FFCP PHASE1:Hg19::chr20:22559211..22559227,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=140828 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=16189 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=52bp_to_ENST00000450346,NR_001558,uc010zsp.1_5end | |||
|cluster_id=chr20:22559211..22559227,- | |||
|description=CAGE_peak_1_at_LINC00261_5end | |||
|id=chr20:22559211..22559227,- | |||
|ontology_enrichment_celltype=CL:0000181!2.92e-13!12;CL:0000417!2.92e-13!12;CL:0000668!2.92e-13!12;CL:0000414!2.92e-13!12;CL:0000412!2.92e-13!12;CL:0000182!2.92e-13!12;CL:0000223!6.73e-10!59;CL:0002322!1.73e-09!5 | |||
|ontology_enrichment_celltype_v019=CL:0000182;4.26e-17;12!CL:0002322;8.05e-10;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,4.26e-17,12;CL:0002322,8.35e-10,5;CL:0000223,1.77e-07,58 | |||
|ontology_enrichment_development_v019=UBERON:0009497;2.84e-19;13!UBERON:0004161;1.36e-18;11!UBERON:0001041;7.37e-13;30!UBERON:0006595;2.22e-07;86!UBERON:0003104;7.99e-07;31 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004119!3.89e-19!169;UBERON:0000925!3.89e-19!169;UBERON:0006595!3.89e-19!169;UBERON:0001007!5.85e-18!155;UBERON:0001555!5.85e-18!155;UBERON:0007026!5.85e-18!155;UBERON:0004921!7.90e-18!129;UBERON:0004185!7.90e-18!129;UBERON:0009497!1.97e-15!25;UBERON:0000015!1.97e-15!25;UBERON:0002423!1.97e-15!25;UBERON:0006235!1.97e-15!25;UBERON:0004161!1.97e-15!25;UBERON:0009854!6.30e-15!23;UBERON:0009856!1.23e-14!26;UBERON:0003929!2.14e-14!54;UBERON:0005911!3.69e-14!82;UBERON:0002107!7.23e-14!19;UBERON:0006925!7.23e-14!19;UBERON:0008836!7.23e-14!19;UBERON:0008835!1.44e-13!22;UBERON:0003894!1.44e-13!22;UBERON:0000077!2.00e-13!130;UBERON:0007499!2.46e-13!25;UBERON:0005057!2.30e-12!26;UBERON:0000466!1.25e-10!126;UBERON:0001041!1.65e-10!98;UBERON:0002365!1.69e-08!31;UBERON:0002330!1.69e-08!31;UBERON:0002368!3.87e-08!35;UBERON:0005177!1.69e-07!107;UBERON:0005409!1.71e-07!35;UBERON:0002530!3.60e-07!59 | |||
|ontology_enrichment_uberon_v019=UBERON:0002423;1.46e-19;25!UBERON:0002107;2.80e-19;19!UBERON:0006925;2.80e-19;19!UBERON:0000160;4.71e-15;17!UBERON:0005409;5.86e-14;22!UBERON:0002365;1.17e-10;31!UBERON:0002330;1.17e-10;31!UBERON:0004921;9.99e-10;33!UBERON:0000059;2.10e-09;11!UBERON:0002368;2.46e-09;33!UBERON:0001007;1.32e-08;81!UBERON:0001155;3.21e-08;9!UBERON:0000949;6.32e-07;43 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0009854,2.28e-21,23;UBERON:0004921,5.16e-20,118;UBERON:0009497,1.43e-19,25;UBERON:0000015,1.43e-19,25;UBERON:0002423,1.43e-19,25;UBERON:0006235,1.43e-19,25;UBERON:0004161,1.43e-19,25;UBERON:0002107,2.87e-19,19;UBERON:0006925,2.87e-19,19;UBERON:0008836,2.87e-19,19;UBERON:0008835,2.93e-19,22;UBERON:0003894,2.93e-19,22;UBERON:0009856,1.58e-18,26;UBERON:0004119,4.90e-17,160;UBERON:0000925,4.90e-17,160;UBERON:0006595,4.90e-17,160;UBERON:0007499,1.35e-16,25;UBERON:0001007,5.71e-16,145;UBERON:0001555,5.71e-16,145;UBERON:0007026,5.71e-16,145;UBERON:0000160,4.60e-15,17;UBERON:0003929,5.29e-13,54;UBERON:0005911,5.80e-13,82;UBERON:0005409,4.41e-12,25;UBERON:0002365,8.11e-11,31;UBERON:0002330,8.11e-11,31;UBERON:0001041,1.17e-10,87;UBERON:0011216,1.67e-09,223;UBERON:0000059,2.03e-09,11;UBERON:0002368,2.67e-09,35;UBERON:0005177,1.50e-08,101;UBERON:0001155,3.06e-08,9;UBERON:0000949,4.42e-08,45;UBERON:0005172,2.06e-07,54;UBERON:0005173,2.06e-07,54 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.982935746006035,4.88460817580699,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10926203050036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21079900526674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0,0,0,3.20898734969396,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168336113954066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.545492241181669,0,0.121973706129595,1.32529768321485,9.41170937243099,5.18305275076852,7.82194637714448,7.66452454059243,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.2925920906512,0,295.339231134866,202.462406635591,193.188299484819,0,1.35287282397425,0,0,0,0,0.277765335475589,0,0,0,0,0,0,0,0,0,0,0,0,0,0.93733833986777,0,0,0,0,0,0,0,0,0,0,0,0,0,3.4214489204541,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.362578348774867,