FFCP PHASE1:Hg19::chr11:925824..925976,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DPIdataset= | |DHSsupport=supported | ||
|DPIdataset=robust | |||
|EntrezGene=161 | |EntrezGene=161 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC=562 | |HGNC=562 | ||
|TSSclassifier= | |TSSclassifier=strong | ||
|UniProt=E7EVC3,C9J1S3,O94973,E7ESQ4,E9PNC4,E9PJJ7,E9PR62 | |UniProt=E7EVC3,C9J1S3,O94973,E7ESQ4,E9PNC4,E9PJJ7,E9PR62 | ||
|association_with_transcript=0bp_to_ENST00000332231,ENST00000417081,ENST00000448757,ENST00000448903,ENST00000452310,ENST00000525796,ENST00000528195,ENST00000528815,ENST00000529125,ENST00000529858,ENST00000534328,uc001lss.2,uc001lst.1,uc009yco.1_5end | |association_with_transcript=0bp_to_ENST00000332231,ENST00000417081,ENST00000448757,ENST00000448903,ENST00000452310,ENST00000525796,ENST00000528195,ENST00000528815,ENST00000529125,ENST00000529858,ENST00000534328,uc001lss.2,uc001lst.1,uc009yco.1_5end | ||
|cluster_id=chr11:925824..925976,+ | |||
|description=CAGE_peak_1_at_AP2A2_5end | |description=CAGE_peak_1_at_AP2A2_5end | ||
|id=chr11:925824..925976,+ | |id=chr11:925824..925976,+ |
Latest revision as of 01:45, 25 September 2015
Short description: | p1@AP2A2 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_AP2A2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000332231, ENST00000417081, ENST00000448757, ENST00000448903, ENST00000452310, ENST00000525796, ENST00000528195, ENST00000528815, ENST00000529125, ENST00000529858, ENST00000534328, uc001lss.2, uc001lst.1, uc009yco.1_5end |
EntrezGene: | AP2A2 |
HGNC: | 562 |
UniProt: | E7EVC3C9J1S3O94973E7ESQ4E9PNC4E9PJJ7E9PR62 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p1@AP2A2 |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
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meso-epithelial cell | 2.60e-13 | 45 |
endothelial cell | 5.84e-13 | 36 |
mesodermal cell | 1.65e-09 | 121 |
endothelial cell of vascular tree | 4.94e-07 | 24 |
epithelial cell of nephron | 5.29e-07 | 15 |
blood vessel endothelial cell | 8.25e-07 | 18 |
embryonic blood vessel endothelial progenitor cell | 8.25e-07 | 18 |
Showing 1 to 7 of 7 entries
Ontology term | p-value | n |
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tube | 1.12e-26 | 192 |
anatomical conduit | 2.92e-23 | 240 |
cell layer | 3.25e-23 | 309 |
epithelium | 5.79e-23 | 306 |
neural plate | 5.47e-21 | 82 |
presumptive neural plate | 5.47e-21 | 82 |
neurectoderm | 1.30e-20 | 86 |
neural tube | 4.77e-20 | 56 |
neural rod | 4.77e-20 | 56 |
future spinal cord | 4.77e-20 | 56 |
Showing 1 to 10 of 78 entries