FFCP PHASE1:Hg19::chr6:13328078..13328102,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=51256 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21066 | |||
|TSSclassifier=strong | |||
|UniProt=Q5SZL3 | |||
|association_with_transcript=-28bp_to_ENST00000420456_5end | |||
|cluster_id=chr6:13328078..13328102,- | |||
|description=CAGE_peak_2_at_TBC1D7_5end | |||
|id=chr6:13328078..13328102,- | |||
|ontology_enrichment_celltype=CL:0002057!1.44e-45!42;CL:0000860!1.46e-45!45;CL:0000766!4.15e-32!76;CL:0002194!4.66e-30!63;CL:0000576!4.66e-30!63;CL:0000040!4.66e-30!63;CL:0000559!4.66e-30!63;CL:0002009!1.20e-28!65;CL:0000839!1.25e-26!70;CL:0000763!1.58e-26!112;CL:0000049!1.58e-26!112;CL:0000557!4.96e-26!71;CL:0000037!5.14e-18!172;CL:0000566!5.14e-18!172;CL:0000738!1.13e-17!140;CL:0002032!4.05e-17!165;CL:0000837!4.05e-17!165;CL:0000988!1.65e-16!182;CL:0002087!2.34e-16!119;CL:0002031!3.75e-13!124;CL:0002393!9.22e-08!9;CL:0002397!9.22e-08!9 | |||
|ontology_enrichment_celltype_v019=CL:0000860;4.40e-88;33!CL:0002057;4.40e-88;33!CL:0000473;1.94e-58;39!CL:0000234;1.94e-58;39!CL:0000576;3.25e-46;48!CL:0000766;8.19e-25;69!CL:0000148;1.17e-19;10!CL:0000763;3.41e-16;100!CL:0000147;9.18e-14;14!CL:0002567;3.45e-13;3!CL:0002087;2.64e-11;104!CL:0000710;2.43e-09;20!CL:0000771;4.17e-09;2!CL:0000738;2.48e-08;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,6.63e-84,42;CL:0002057,6.63e-84,42;CL:0000473,1.65e-72,48;CL:0000234,1.65e-72,48;CL:0002194,1.50e-56,59;CL:0000576,1.50e-56,59;CL:0000040,1.50e-56,59;CL:0000559,1.50e-56,59;CL:0000766,2.56e-55,72;CL:0002009,1.72e-54,61;CL:0000839,7.00e-50,66;CL:0000557,4.85e-49,67;CL:0000763,2.99e-39,108;CL:0000049,2.99e-39,108;CL:0002087,1.14e-27,115;CL:0000738,1.23e-27,136;CL:0002031,2.21e-24,120;CL:0000037,5.64e-24,168;CL:0002032,9.25e-24,161;CL:0000837,9.25e-24,161;CL:0000988,2.40e-22,177;CL:0000148,1.16e-19,10;CL:0000541,1.16e-19,10;CL:0000147,9.10e-14,14;CL:0002567,3.24e-13,3;CL:0000219,1.33e-12,386;CL:0000710,2.42e-09,20;CL:0000771,4.00e-09,2;CL:0000134,1.48e-08,354;CL:0002320,3.13e-08,361 | |||
|ontology_enrichment_development_v019=CL:0002057;3.66e-62;42!CL:0000049;8.42e-12;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:1909;5.12e-09;2 | |||
|ontology_enrichment_disease_v019_2=DOID:1909,4.53e-09,2 | |||
|ontology_enrichment_uberon=UBERON:0001474!1.81e-22!86;UBERON:0002371!2.37e-21!80;UBERON:0002390!1.22e-18!102;UBERON:0003061!1.22e-18!102;UBERON:0004765!8.89e-18!101;UBERON:0001434!8.89e-18!101;UBERON:0002193!2.67e-16!112;UBERON:0002405!4.33e-15!115 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.86e-42,76;UBERON:0001474,1.08e-41,82;UBERON:0004765,2.26e-37,90;UBERON:0002390,1.08e-33,98;UBERON:0003061,1.08e-33,98;UBERON:0002405,1.83e-33,93;UBERON:0001434,6.19e-33,100;UBERON:0002193,6.38e-30,108;UBERON:0002204,7.40e-17,167;UBERON:0003081,1.39e-12,203;UBERON:0002384,8.70e-08,371 