FFCP PHASE1:Hg19::chr11:82996996..82997007,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr11:82996996..82997007,-
|short_description=p5@CCDC90B
|description=CAGE_peak_5_at_CCDC90B_5end
|association_with_transcript=0bp_to_ENST00000530253_5end
|Ent...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=60492 | |EntrezGene=60492 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28108 | |HGNC=28108 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000530253_5end | |||
|cluster_id=chr11:82996996..82997007,- | |||
|description=CAGE_peak_5_at_CCDC90B_5end | |||
|id=chr11:82996996..82997007,- | |||
|ontology_enrichment_celltype=CL:0000055!8.55e-10!180 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!7.26e-11!94;UBERON:0001016!7.26e-11!94;UBERON:0001017!7.92e-11!82;UBERON:0005743!1.61e-10!86;UBERON:0000924!1.20e-09!173;UBERON:0006601!1.20e-09!173;UBERON:0004121!7.59e-09!169;UBERON:0000955!5.17e-07!69;UBERON:0006238!5.17e-07!69;UBERON:0000033!6.03e-07!123 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,1.19e-12,89;UBERON:0001017,4.48e-12,81;UBERON:0004121,8.93e-12,171;UBERON:0000924,8.93e-12,171;UBERON:0006601,8.93e-12,171;UBERON:0000955,7.89e-08,68;UBERON:0006238,7.89e-08,68;UBERON:0002346,8.33e-08,86;UBERON:0010371,2.24e-07,104;UBERON:0001049,2.37e-07,56;UBERON:0005068,2.37e-07,56;UBERON:0006241,2.37e-07,56;UBERON:0007135,2.37e-07,56;UBERON:0003075,7.24e-07,82;UBERON:0007284,7.24e-07,82 | |||
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| ||
|short_description=p5@CCDC90B | |||
}} | }} |
Latest revision as of 18:57, 24 September 2015
Short description: | p5@CCDC90B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_CCDC90B_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000530253_5end |
EntrezGene: | CCDC90B |
HGNC: | 28108 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
nervous system | 1.19e-12 | 89 |
central nervous system | 4.48e-12 | 81 |
ectoderm-derived structure | 8.93e-12 | 171 |
ectoderm | 8.93e-12 | 171 |
presumptive ectoderm | 8.93e-12 | 171 |
brain | 7.89e-08 | 68 |
future brain | 7.89e-08 | 68 |
neurectoderm | 8.33e-08 | 86 |
ecto-epithelium | 2.24e-07 | 104 |
neural tube | 2.37e-07 | 56 |
neural rod | 2.37e-07 | 56 |
future spinal cord | 2.37e-07 | 56 |
neural keel | 2.37e-07 | 56 |
neural plate | 7.24e-07 | 82 |
presumptive neural plate | 7.24e-07 | 82 |