78e-23,15;UBERON:0000463,8.78e-23,15;UBERON:0002371,7.49e-20,76;UBERON:0001474,5.56e-18,82;UBERON:0002405,9.16e-17,93;UBERON:0004765,7.08e-16,90;UBERON:0001434,1.01e-13,100;UBERON:0003081,1.40e-12,203;UBERON:0000926,4.95e-07,315;UBERON:0004120,4.95e-07,315;UBERON:0006603,4.95e-07,315;UBERON:0002204,9.12e-07,167 | |||
|phase1_expression=0.181678379270557,0.214100523890983,0.563817616383885,0,0.893922188854576,0,0,0,0,0.245733936501509,0,0,0,0.123766352960047,0,0,0,0,0,0,0,0,0,0,0,0.229240217243854,0,0.157421562627358,0,0.383829398097213,0.309632246632152,0,0,0.739508020333575,0.0774672005803016,0,0,0,1.20326668482085,0.434021741431704,1.11957737119962,1.94336199611388,1.80302897343931,0,0,0,0.232429036905685,0.411167888021826,0.309706370895104,4.60307827715441,3.58624989140741,4.7296445977717,0.689491361473237,0,1.35426486594342,0,0,0.674170453335254,0.918251677112708,0,0,1.9791078011203,2.59302754908121,1.70489900213078,0.870627715885752,0.56738522469114,0,1.7587406567972,4.17186334736161,3.47502151528187,0,0.736555271975129,1.58231193720442,1.26753171787165,1.70083439972035,0.628975936525128,1.01095768031846,0.901061357049038,1.44653028027372,0.855038231223746,0.99458338599545,0.91332076882317,0,0,0,0.426730222566507,0.400395987036012,0.574752439954483,0,0,0,0,0,0,0,0,0.196709770113833,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276350017785848,0,0.296573126324121,0.267540828089713,0,0.113309342697566,0,0,0.253019692019503,0,0,0,0.150575119077773,0.127986611154418,0,0.710331756132051,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0,0,0,0.196468613246569,0,0,0.324547393654683,1.0447784237956,0.398873881556595,0,0,0,0,0,0,0,0,0,0.208994966536811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.27121669744253,11.6334079244498,0,1.49091585508596,0.25326102332916,0.264818361626438,0.573673241497627,0.354668382198357,0,0,0,0.311211035399766,0,0,0.151357427644931,0.576175924479999,0.234321431833797,0,0,0.149448680551801,0,0,0,0,0,0,1.18800285728205,0.247266929278557,0,0,0,0.125118519871964,0,0,0,0.300476117813194,0,0,0,0,0,0.618315175430633,0,0.37223371266318,0,0,0.252433774244115,0.184099797284599,1.2931684545505,0,0.10075209822764,0,0.193260853163297,0,0.286804595389004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26755034821831,1.96565443335525,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0.144366447761074,0,0,0,0,1.23108503043699,0.234004265139238,0.743155811443641,0,0.335964256397719,0,0.268675568108545,0.290633938513962,0.383382679165211,0,0,0.207328115540772,0.144119953416961,0,0.063497894292169,0,0,0,0.205654985406647,0,0,0,0,0,0.129271715757778,0,0,0.26593811658487,0,0.257207374262142,0,0,0.285955987316295,0,0,0,0,0,0,0,0.099972991182057,0,1.00451418286425,0,0,0,0,0.144781306667579,0.205476322550383,0,0,0.197030760201927,0,0,0,0,0,0.167516265334349,0,6.74106321552464,5.9832291840805,21.5496066986738,0.12269149171914,0,0.271265023699736,0,0,0.315404830067869,0.117141414992713,0.300946099727719,0,0,0,0,0.260650843404249,0,0,0,0.431428401637234,0.213455115606889,0,0,0,0.248107807818777,0.460385919864187,0.280660094433074,0.256278298511402,0,0,0,0,0.177561725313127,0.328508624055237,0,0.116210378459959,0,0.40101294060657,0.184161977871793,0.459257792658427,0.364182336013434,0.786746489756545,0.451199612907412,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.412164046590889,0.0915694648183434,0.082509499920588,0,0.650060246036521,0,0.193341436584244,0,0.460511024178389,0,0.537101224341368,0.580066775656914,0.0852266274161009,0.267096106940212,0.165284915360978,0,0.255225424989168,0.4046311234222,0.464845549297286,0.31481234683064,0,0,0,0,0,0,0,0.316379424718726,0.571890581771475,0,0,0,0,0.539617372749944,0.274537029736055,0.235624804691373,0,0,0,0,