FFCP PHASE1:Hg19::chr11:8704552..8704571,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6157 | |EntrezGene=6157 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10329 | |HGNC=10329 | ||
|TSSclassifier=strong | |||
|UniProt=E9PJD9 | |UniProt=E9PJD9 | ||
|association_with_transcript=-176bp_to_ENST00000526562_5end | |association_with_transcript=-176bp_to_ENST00000526562_5end | ||
|cluster_id=chr11:8704552..8704571,+ | |||
|description=CAGE_peak_2_at_RPL27A_5end | |description=CAGE_peak_2_at_RPL27A_5end | ||
|id=chr11:8704552..8704571,+ | |id=chr11:8704552..8704571,+ | ||
|ontology_enrichment_celltype=CL:0000548!6.58e-23!679;CL:0000004!6.58e-23!679;CL:0000255!6.58e-23!679;CL:0000012!2.34e-22!682;CL:0000220!2.16e-19!246;CL:0002321!3.47e-19!248;CL:0000055!4.09e-17!180;CL:0000144!2.41e-15!625;CL:0002371!8.99e-14!591;CL:0000222!1.30e-12!119;CL:0000680!1.61e-11!57;CL:0000056!1.61e-11!57;CL:0000355!1.61e-11!57;CL:0000003!4.04e-11!722;CL:0000187!1.35e-10!54;CL:0000393!1.99e-10!60;CL:0000211!1.99e-10!60;CL:0000066!2.78e-10!254;CL:0000183!4.55e-10!59;CL:0000192!6.40e-08!42;CL:0000514!6.40e-08!42;CL:0000359!2.86e-07!32;CL:0000063!4.15e-07!578 | |ontology_enrichment_celltype=CL:0000548!6.58e-23!679;CL:0000004!6.58e-23!679;CL:0000255!6.58e-23!679;CL:0000012!2.34e-22!682;CL:0000220!2.16e-19!246;CL:0002321!3.47e-19!248;CL:0000055!4.09e-17!180;CL:0000144!2.41e-15!625;CL:0002371!8.99e-14!591;CL:0000222!1.30e-12!119;CL:0000680!1.61e-11!57;CL:0000056!1.61e-11!57;CL:0000355!1.61e-11!57;CL:0000003!4.04e-11!722;CL:0000187!1.35e-10!54;CL:0000393!1.99e-10!60;CL:0000211!1.99e-10!60;CL:0000066!2.78e-10!254;CL:0000183!4.55e-10!59;CL:0000192!6.40e-08!42;CL:0000514!6.40e-08!42;CL:0000359!2.86e-07!32;CL:0000063!4.15e-07!578 | ||
|ontology_enrichment_celltype_v019=CL:0000359;3.81e-08;32 | |||
|ontology_enrichment_celltype_v019_2=CL:0000680,4.21e-12,58;CL:0000056,4.21e-12,58;CL:0000355,4.21e-12,58;CL:0000222,2.66e-11,121;CL:0002321,3.78e-11,250;CL:0000187,6.53e-11,55;CL:0000393,7.72e-10,61;CL:0000211,7.72e-10,61;CL:0000359,3.57e-08,32;CL:0000192,4.61e-08,43;CL:0000514,4.61e-08,43 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004290!3.33e-11!70;UBERON:0000914!3.12e-10!83;UBERON:0002329!3.12e-10!83;UBERON:0003077!3.12e-10!83;UBERON:0003059!3.12e-10!83;UBERON:0007282!3.12e-10!83;UBERON:0009618!3.12e-10!83;UBERON:0007285!3.12e-10!83;UBERON:0000486!3.13e-10!82;UBERON:0001134!2.53e-09!61;UBERON:0002036!2.53e-09!61;UBERON:0003082!2.53e-09!61;UBERON:0002385!1.84e-08!63;UBERON:0001015!1.84e-08!63;UBERON:0000383!1.84e-08!63;UBERON:0001637!2.13e-08!42;UBERON:0003509!2.13e-08!42;UBERON:0004572!2.13e-08!42;UBERON:0001737!1.29e-07!9;UBERON:0003104!2.05e-07!238;UBERON:0009142!2.05e-07!238;UBERON:0000490!2.30e-07!138 | |ontology_enrichment_uberon=UBERON:0004290!3.33e-11!70;UBERON:0000914!3.12e-10!83;UBERON:0002329!3.12e-10!83;UBERON:0003077!3.12e-10!83;UBERON:0003059!3.12e-10!83;UBERON:0007282!3.12e-10!83;UBERON:0009618!3.12e-10!83;UBERON:0007285!3.12e-10!83;UBERON:0000486!3.13e-10!82;UBERON:0001134!2.53e-09!61;UBERON:0002036!2.53e-09!61;UBERON:0003082!2.53e-09!61;UBERON:0002385!1.84e-08!63;UBERON:0001015!1.84e-08!63;UBERON:0000383!1.84e-08!63;UBERON:0001637!2.13e-08!42;UBERON:0003509!2.13e-08!42;UBERON:0004572!2.13e-08!42;UBERON:0001737!1.29e-07!9;UBERON:0003104!2.05e-07!238;UBERON:0009142!2.05e-07!238;UBERON:0000490!2.30e-07!138 | ||
