FFCP PHASE1:Hg19::chr3:135916073..135916096,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55167 | |EntrezGene=55167 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25544 | |HGNC=25544 | ||
|TSSclassifier=strong | |||
|UniProt=C9IZ03 | |UniProt=C9IZ03 | ||
|association_with_transcript=0bp_to_ENST00000481989_5end | |association_with_transcript=0bp_to_ENST00000481989_5end | ||
|cluster_id=chr3:135916073..135916096,- | |||
|coexpression_cluster_id=C18 | |||
|description=CAGE_peak_6_at_MSL2_5end | |description=CAGE_peak_6_at_MSL2_5end | ||
|id=chr3:135916073..135916096,- | |id=chr3:135916073..135916096,- | ||
|ontology_enrichment_celltype=CL:0000542!2.87e-33!53;CL:0000051!2.87e-33!53;CL:0000838!1.49e-32!52;CL:0000738!4.94e-18!140;CL:0000791!2.27e-17!18;CL:0000789!2.27e-17!18;CL:0002420!2.27e-17!18;CL:0002419!2.27e-17!18;CL:0000790!2.27e-17!18;CL:0002087!1.15e-16!119;CL:0000084!7.45e-16!25;CL:0000827!7.45e-16!25;CL:0000945!2.04e-15!24;CL:0000826!2.04e-15!24;CL:0002031!4.94e-15!124;CL:0000037!5.82e-15!172;CL:0000566!5.82e-15!172;CL:0000988!2.07e-13!182;CL:0002032!1.51e-12!165;CL:0000837!1.51e-12!165;CL:0000236!5.58e-12!14;CL:0000625!1.53e-11!11;CL:0000624!8.34e-07!6 | |ontology_enrichment_celltype=CL:0000542!2.87e-33!53;CL:0000051!2.87e-33!53;CL:0000838!1.49e-32!52;CL:0000738!4.94e-18!140;CL:0000791!2.27e-17!18;CL:0000789!2.27e-17!18;CL:0002420!2.27e-17!18;CL:0002419!2.27e-17!18;CL:0000790!2.27e-17!18;CL:0002087!1.15e-16!119;CL:0000084!7.45e-16!25;CL:0000827!7.45e-16!25;CL:0000945!2.04e-15!24;CL:0000826!2.04e-15!24;CL:0002031!4.94e-15!124;CL:0000037!5.82e-15!172;CL:0000566!5.82e-15!172;CL:0000988!2.07e-13!182;CL:0002032!1.51e-12!165;CL:0000837!1.51e-12!165;CL:0000236!5.58e-12!14;CL:0000625!1.53e-11!11;CL:0000624!8.34e-07!6 | ||
|ontology_enrichment_celltype_v019=CL:0000791;3.87e-40;18!CL:0000789;3.87e-40;18!CL:0002419;3.87e-40;18!CL:0000084;4.20e-34;25!CL:0000542;1.83e-32;53!CL:0000625;1.37e-28;11!CL:0000236;1.66e-25;13!CL:0000624;8.64e-16;6!CL:0000945;1.30e-14;24!CL:0002087;7.52e-11;104!CL:0000898;3.86e-09;3!CL:0000226;6.04e-08;3!CL:0000842;6.04e-08;3!CL:0000623;8.82e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000542,1.64e-53,53;CL:0000051,1.64e-53,53;CL:0000838,1.01e-51,52;CL:0000791,4.34e-40,18;CL:0000789,4.34e-40,18;CL:0002420,4.34e-40,18;CL:0002419,4.34e-40,18;CL:0000790,4.34e-40,18;CL:0000084,5.30e-34,25;CL:0000827,5.30e-34,25;CL:0000625,1.42e-28,11;CL:0002087,2.43e-27,115;CL:0000738,1.32e-26,136;CL:0000236,1.63e-23,14;CL:0002031,3.89e-20,120;CL:0000037,2.95e-19,168;CL:0000988,1.12e-17,177;CL:0000624,9.34e-16,6;CL:0000945,1.19e-14,24;CL:0000826,1.19e-14,24;CL:0002032,2.75e-14,161;CL:0000837,2.75e-14,161;CL:0000898,3.71e-09,3;CL:0000226,4.72e-08,3;CL:0000842,4.72e-08,3;CL:0000623,8.50e-08,3;CL:0000825,8.50e-08,3 | |||
|ontology_enrichment_development_v019=CL:0000790;3.87e-40;18!CL:0000051;1.83e-32;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!3.00e-10!15;UBERON:0000179!3.00e-10!15;UBERON:0000463!3.00e-10!15;UBERON:0007023!6.96e-10!115;UBERON:0004177!7.83e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;5.23e-22;15!UBERON:0000179;5.23e-22;15!UBERON:0000463;5.23e-22;15!UBERON:0002390;8.47e-15;32!UBERON:0002193;2.18e-10;42!UBERON:0004177;5.76e-08;5!UBERON:0005057;5.76e-08;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,4.79e-22,15;UBERON:0000179,4.79e-22,15;UBERON:0000463,4.79e-22,15;UBERON:0004177,9.63e-09,7;UBERON:0005057,9.63e-09,7 | |||
