FFCP PHASE1:Hg19::chr11:88911074..88911102,+: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=7299 | |EntrezGene=7299 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12442 | |HGNC=12442 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=13bp_to_ENST00000526139_5end | |||
|cluster_id=chr11:88911074..88911102,+ | |||
|coexpression_cluster_id=C58 | |||
|description=CAGE_peak_2_at_TYR_5end | |||
|id=chr11:88911074..88911102,+ | |||
|ontology_enrichment_celltype=CL:0000147!8.96e-51!14;CL:0000148!1.50e-40!10;CL:0000541!1.50e-40!10;CL:0000325!6.48e-26!39;CL:0000710!8.32e-24!20;CL:0002077!4.13e-23!33;CL:0000149!4.76e-21!4;CL:0000075!1.42e-20!27;CL:0002567!1.61e-16!3;CL:0002586!4.23e-16!3;CL:0000221!1.84e-10!71;CL:0000333!4.55e-10!41;CL:0000453!1.08e-09!5;CL:0002322!4.21e-09!5;CL:0000133!6.28e-08!59 | |||
|ontology_enrichment_celltype_v019=CL:0000147;9.63e-71;14!CL:0000148;2.01e-49;10!CL:0000149;3.55e-40;4!CL:0002567;3.62e-31;3!CL:0002586;2.48e-30;3!CL:0000710;1.95e-24;20!CL:0000453;3.95e-18;5!CL:0000075;6.16e-18;27!CL:0002077;1.51e-12;34!CL:0002566;9.57e-12;1!CL:0000990;2.45e-10;8!CL:0000451;1.49e-08;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000147,9.63e-71,14;CL:0000148,2.01e-49,10;CL:0000541,2.01e-49,10;CL:0000149,3.55e-40,4;CL:0002567,3.62e-31,3;CL:0002586,2.48e-30,3;CL:0000710,1.95e-24,20;CL:0000453,3.61e-18,5;CL:0000075,6.16e-18,27;CL:0002077,4.18e-14,34;CL:0002566,9.57e-12,1;CL:0000333,5.25e-11,41;CL:0000990,2.33e-10,8;CL:0000451,1.43e-08,10;CL:0000133,1.53e-07,59 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:1909!1.72e-11!2 | |||
|ontology_enrichment_disease_v019=DOID:1909;3.47e-21;2 | |||
|ontology_enrichment_disease_v019_2=DOID:1909,3.47e-21,2 | |||
|ontology_enrichment_uberon=UBERON:0000966!9.54e-17!5;UBERON:0005388!9.54e-17!5;UBERON:0001802!9.54e-17!5;UBERON:0001781!4.23e-16!3;UBERON:0001782!4.23e-16!3;UBERON:0005424!4.23e-16!3;UBERON:0002240!5.59e-15!3;UBERON:0000970!1.02e-14!20;UBERON:0002104!5.89e-14!21;UBERON:0000020!1.24e-12!23;UBERON:0001032!4.69e-12!24;UBERON:0004456!4.69e-12!24;UBERON:0000019!6.52e-12!19;UBERON:0000047!6.52e-12!19;UBERON:0004088!6.52e-12!19;UBERON:0003072!6.52e-12!19;UBERON:0003071!6.52e-12!19;UBERON:0004128!6.52e-12!19;UBERON:0007625!4.85e-11!11;UBERON:0001456!1.09e-10!21;UBERON:0005085!1.03e-09!29;UBERON:0005174!3.45e-09!5;UBERON:0001137!3.45e-09!5;UBERON:0001003!9.36e-09!14;UBERON:0007376!9.36e-09!14;UBERON:0007383!9.36e-09!14 | |||
