FFCP PHASE1:Hg19::chr19:10959043..10959111,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=255809 | |EntrezGene=255809 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=34073 | |HGNC=34073 | ||
|TSSclassifier=strong | |||
|UniProt=A8MVS5 | |UniProt=A8MVS5 | ||
|association_with_transcript=0bp_to_ENST00000397820,NM_001136482,uc010dxm.1_5end | |association_with_transcript=0bp_to_ENST00000397820,NM_001136482,uc010dxm.1_5end | ||
|cluster_id=chr19:10959043..10959111,+ | |||
|coexpression_cluster_id=C26 | |||
|description=CAGE_peak_1_at_C19orf38_5end | |description=CAGE_peak_1_at_C19orf38_5end | ||
|id=chr19:10959043..10959111,+ | |id=chr19:10959043..10959111,+ | ||
|ontology_enrichment_celltype=CL:0000037!5.03e-50!172;CL:0000566!5.03e-50!172;CL:0000988!2.69e-47!182;CL:0002032!5.78e-46!165;CL:0000837!5.78e-46!165;CL:0000738!7.91e-45!140;CL:0002087!8.28e-42!119;CL:0000763!5.54e-40!112;CL:0000049!5.54e-40!112;CL:0000766!1.97e-39!76;CL:0002194!9.96e-38!63;CL:0000576!9.96e-38!63;CL:0000040!9.96e-38!63;CL:0000559!9.96e-38!63;CL:0002009!1.63e-36!65;CL:0002031!3.00e-36!124;CL:0002057!6.20e-35!42;CL:0000839!8.06e-34!70;CL:0000557!3.61e-33!71;CL:0000860!5.58e-31!45;CL:0002393!2.09e-08!9;CL:0002397!2.09e-08!9;CL:0000094!4.34e-07!8;CL:0000542!7.99e-07!53;CL:0000051!7.99e-07!53 | |ontology_enrichment_celltype=CL:0000037!5.03e-50!172;CL:0000566!5.03e-50!172;CL:0000988!2.69e-47!182;CL:0002032!5.78e-46!165;CL:0000837!5.78e-46!165;CL:0000738!7.91e-45!140;CL:0002087!8.28e-42!119;CL:0000763!5.54e-40!112;CL:0000049!5.54e-40!112;CL:0000766!1.97e-39!76;CL:0002194!9.96e-38!63;CL:0000576!9.96e-38!63;CL:0000040!9.96e-38!63;CL:0000559!9.96e-38!63;CL:0002009!1.63e-36!65;CL:0002031!3.00e-36!124;CL:0002057!6.20e-35!42;CL:0000839!8.06e-34!70;CL:0000557!3.61e-33!71;CL:0000860!5.58e-31!45;CL:0002393!2.09e-08!9;CL:0002397!2.09e-08!9;CL:0000094!4.34e-07!8;CL:0000542!7.99e-07!53;CL:0000051!7.99e-07!53 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.22e-31;33!CL:0002057;1.22e-31;33!CL:0000473;1.15e-30;39!CL:0000234;1.15e-30;39!CL:0000576;2.07e-29;48!CL:0000766;1.82e-22;69!CL:0000763;1.35e-17;100!CL:0002087;4.76e-14;104!CL:0000738;1.97e-11;136!CL:0000988;3.57e-10;177!CL:0000094;1.53e-08;8!CL:0002393;2.56e-07;6!CL:0002397;2.56e-07;6!CL:0000081;8.30e-07;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,3.39e-57,168;CL:0000988,1.24e-55,177;CL:0000766,7.04e-54,72;CL:0002032,5.70e-53,161;CL:0000837,5.70e-53,161;CL:0002194,2.11e-52,59;CL:0000576,2.11e-52,59;CL:0000040,2.11e-52,59;CL:0000559,2.11e-52,59;CL:0000763,3.95e-52,108;CL:0000049,3.95e-52,108;CL:0002009,7.53e-50,61;CL:0000738,1.01e-49,136;CL:0002087,8.03e-49,115;CL:0000473,9.70e-49,48;CL:0000234,9.70e-49,48;CL:0000839,1.58e-45,66;CL:0000557,6.30e-45,67;CL:0000860,1.04e-43,42;CL:0002057,1.04e-43,42;CL:0002031,1.12e-40,120;CL:0002393,3.40e-10,9;CL:0002397,3.40e-10,9;CL:0000134,1.36e-09,354;CL:0002320,8.68e-09,361;CL:0000094,1.54e-08,8;CL:0000081,7.99e-07,11 | |||
|ontology_enrichment_development_v019=CL:0002057;1.95e-31;42!CL:0000049;9.56e-16;108 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:8692;5.58e-07;31 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,3.48e-07,31 | |||