|phase1_expression=0,0,0,0,0.446961094427288,0,0,0,0,0,0,0,0,0.123766352960047,0,0,0,0,0,0,0,0,0,0,0,0.305653622991805,0.656804715599566,0.944529375764151,0.393364276848904,1.91914699048606,0.77408061658038,0,0,0,0.542270404062111,0,0,0,1.20326668482085,0.868043482863407,0.447830948479849,1.94336199611388,0.257575567634187,0.145398238779565,0,0,0,0,0,0,0.256160706529101,0,0,0,0,0,0.272906150057846,0,0,0.320929027076094,0,0,0.199463657621632,0,0,0,0,0.251248665256743,0,0,1.21079900526674,0,0,0,0,0,0,0,0,0,0,0,8.79981222306614,5.46138611262132,8.89509253863555,4.26730222566507,6.4063357925762,4.59801951963587,4.62731410949403,6.67837628174755,5.69212969109448,7.04684627245127,3.44045905312706,0,0,0.263384084775077,11.80258620683,2.75107533924415,6.16804496998528,8.86088425570594,17.2738801315803,15.6237775892462,15.5861382726329,4.56782873229212,7.9543595018206,6.64601683750863,7.58250818542044,4.48319619039863,4.03183977435623,5.75532666112866,4.42160028457357,8.69409257205158,16.0149488215025,13.1095005763959,15.6803285707465,7.0251792472491,10.3469533272519,7.55980380061786,12.1449452169361,13.3797474016121,13.6727525309848,12.3558765778289,17.6172889320994,19.3259782843172,16.240994451805,9.47109008176067,8.21127996921047,6.45141578319144,2.67440195783507,8.68946423296794,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0.130979075497713,0,0,0,0,0.132957960518865,0.715471872916026,1.14398982156026,1.11437250398869,0.198762407366705,0,0,0,0,0,0,0,0,0.33472061276467,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0.18611685633159,0.168776332241266,0.0974370051611986,0,0.0920498986422993,0,0,0.10075209822764,0,0.193260853163297,0,0,0.121973706129595,0.265059536642971,0.348581828608555,0.10366105501537,0,0.36497735907583,0,0,0,0,0,0,0.168584690078102,0,0,0.217879444092406,0,0,0,0,0,0,0,0,0,0,0,1.7658523976586,0,0,0,0,0,0.0925884451585296,0,0,0,0.115930404975077,0,0,0,0,0,0,0.246217006087397,0,0,0,0,0.141775097242386,0,0,0,0.492663237895943,0.264145302039678,0,0,0.12624243342638,0,0,0,0,0,0,0,0.112131084345361,0.43596006883328,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0.502257091432126,0,0,0,0,0,0,0,0.896681151948218,5.12279976525011,2.80315847317372,3.9786341246722,0,0,0,0,0,0,0,0.414415513436035,0,0,0,0,0,0.157702415033935,0,0,0,0,0,0,0,0,0,6.82334486205528,4.74571241800957,2.881644060693,0,0,0,0.248107807818777,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0.184161977871793,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0.219259876645935,0.784306353074702,0,0,0,0.206082023295445,0,0.082509499920588,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0.165284915360978,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.551365343546124,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,0,0,0,0.282431402330337,0,0,0,0,8.11916174771471,9.94028369285088,5.69647187174163,6.4322579373603,8.63860773481008,5.18778648954174,14.5808488054291,3.96562588147135,0.106824071127473,0,0,1.11481905075431,0.144269212976445,3.27252479402705,0.159426272728822,0.399158742865633,0.383010740264733,0.423347165447766,0,0.280797178113459,0,0,0,0.169291777801603,0,0.201799707191048,0,0,0,0,0.166849141711909,0,0,0,0,0,0,0,0.146508179271894,0.121360521749513,0,0,0,0,0.307160702099232,0,0,0,0,0,0,3.86797481743607,0,0.306806047506464,1.6001024709939,0,0.179736702294654,0,0,0.295