|ontology_enrichment_uberon_v019=UBERON:0001737;3.71e-10;9!UBERON:0001557;3.71e-10;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007503,1.85e-13,78;UBERON:0002329,2.76e-13,71;UBERON:0003059,2.76e-13,71;UBERON:0007282,2.76e-13,71;UBERON:0004290,2.76e-13,71;UBERON:0009618,2.76e-13,71;UBERON:0003077,7.12e-13,72;UBERON:0007285,7.12e-13,72;UBERON:0007524,1.78e-12,73;UBERON:0000486,5.54e-11,83;UBERON:0001134,1.89e-10,62;UBERON:0002036,1.89e-10,62;UBERON:0003082,1.89e-10,62;UBERON:0001737,5.44e-10,9;UBERON:0002385,1.02e-09,64;UBERON:0001015,1.02e-09,64;UBERON:0000383,1.02e-09,64;UBERON:0000490,1.07e-08,148;UBERON:0001637,1.34e-08,42;UBERON:0003509,1.34e-08,42;UBERON:0004572,1.34e-08,42;UBERON:0005256,3.87e-08,122;UBERON:0002100,1.73e-07,199 | |||
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| ||
|short_description=p2@RPL27A | |short_description=p2@RPL27A | ||
}} | }} |
Latest revision as of 23:16, 24 September 2015
Short description: | p2@RPL27A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_RPL27A_5end |
Coexpression cluster: | NA |
Association with transcript: | -176bp_to_ENST00000526562_5end |
EntrezGene: | RPL27A |
HGNC: | 10329 |
UniProt: | E9PJD9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
muscle precursor cell | 4.21e-12 | 58 |
myoblast | 4.21e-12 | 58 |
multi-potent skeletal muscle stem cell | 4.21e-12 | 58 |
mesodermal cell | 2.66e-11 | 121 |
embryonic cell | 3.78e-11 | 250 |
muscle cell | 6.53e-11 | 55 |
electrically responsive cell | 7.72e-10 | 61 |
electrically active cell | 7.72e-10 | 61 |
vascular associated smooth muscle cell | 3.57e-08 | 32 |
smooth muscle cell | 4.61e-08 | 43 |
smooth muscle myoblast | 4.61e-08 | 43 |
Ontology term | p-value | n |
---|---|---|
epithelial vesicle | 1.85e-13 | 78 |
somite | 2.76e-13 | 71 |
presomitic mesoderm | 2.76e-13 | 71 |
presumptive segmental plate | 2.76e-13 | 71 |
dermomyotome | 2.76e-13 | 71 |
trunk paraxial mesoderm | 2.76e-13 | 71 |
paraxial mesoderm | 7.12e-13 | 72 |
presumptive paraxial mesoderm | 7.12e-13 | 72 |
dense mesenchyme tissue | 1.78e-12 | 73 |
multilaminar epithelium | 5.54e-11 | 83 |
skeletal muscle tissue | 1.89e-10 | 62 |
striated muscle tissue | 1.89e-10 | 62 |
myotome | 1.89e-10 | 62 |
larynx | 5.44e-10 | 9 |
muscle tissue | 1.02e-09 | 64 |
musculature | 1.02e-09 | 64 |
musculature of body | 1.02e-09 | 64 |
unilaminar epithelium | 1.07e-08 | 148 |
artery | 1.34e-08 | 42 |
arterial blood vessel | 1.34e-08 | 42 |
arterial system | 1.34e-08 | 42 |
trunk mesenchyme | 3.87e-08 | 122 |
trunk | 1.73e-07 | 199 |