FFCP PHASE1:Hg19::chr17:42466993..42467000,-: Difference between revisions
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|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=3674 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=6138 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=P08514 | ||
|association_with_transcript=-120bp_to_ENST00000262407,ENST00000353281,NM_000419,uc002igt.1_5end | |association_with_transcript=-120bp_to_ENST00000262407,ENST00000353281,NM_000419,uc002igt.1_5end | ||
|cluster_id=chr17:42466993..42467000,- | |cluster_id=chr17:42466993..42467000,- | ||
Latest revision as of 21:31, 24 September 2015
| Short description: | p7@ITGA2B |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_7_at_ITGA2B_5end |
| Coexpression cluster: | C64_Mast_chronic_acute_immature_chorionic_Basophils_Dendritic |
| Association with transcript: | -120bp_to_ENST00000262407, ENST00000353281, NM_000419, uc002igt.1_5end |
| EntrezGene: | ITGA2B |
| HGNC: | 6138 |
| UniProt: | P08514 |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p7@ITGA2B |
|---|
0.0
2.5
5.0
7.5
10.0
12.5
15.0
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| myeloid cell | 1.51e-17 | 108 |
| common myeloid progenitor | 1.51e-17 | 108 |
| hematopoietic oligopotent progenitor cell | 1.47e-13 | 161 |
| hematopoietic multipotent progenitor cell | 1.47e-13 | 161 |
| hematopoietic stem cell | 6.11e-13 | 168 |
| mast cell | 1.26e-12 | 5 |
| basophil mast progenitor cell | 1.26e-12 | 5 |
| hematopoietic cell | 3.22e-12 | 177 |
| endocrine cell | 2.08e-07 | 9 |
Showing 1 to 9 of 9 entries
| Ontology term | p-value | n |
|---|---|---|
| myeloid leukemia | 2.05e-44 | 31 |
| leukemia | 1.19e-42 | 39 |
| hematologic cancer | 2.14e-32 | 51 |
| immune system cancer | 2.14e-32 | 51 |
| chronic myeloid leukemia | 9.99e-16 | 1 |
| acute myeloid leukemia | 1.34e-15 | 1 |
| organ system cancer | 2.80e-11 | 137 |
| chronic leukemia | 4.34e-08 | 8 |
Showing 1 to 8 of 8 entries