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,78.3111688522689,0,0,0,0,0,0,0,0,0,0,0,0,0,1.4875642382488,4.03599141466723,0.638063562472921,31.8647009694982,0,0,0,0.308033580176089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272999822815972,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354761064070598,0,0,0,0,0.0962221127255121,0,0,81.6226752734675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,108.729585185917,0.796991953004279,3.59169090190492,66.7621781813831,0,0,0,3.6846023970404,0,0,0,0,0,6.78532922266653,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.54041861227339,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.83758992864123,0,26.8720721391196,7.34197785377715,17.1088440581415,0,0,0,0.202203398942031,0,0,0,0,0,0,128.250159011584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.387956065953678,0,0,0,0,0,0,0.400794101257669,58.4861205585826,0,0,0,908.42391868124,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.599037001496973,0.429226048136571,0,0,0,516.07705640662,148.348732284502,123.953451005274,146.198286619727,79.0372676563433,0,0,0,1.60753148465019,0,0,0,0,0.0607495566580247,0,0,0.104909176269996,0,0,0,0,0,0,0,0,0,0,0,0,0,269.363005500316,176.234162253254,0,0,0.855434189421647,0,4.48507132784318,1.88645166119599,9.94173732833269,0,0,0,0,0,0,0,0,67.5332613876007,0,0,0,0,0,0.124192805882767,0,55.3663207272132,0,0,7.99903786973784,0,0,0,0.233713309847224,0,0,0,0,0,0,0,0,0.159296767163702,0,0,0,0,0,0,0,0,0,0.214821114084977,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,17.7502183621247,0,0,0,0,0.552317850755522,0.839277046316667,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,114.101045640032,0,0,0,0.0675375846183947,0,0,0,0,0,4.96211178389294,0,0,0,0,0,0,0,0,0.171488009437418,0.135939465953663,0,0,130.696897223181,1.0989032999072,0,0,9.13158720509496,0,0,0,0,0,0,0.801711364730253,0,0,0,0.430227358820278,0,0,0,0,0,0,0,0.196300467230486,0,0,0,0,0,379.683749198997,0,0,47.889138784519,0,0,12.2706911391632,15.9548479167889,195.651995286394,0,297.18812589515,0,0,0,0,0,0.580120991762195,0,0,0,0,162.134678190727,0,0.286679166302903,0,0,0,95.2248312927721,0,0,0,0,0,3.67425652933167,0,0.801652215796681,0.0918948995348449,0,0,0.267964130156178,0,0,0.639701945702943,0.476128862927481,0,0.0620747142958579,0,0.0636471582781649,0,0,0,1.68380132536469,1.14755528628282,2.66128285236811,0,0,0,0,0,1.4668973301944,0.406896178315738,0,0,0 | |||
|short_description=p1@LINC00261 | |||
}} |
Latest revision as of 18:57, 24 September 2015
Short description: | p1@LINC00261 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_LINC00261_5end |
Coexpression cluster: | NA |
Association with transcript: | 52bp_to_ENST00000450346, NR_001558, uc010zsp.1_5end |
EntrezGene: | LINC00261 |
HGNC: | 16189 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 4.26e-17 | 12 |
embryonic stem cell | 8.35e-10 | 5 |
endodermal cell | 1.77e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
digestive tract diverticulum | 2.28e-21 | 23 |
subdivision of digestive tract | 5.16e-20 | 118 |
epithelium of foregut-midgut junction | 1.43e-19 | 25 |
anatomical boundary | 1.43e-19 | 25 |
hepatobiliary system | 1.43e-19 | 25 |
foregut-midgut junction | 1.43e-19 | 25 |
septum transversum | 1.43e-19 | 25 |
liver | 2.87e-19 | 19 |
digestive gland | 2.87e-19 | 19 |
liver bud | 2.87e-19 | 19 |
hepatic diverticulum | 2.93e-19 | 22 |
liver primordium | 2.93e-19 | 22 |
sac | 1.58e-18 | 26 |
endoderm-derived structure | 4.90e-17 | 160 |
endoderm | 4.90e-17 | 160 |
presumptive endoderm | 4.90e-17 | 160 |
epithelial sac | 1.35e-16 | 25 |
digestive system | 5.71e-16 | 145 |
digestive tract | 5.71e-16 | 145 |
primitive gut | 5.71e-16 | 145 |
intestine | 4.60e-15 | 17 |
gut epithelium | 5.29e-13 | 54 |
endo-epithelium | 5.80e-13 | 82 |
gastrointestinal system | 4.41e-12 | 25 |
exocrine gland | 8.11e-11 | 31 |
exocrine system | 8.11e-11 | 31 |
foregut | 1.17e-10 | 87 |
organ system subdivision | 1.67e-09 | 223 |
large intestine | 2.03e-09 | 11 |
endocrine gland | 2.67e-09 | 35 |
trunk region element | 1.50e-08 | 101 |
colon | 3.06e-08 | 9 |
endocrine system | 4.42e-08 | 45 |
abdomen element | 2.06e-07 | 54 |
abdominal segment element | 2.06e-07 | 54 |