0,0,0.818999468447914,0.848432591722276,0,0,0,0.438450885253763,0,0,0,0,0,0.286822704408103,0.196498082026242,0,0.354761064070598,0.422215270595328,0,0,0,0.0962221127255121,0,0,0,0,0,0,0.229723400206959,0.507447609232169,4.58782324285425,2.27858874869665,3.09701308095126,4.93634727703433,3.24236655596359,2.70015718619057,3.17250070517708,0,0,0.245040215981032,0.557409525377156,0,0,0,0,0.191505370132367,0.211673582723883,0.324621940274555,0.561594356226918,0,0,0,0.169291777801603,0,0,0,0.687010689511529,0.307240764308458,0.447352215784832,1.00109485027145,0.19538809540204,0,0,0,0.33307196799782,0,0,0.73254089635947,0,3.23185814404687,0,0,0,0.307160702099232,0,0.562677665642051,0.445234820091624,0.824019371133798,0,0,0.552567831062295,0,0.102268682502155,0.246169610922139,0,0.0898683511473268,0,0,0.986434056369336,2.3948309234694,0,0,0.278304294485554,0,0.260427761085233,0,0,0.341380344856499,0.254253650292766,0,0,0,0.173624994933292,0.885741385813839,0.361789315876224,1.52581736317083,0.110579259931225,0,0,0.21787692703798,0.139423744278603,0.153900517007594,0,0,0,0,0.31900115973192,0.183195186803725,0,0,0,0,0,0,0,0,0,0,0.326465616318295,0.141353071433941,0.216388639742091,0,0.176915129006678,0,3.26173241548684,1.23563938946503,0.730953646538188,0.269604531922708,0,0,0,0.391329237864179,0,0.394584402849391,0,0,1.39010475182674,0,0,0,0.330991955875499,0,0,0,0.416024019039416,0,0.293977192243133,0.261177619741208,0.17472666824203,0,0,0,0,0.290967049465258,0.882561266915003,0.225980740780532,0,0,0.126621591911757,0,0.240476460754601,0,0,0.144090417154106,0,0,0,0.49701014226173,0,0,0.313808538937,0.407992870545287,0,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| ||
|short_description=p2@ALPK1 | |short_description=p2@ALPK1 | ||
}} | }} |
Latest revision as of 17:56, 24 September 2015
Short description: | p2@ALPK1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_ALPK1_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | 11bp_to_ENST00000515106_5end |
EntrezGene: | ALPK1 |
HGNC: | 20917 |
UniProt: | D6RDN6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 4.28e-31 | 72 |
monopoietic cell | 8.07e-25 | 59 |
monocyte | 8.07e-25 | 59 |
monoblast | 8.07e-25 | 59 |
promonocyte | 8.07e-25 | 59 |
macrophage dendritic cell progenitor | 7.90e-24 | 61 |
myeloid lineage restricted progenitor cell | 1.30e-21 | 66 |
granulocyte monocyte progenitor cell | 3.29e-21 | 67 |
defensive cell | 2.55e-19 | 48 |
phagocyte | 2.55e-19 | 48 |
myeloid cell | 1.88e-18 | 108 |
common myeloid progenitor | 1.88e-18 | 108 |
classical monocyte | 7.64e-18 | 42 |
CD14-positive, CD16-negative classical monocyte | 7.64e-18 | 42 |
leukocyte | 9.03e-16 | 136 |
neutrophil | 1.48e-12 | 3 |
hematopoietic cell | 1.84e-12 | 177 |
nongranular leukocyte | 1.90e-12 | 115 |
blood cell | 2.77e-12 | 11 |
hematopoietic oligopotent progenitor cell | 3.30e-12 | 161 |
hematopoietic multipotent progenitor cell | 3.30e-12 | 161 |
granulocyte | 3.49e-12 | 8 |
hematopoietic lineage restricted progenitor cell | 1.10e-11 | 120 |
hematopoietic stem cell | 2.10e-11 | 168 |
adult endothelial progenitor cell | 5.10e-11 | 3 |
eosinophil | 6.59e-09 | 2 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 7.11e-33 | 98 |
blood island | 7.11e-33 | 98 |
hemolymphoid system | 3.71e-31 | 108 |
blood | 8.78e-23 | 15 |
haemolymphatic fluid | 8.78e-23 | 15 |
organism substance | 8.78e-23 | 15 |
bone marrow | 7.49e-20 | 76 |
bone element | 5.56e-18 | 82 |
immune system | 9.16e-17 | 93 |
skeletal element | 7.08e-16 | 90 |
skeletal system | 1.01e-13 | 100 |
lateral plate mesoderm | 1.40e-12 | 203 |
mesoderm | 4.95e-07 | 315 |
mesoderm-derived structure | 4.95e-07 | 315 |
presumptive mesoderm | 4.95e-07 | 315 |
musculoskeletal system | 9.12e-07 | 167 |