FFCP PHASE1:Hg19::chr4:129210063..129210086,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10424 | |EntrezGene=10424 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16089 | |HGNC=16089 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-79bp_to_ENST00000520121,NM_006320_5end | |association_with_transcript=-79bp_to_ENST00000520121,NM_006320_5end | ||
|cluster_id=chr4:129210063..129210086,- | |||
|coexpression_cluster_id=C22 | |coexpression_cluster_id=C22 | ||
|description=CAGE_peak_12_at_PGRMC2_5end | |description=CAGE_peak_12_at_PGRMC2_5end | ||
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|ontology_enrichment_celltype=CL:0000624!2.53e-13!6;CL:0000791!2.59e-10!18;CL:0000789!2.59e-10!18;CL:0002420!2.59e-10!18;CL:0002419!2.59e-10!18;CL:0000790!2.59e-10!18;CL:0000542!3.69e-09!53;CL:0000051!3.69e-09!53;CL:0000838!2.25e-08!52;CL:0000084!3.78e-08!25;CL:0000827!3.78e-08!25;CL:0000037!5.29e-08!172;CL:0000566!5.29e-08!172;CL:0000623!1.92e-07!3;CL:0000825!1.92e-07!3;CL:0000898!2.04e-07!3;CL:0000842!4.86e-07!3;CL:0000988!5.00e-07!182 | |ontology_enrichment_celltype=CL:0000624!2.53e-13!6;CL:0000791!2.59e-10!18;CL:0000789!2.59e-10!18;CL:0002420!2.59e-10!18;CL:0002419!2.59e-10!18;CL:0000790!2.59e-10!18;CL:0000542!3.69e-09!53;CL:0000051!3.69e-09!53;CL:0000838!2.25e-08!52;CL:0000084!3.78e-08!25;CL:0000827!3.78e-08!25;CL:0000037!5.29e-08!172;CL:0000566!5.29e-08!172;CL:0000623!1.92e-07!3;CL:0000825!1.92e-07!3;CL:0000898!2.04e-07!3;CL:0000842!4.86e-07!3;CL:0000988!5.00e-07!182 | ||
|ontology_enrichment_celltype_v019=CL:0000624;2.48e-46;6!CL:0000791;8.21e-34;18!CL:0000789;8.21e-34;18!CL:0002419;8.21e-34;18!CL:0000084;5.54e-24;25!CL:0000623;6.01e-24;3!CL:0000898;9.98e-24;3!CL:0000815;2.88e-16;2!CL:0000792;2.88e-16;2!CL:0002677;2.88e-16;2!CL:0000767;5.29e-11;3!CL:0000542;5.47e-11;53!CL:0000226;7.35e-11;3!CL:0000842;7.35e-11;3!CL:0000895;3.18e-09;1!CL:0000094;4.45e-09;8!CL:0000625;5.53e-07;11!CL:0000081;9.95e-07;11 | |ontology_enrichment_celltype_v019=CL:0000624;2.48e-46;6!CL:0000791;8.21e-34;18!CL:0000789;8.21e-34;18!CL:0002419;8.21e-34;18!CL:0000084;5.54e-24;25!CL:0000623;6.01e-24;3!CL:0000898;9.98e-24;3!CL:0000815;2.88e-16;2!CL:0000792;2.88e-16;2!CL:0002677;2.88e-16;2!CL:0000767;5.29e-11;3!CL:0000542;5.47e-11;53!CL:0000226;7.35e-11;3!CL:0000842;7.35e-11;3!CL:0000895;3.18e-09;1!CL:0000094;4.45e-09;8!CL:0000625;5.53e-07;11!CL:0000081;9.95e-07;11 | ||
|ontology_enrichment_celltype_v019_2=CL:0000624,1.74e-46,6;CL:0000791,5.92e-34,18;CL:0000789,5.92e-34,18;CL:0002420,5.92e-34,18;CL:0002419,5.92e-34,18;CL:0000790,5.92e-34,18;CL:0000084,4.39e-24,25;CL:0000827,4.39e-24,25;CL:0000623,5.79e-24,3;CL:0000825,5.79e-24,3;CL:0000898,7.31e-24,3;CL:0000838,1.52e-19,52;CL:0000542,3.90e-19,53;CL:0000051,3.90e-19,53;CL:0000815,2.77e-16,2;CL:0000792,2.77e-16,2;CL:0002677,2.77e-16,2;CL:0000738,6.37e-15,136;CL:0002087,3.17e-12,115;CL:0000037,1.81e-11,168;CL:0000767,5.43e-11,3;CL:0000226,8.14e-11,3;CL:0000842,8.14e-11,3;CL:0000988,1.02e-10,177;CL:0000810,2.40e-09,1;CL:0000895,2.40e-09,1;CL:0002436,2.40e-09,1;CL:0002427,2.40e-09,1;CL:0002428,2.40e-09,1;CL:0002429,2.40e-09,1;CL:0002433,2.40e-09,1;CL:0002431,2.40e-09,1;CL:0002432,2.40e-09,1;CL:0002032,2.83e-09,161;CL:0000837,2.83e-09,161;CL:0000094,4.21e-09,8;CL:0002031,1.58e-08,120;CL:0000625,5.10e-07,11;CL:0000081,9.56e-07,11 | |||
|ontology_enrichment_development_v019=CL:0000790;8.21e-34;18!CL:0000051;5.47e-11;53!CL:0002427;3.18e-09;1 | |ontology_enrichment_development_v019=CL:0000790;8.21e-34;18!CL:0000051;5.47e-11;53!CL:0002427;3.18e-09;1 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p12@PGRMC2 | |short_description=p12@PGRMC2 | ||
}} | }} |
Latest revision as of 03:03, 25 September 2015
Short description: | p12@PGRMC2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_PGRMC2_5end |
Coexpression cluster: | C22_CD4_CD8_Natural_Basophils_CD14_Peripheral_CD19 |
Association with transcript: | -79bp_to_ENST00000520121, NM_006320_5end |
EntrezGene: | PGRMC2 |
HGNC: | 16089 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data