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393364276848904,1.15148819429164,0.154816123316076,0,0,0.739508020333575,0,0,0,1.10799081706375,0.601633342410425,0.868043482863407,0,0,0,2.18097358169347,7.55751887377619,1.21292030593908,4.88100977501938,18.913722849004,26.944454267874,4.89077066947656,7.17249978281482,10.1687358852092,3.10271112662957,23.2374486090177,12.1883837934908,4.51781614902251,30.8383949565366,24.4948598045142,4.28517449319264,21.5022448140983,14.0654167675789,0.659702600373432,2.19410023383795,0.426224750532694,4.06292934080018,12.4824749432051,8.71951148593805,5.52747063564835,9.90817544998383,14.1172749058326,3.02699751316684,13.9945501675275,15.8231193720442,1.05627643155971,0.212604299965044,0.209658645508376,0.336985893439485,0,0.32145117339416,0,0.19891667719909,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0.382273228125229,0,1.12101712596307,0,0,0,0,0,0,0.473447805734733,0,0,0,0,0,0,0,0,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255725123687061,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0.174129737299267,0,0,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0.367663080345869,0,0.0892997282840798,0,0,0,0,0,1.31780417436063,7.75560528296651,0,0,0,0,0.286836620748814,0.354668382198357,0,0,0,0,0,0.490385709340376,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118306800039844,0.168584690078102,0,0,0,0.237270619111097,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0.245976877086227,0,0,0,0,0,0,0,0,0,0,0.144366447761074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.088048434013226,0,0,0,6.66727890067775,8.02175693672383,10.5495702489042,1.71072446022705,6.06682206949609,3.00343057843917,8.57479297891735,0,0,0.07333828582095,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0,0,0,0,0,0,0,0,0.205476322550383,0,0,0.197030760201927,0,0.128343036279748,0,0,0,0,0,0,0,0.414415513436035,0.12269149171914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.620304078368662,1.07857100409308,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241718899183244,0,0,0,0,0,0,0,0,0,0,0,0.170093705276516,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0.457847324091717,0.577566499444116,0,0,0,0,0,0,0,0,0,0,0,0.165284915360978,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179872457583315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0.371606350251437,0.144269212976445,0.0711418433484141,0,0,0.191505370132367,1.90506224451495,0.324621940274555,0,0,0,0,0.169291777801603,0,0.201799707191048,0,0,0,0,0,0,0,0,1.6227340708559,0,0,0,0,0,0.111443384277478,0,0,0,0,0,0.140669416410513,0,0,0,0,0,0,0,0,0,0,0.179021174675609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.21787692703798,0,0,0,0,0.179515288819544,0.217294743844016,0,0,0,0,0,0,0.225595660617181,0.392125068635479,0.335643173951685,0,0,0,0,0.706765357169704,0.216388639742091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138674673013139,0,0,0,0,0,0.19351266257817,0.146178634172371,0,0,1.85337866052151,0,0,0.19871461170299,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0984274815147488,0.254019996197353,0,0,0,0.137539436597234,0,0,0,0.0607495566580247,0,0.157611414598396,0.209818352539992,0,0,0.191915197319445,0,0,0.25426853765475,0,0,0,0,0.328370082997356,0,0.113312091520126,0,0,0,0,0.513260513652988,0,0,0.157204305099666,0,0,0.197611631897944,0,0,0,0,0,0,0,0,0.122026264901963,0,0,0.110929051536852,0.0620964029413835,0.138348634936231,0,5.61101734904097,1.7127920012698,0,0,0.144921028610825,0,0,0,0,0,0,0,0.151230923763239,0,0,0.159296767163702