FFCP PHASE1:Hg19::chr22:44427260..44427270,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=29780 | |EntrezGene=29780 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14653 | |HGNC=14653 | ||
|TSSclassifier=strong | |||
|UniProt=B0QYP8 | |UniProt=B0QYP8 | ||
|association_with_transcript=15bp_to_ENST00000444029_5end | |association_with_transcript=15bp_to_ENST00000444029_5end | ||
|cluster_id=chr22:44427260..44427270,+ | |||
|coexpression_cluster_id=C12 | |coexpression_cluster_id=C12 | ||
|description=CAGE_peak_19_at_PARVB_5end | |description=CAGE_peak_19_at_PARVB_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0002274!4.40e-34!5;CL:0000457!4.40e-34!5;CL:0002191!4.40e-34!5;CL:0000097!4.40e-34!5;CL:0000831!4.40e-34!5;CL:0002028!4.40e-34!5;CL:0000163!7.10e-19!9;CL:0000767!1.32e-09!3;CL:0000810!5.33e-08!1;CL:0000895!5.33e-08!1;CL:0002436!5.33e-08!1;CL:0002427!5.33e-08!1;CL:0002428!5.33e-08!1;CL:0002429!5.33e-08!1;CL:0002433!5.33e-08!1;CL:0002431!5.33e-08!1;CL:0002432!5.33e-08!1;CL:0001024!6.52e-08!1;CL:0000763!2.24e-07!112;CL:0000049!2.24e-07!112;CL:0000988!5.57e-07!182 | |ontology_enrichment_celltype=CL:0002274!4.40e-34!5;CL:0000457!4.40e-34!5;CL:0002191!4.40e-34!5;CL:0000097!4.40e-34!5;CL:0000831!4.40e-34!5;CL:0002028!4.40e-34!5;CL:0000163!7.10e-19!9;CL:0000767!1.32e-09!3;CL:0000810!5.33e-08!1;CL:0000895!5.33e-08!1;CL:0002436!5.33e-08!1;CL:0002427!5.33e-08!1;CL:0002428!5.33e-08!1;CL:0002429!5.33e-08!1;CL:0002433!5.33e-08!1;CL:0002431!5.33e-08!1;CL:0002432!5.33e-08!1;CL:0001024!6.52e-08!1;CL:0000763!2.24e-07!112;CL:0000049!2.24e-07!112;CL:0000988!5.57e-07!182 | ||
|ontology_enrichment_celltype_v019=CL:0000097;1.24e-125;5!CL:0000163;2.58e-70;9!CL:0000151;3.83e-18;36 | |ontology_enrichment_celltype_v019=CL:0000097;1.24e-125;5!CL:0000163;2.58e-70;9!CL:0000151;3.83e-18;36 | ||
|ontology_enrichment_celltype_v019_2=CL:0000097,1.24e-125,5;CL:0002028,1.24e-125,5;CL:0000163,2.58e-70,9;CL:0000151,2.87e-18,36;CL:0000839,3.78e-10,66;CL:0000557,5.22e-10,67;CL:0000763,1.03e-09,108;CL:0000049,1.03e-09,108;CL:0000766,2.29e-09,72 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:8552!4.35e-08!1 | |ontology_enrichment_disease=DOID:8552!4.35e-08!1 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!5.82e-07!102;UBERON:0003061!5.82e-07!102 | |ontology_enrichment_uberon=UBERON:0002390!5.82e-07!102;UBERON:0003061!5.82e-07!102 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,6.50e-09,76;UBERON:0001474,2.59e-08,82;UBERON:0004765,1.24e-07,90;UBERON:0002405,2.08e-07,93;UBERON:0002390,4.61e-07,98;UBERON:0003061,4.61e-07,98;UBERON:0001434,6.20e-07,100 | |||
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|short_description=p19@PARVB | |short_description=p19@PARVB | ||
}} | }} |
Latest revision as of 02:11, 25 September 2015
Short description: | p19@PARVB |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_19_at_PARVB_5end |
Coexpression cluster: | C12_Mast_Basophils_immature_chorionic_mature_CD14_Eosinophils |
Association with transcript: | 15bp_to_ENST00000444029_5end |
EntrezGene: | PARVB |
HGNC: | 14653 |
UniProt: | B0QYP8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 1.24e-125 | 5 |
basophil mast progenitor cell | 1.24e-125 | 5 |
endocrine cell | 2.58e-70 | 9 |
secretory cell | 2.87e-18 | 36 |
myeloid lineage restricted progenitor cell | 3.78e-10 | 66 |
granulocyte monocyte progenitor cell | 5.22e-10 | 67 |
myeloid cell | 1.03e-09 | 108 |
common myeloid progenitor | 1.03e-09 | 108 |
myeloid leukocyte | 2.29e-09 | 72 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 6.50e-09 | 76 |
bone element | 2.59e-08 | 82 |
skeletal element | 1.24e-07 | 90 |
immune system | 2.08e-07 | 93 |
hematopoietic system | 4.61e-07 | 98 |
blood island | 4.61e-07 | 98 |
skeletal system | 6.20e-07 | 100 |