930216910801,2.3948309234694,0,0.969332746095218,0.463840490809256,0,0,0,0,0.1137934482855,0,0,0,0,0,0,0.241192877250816,0,0.331737779793674,0,0,0.10893846351899,0,0.384751292518985,0,0,0,0,0.31900115973192,0,0,1.02193298195737,0,0,0,0,0,0,0.158936578980379,0,0.163232808159148,0,0,0,0.619202951523374,0,0,0.123563938946503,0.104421949505455,0,0,0,3.10173141666632,0.19566461893209,0,0,0,0.30607276163049,0.31593289814244,0,0.103688191397247,0,0,0,0,0.284609546029793,0.138674673013139,0,0.0979923974143777,0,0.34945333648406,0,0,0.219267951258557,0,0.193978032976839,0.0882561266915003,0.225980740780532,0,0,0.379864775735272,0,0,0.213452994739353,0.19980960958213,0.288180834308212,0,0,0,0,0.235694034616795,0,0,0.101998217636322,0,0,0,0,0,0.525774708558629,0,0.229160424011684,0,0,0,0,0.134366944973453,0,0,0.0787831823072236,0.164831716762333,0.0674035438541849,0,0.169346664131569,0,0.272406812223151,0.321506296930038,0.137539436597234,0.83088067605837,0,0,0.303747783290123,0,0.315222829196793,0,0.105600336519406,0.179287339332845,0,0,0,0,0,0.864221491201268,0,0,0.082092520749339,0.170388021785422,0,0.146552233678082,0,0,0.13223260174269,0,0,0.213574825135389,0.314408610199332,0,6.45015828355536,1.38328142328561,0.730755590285376,0,0,0,0,0,0.157054096250234,0,0.122026264901963,0.751145584238999,0,0,0.0620964029413835,0,0.124980407962107,0,0,0,0.468334905806882,0,0,0,0,0,0,0,0,0,0,0.147855149989634,0,0,0,0,0,0,0,0,0,0.181848659202559,0,0,0,0,0,0,0,0.192619830407303,0,0,0,0,0,0.179088841081487,0,0,0,0,0,0,0,0.607719912354764,0,0,0.265729680626726,0,0,0,0,0,0,0.172214979660816,0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| ||
|short_description=p6@MSL2 | |short_description=p6@MSL2 | ||
}} | }} |
Latest revision as of 23:43, 24 September 2015
Short description: | p6@MSL2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_MSL2_5end |
Coexpression cluster: | C18_CD4_CD8_thymus_Whole_Peripheral_Natural_blood |
Association with transcript: | 0bp_to_ENST00000481989_5end |
EntrezGene: | MSL2 |
HGNC: | 25544 |
UniProt: | C9IZ03 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 1.64e-53 | 53 |
common lymphoid progenitor | 1.64e-53 | 53 |
lymphoid lineage restricted progenitor cell | 1.01e-51 | 52 |
mature alpha-beta T cell | 4.34e-40 | 18 |
alpha-beta T cell | 4.34e-40 | 18 |
immature T cell | 4.34e-40 | 18 |
mature T cell | 4.34e-40 | 18 |
immature alpha-beta T cell | 4.34e-40 | 18 |
T cell | 5.30e-34 | 25 |
pro-T cell | 5.30e-34 | 25 |
CD8-positive, alpha-beta T cell | 1.42e-28 | 11 |
nongranular leukocyte | 2.43e-27 | 115 |
leukocyte | 1.32e-26 | 136 |
B cell | 1.63e-23 | 14 |
hematopoietic lineage restricted progenitor cell | 3.89e-20 | 120 |
hematopoietic stem cell | 2.95e-19 | 168 |
hematopoietic cell | 1.12e-17 | 177 |
CD4-positive, alpha-beta T cell | 9.34e-16 | 6 |
lymphocyte of B lineage | 1.19e-14 | 24 |
pro-B cell | 1.19e-14 | 24 |
hematopoietic oligopotent progenitor cell | 2.75e-14 | 161 |
hematopoietic multipotent progenitor cell | 2.75e-14 | 161 |
naive T cell | 3.71e-09 | 3 |
single nucleate cell | 4.72e-08 | 3 |
mononuclear cell | 4.72e-08 | 3 |
natural killer cell | 8.50e-08 | 3 |
pro-NK cell | 8.50e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
blood | 4.79e-22 | 15 |
haemolymphatic fluid | 4.79e-22 | 15 |
organism substance | 4.79e-22 | 15 |
hemopoietic organ | 9.63e-09 | 7 |
immune organ | 9.63e-09 | 7 |