,0,0,0,0,0,0,0,0,0.363697318405119,0.107410557042488,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308801447160972,0,0,0,0,1.79369063011563,0,0,0,0,0,0,0,0.737318726261158,0.211312123358627,0,0.106691729694141,0,0,0,0,0,0,0.323474434190045,0.314531883711793,0.436838552768056,0.169732529954025,0,0,0,0.318004350653419,5.83576913009275,0,0,0,0,0,0.159633859057151,0.205116364240755,0.252071696221718,0,0,0,0.0981477185010256,0,0,0.115525666150338,0,0,0,0,0,0,0,0,0.147856086217045,0.0675375846183947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171488009437418,0.0679697329768317,0,0,0,0,0.314231179832004,0,0,0,0.47775168788705,0.571812353413251,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.098150233615243,0,0,0,0,0,0,0.198950775161368,0,0.11294608203896,0,0.452888530700021,0,0,0,0,0,0,0.297046400327086,0,0,0,0.0644578879735772,0.0999411559249289,0,0,0.160482733378337,0,0,0,0.473314686579554,0,0.436350690340377,0,0,0,0,0,0.109265571963696,0.126698501011437,0,0,0,0.250707539292375,0,0,0,0,0,0,0.0645889098360061,0.186224142887574,0,0,0,0,0,0,0,0,0.162806537221949,0,0,0,0,0.244482888365733,0,0,0,0 | |||
|short_description=p2@TBC1D7 | |||
}} |
Latest revision as of 20:32, 24 September 2015
Short description: | p2@TBC1D7 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_TBC1D7_5end |
Coexpression cluster: | NA |
Association with transcript: | -28bp_to_ENST00000420456_5end |
EntrezGene: | TBC1D7 |
HGNC: | 21066 |
UniProt: | Q5SZL3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 6.63e-84 | 42 |
CD14-positive, CD16-negative classical monocyte | 6.63e-84 | 42 |
defensive cell | 1.65e-72 | 48 |
phagocyte | 1.65e-72 | 48 |
monopoietic cell | 1.50e-56 | 59 |
monocyte | 1.50e-56 | 59 |
monoblast | 1.50e-56 | 59 |
promonocyte | 1.50e-56 | 59 |
myeloid leukocyte | 2.56e-55 | 72 |
macrophage dendritic cell progenitor | 1.72e-54 | 61 |
myeloid lineage restricted progenitor cell | 7.00e-50 | 66 |
granulocyte monocyte progenitor cell | 4.85e-49 | 67 |
myeloid cell | 2.99e-39 | 108 |
common myeloid progenitor | 2.99e-39 | 108 |
nongranular leukocyte | 1.14e-27 | 115 |
leukocyte | 1.23e-27 | 136 |
hematopoietic lineage restricted progenitor cell | 2.21e-24 | 120 |
hematopoietic stem cell | 5.64e-24 | 168 |
hematopoietic oligopotent progenitor cell | 9.25e-24 | 161 |
hematopoietic multipotent progenitor cell | 9.25e-24 | 161 |
hematopoietic cell | 2.40e-22 | 177 |
melanocyte | 1.16e-19 | 10 |
melanoblast | 1.16e-19 | 10 |
pigment cell | 9.10e-14 | 14 |
light melanocyte | 3.24e-13 | 3 |
motile cell | 1.33e-12 | 386 |
neurecto-epithelial cell | 2.42e-09 | 20 |
eosinophil | 4.00e-09 | 2 |
mesenchymal cell | 1.48e-08 | 354 |
connective tissue cell | 3.13e-08 | 361 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.86e-42 | 76 |
bone element | 1.08e-41 | 82 |
skeletal element | 2.26e-37 | 90 |
hematopoietic system | 1.08e-33 | 98 |
blood island | 1.08e-33 | 98 |
immune system | 1.83e-33 | 93 |
skeletal system | 6.19e-33 | 100 |
hemolymphoid system | 6.38e-30 | 108 |
musculoskeletal system | 7.40e-17 | 167 |
lateral plate mesoderm | 1.39e-12 | 203 |
connective tissue | 8.70e-08 | 371 |
Ontology term | p-value | n |
---|---|---|
melanoma | 4.53e-09 | 2 |