|ontology_enrichment_uberon_v019=UBERON:0000966;5.55e-32;5!UBERON:0005388;5.55e-32;5!UBERON:0001802;5.55e-32;5!UBERON:0001781;2.48e-30;3!UBERON:0001782;2.48e-30;3!UBERON:0000970;2.47e-12;20!UBERON:0002104;9.64e-12;21!UBERON:0007029;5.16e-11;1!UBERON:0010371;7.19e-11;31!UBERON:0000020;1.03e-10;23!UBERON:0001032;2.92e-10;24!UBERON:0004456;2.92e-10;24!UBERON:0007625;1.04e-08;11!UBERON:0000019;1.32e-08;19!UBERON:0000047;1.32e-08;19!UBERON:0004088;1.32e-08;19!UBERON:0010230;1.32e-08;19!UBERON:0001456;8.41e-08;21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001782,2.48e-30,3;UBERON:0005424,2.48e-30,3;UBERON:0000966,1.02e-26,6;UBERON:0005388,1.02e-26,6;UBERON:0001802,1.02e-26,6;UBERON:0001781,6.25e-23,4;UBERON:0000970,9.64e-12,21;UBERON:0002104,9.64e-12,21;UBERON:0007029,4.91e-11,1;UBERON:0000020,2.92e-10,24;UBERON:0001032,2.92e-10,24;UBERON:0004456,2.92e-10,24;UBERON:0007625,1.04e-08,11;UBERON:0000019,3.49e-08,20;UBERON:0000047,3.49e-08,20;UBERON:0010312,3.49e-08,20;UBERON:0004088,3.49e-08,20;UBERON:0010230,3.49e-08,20;UBERON:0003072,3.49e-08,20;UBERON:0004128,3.49e-08,20;UBERON:0003071,3.49e-08,20;UBERON:0001456,1.87e-07,22 | |||
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|short_description=p2@TYR | |||
}} | }} |
Latest revision as of 00:07, 25 September 2015
Short description: | p2@TYR |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_TYR_5end |
Coexpression cluster: | C58_Melanocyte_melanoma_retina_Retinal_eye_migratory_H9 |
Association with transcript: | 13bp_to_ENST00000526139_5end |
EntrezGene: | TYR |
HGNC: | 12442 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pigment cell | 9.63e-71 | 14 |
melanocyte | 2.01e-49 | 10 |
melanoblast | 2.01e-49 | 10 |
visual pigment cell | 3.55e-40 | 4 |
light melanocyte | 3.62e-31 | 3 |
retinal pigment epithelial cell | 2.48e-30 | 3 |
neurecto-epithelial cell | 1.95e-24 | 20 |
Langerhans cell | 3.61e-18 | 5 |
columnar/cuboidal epithelial cell | 6.16e-18 | 27 |
ecto-epithelial cell | 4.18e-14 | 34 |
dark melanocyte | 9.57e-12 | 1 |
migratory neural crest cell | 5.25e-11 | 41 |
conventional dendritic cell | 2.33e-10 | 8 |
dendritic cell | 1.43e-08 | 10 |
neurectodermal cell | 1.53e-07 | 59 |
Ontology term | p-value | n |
---|---|---|
pigmented layer of retina | 2.48e-30 | 3 |
presumptive retinal pigmented epithelium | 2.48e-30 | 3 |
retina | 1.02e-26 | 6 |
photoreceptor array | 1.02e-26 | 6 |
posterior segment of eyeball | 1.02e-26 | 6 |
layer of retina | 6.25e-23 | 4 |
eye | 9.64e-12 | 21 |
visual system | 9.64e-12 | 21 |
surface | 4.91e-11 | 1 |
sense organ | 2.92e-10 | 24 |
sensory system | 2.92e-10 | 24 |
entire sense organ system | 2.92e-10 | 24 |
pigment epithelium of eye | 1.04e-08 | 11 |
camera-type eye | 3.49e-08 | 20 |
simple eye | 3.49e-08 | 20 |
immature eye | 3.49e-08 | 20 |
ocular region | 3.49e-08 | 20 |
eyeball of camera-type eye | 3.49e-08 | 20 |
optic cup | 3.49e-08 | 20 |
optic vesicle | 3.49e-08 | 20 |
eye primordium | 3.49e-08 | 20 |
face | 1.87e-07 | 22 |
Ontology term | p-value | n |
---|---|---|
melanoma | 3.47e-21 | 2 |