|ontology_enrichment_uberon=UBERON:0002390!2.36e-39!102;UBERON:0003061!2.36e-39!102;UBERON:0002193!2.02e-34!112;UBERON:0002371!4.53e-28!80;UBERON:0007023!1.08e-27!115;UBERON:0001474!1.18e-24!86;UBERON:0002405!2.84e-21!115;UBERON:0004765!2.21e-18!101;UBERON:0001434!2.21e-18!101;UBERON:0003081!1.49e-11!216;UBERON:0000178!6.84e-11!15;UBERON:0000179!6.84e-11!15;UBERON:0000463!6.84e-11!15;UBERON:0002204!3.08e-09!167;UBERON:0001049!1.46e-08!57;UBERON:0005068!1.46e-08!57;UBERON:0006241!1.46e-08!57;UBERON:0007135!1.46e-08!57;UBERON:0003080!4.35e-07!42;UBERON:0002780!8.27e-07!41;UBERON:0001890!8.27e-07!41;UBERON:0006240!8.27e-07!41 | |ontology_enrichment_uberon=UBERON:0002390!2.36e-39!102;UBERON:0003061!2.36e-39!102;UBERON:0002193!2.02e-34!112;UBERON:0002371!4.53e-28!80;UBERON:0007023!1.08e-27!115;UBERON:0001474!1.18e-24!86;UBERON:0002405!2.84e-21!115;UBERON:0004765!2.21e-18!101;UBERON:0001434!2.21e-18!101;UBERON:0003081!1.49e-11!216;UBERON:0000178!6.84e-11!15;UBERON:0000179!6.84e-11!15;UBERON:0000463!6.84e-11!15;UBERON:0002204!3.08e-09!167;UBERON:0001049!1.46e-08!57;UBERON:0005068!1.46e-08!57;UBERON:0006241!1.46e-08!57;UBERON:0007135!1.46e-08!57;UBERON:0003080!4.35e-07!42;UBERON:0002780!8.27e-07!41;UBERON:0001890!8.27e-07!41;UBERON:0006240!8.27e-07!41 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;2.62e-13;15!UBERON:0000179;2.62e-13;15!UBERON:0000463;2.62e-13;15!UBERON:0002390;3.48e-08;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,3.38e-52,98;UBERON:0003061,3.38e-52,98;UBERON:0002193,6.90e-47,108;UBERON:0002371,3.04e-38,76;UBERON:0002405,7.36e-35,93;UBERON:0001474,1.31e-33,82;UBERON:0004765,1.91e-28,90;UBERON:0001434,3.10e-23,100;UBERON:0003081,6.23e-18,203;UBERON:0007023,3.44e-16,114;UBERON:0000178,2.51e-13,15;UBERON:0000179,2.51e-13,15;UBERON:0000463,2.51e-13,15;UBERON:0002204,2.47e-08,167;UBERON:0002384,4.96e-08,371 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.36162573225888,0,0.730310090387373,0.487932798790507,0,0,0,0,0,0,0.534893840235659,0.656804715599566,0.472264687882075,143.971325326699,68.3216328613039,163.950274591724,0,0,0,0.0774672005803016,0,29.6536443728196,134.066888864714,233.032647960305,160.805055200446,8.95661896959697,5.50619232232265,5.40908692031792,192.798064621703,179.491073252184,161.560984751086,222.202159281834,203.939272458826,182.417052457216,232.167760603975,248.988206746286,199.827484255855,260.97248031762,290.468107612722,327.732097558307,223.631899376614,178.753528287889,147.418605795976,232.317674309515,181.966758352145,191.161800613913,213.413791220805,214.024504628011,163.670304204555,212.142953437495,212.202074034486,154.459917750903,228.636285383636,253.440698352218,208.935668606322,187.673845816344,216.1789723247,181.649410391068,194.354863406986,212.179091365113,152.212176639081,255.43530722713,239.381967189361,186.120229395219,213.759557805936,208.663594381846,145.583330550413,0,2.18455444504853,0,9.81479511902967,1.20118796110804,1.14950487990897,5.94940385506376,1.90810750907073,1.1384259382189,4.69789751496751,2.29363936875137,9.25199300053181,30.8279709639845,14.4861246626292,0.983548850569165,0.786021525498329,1.23360899399706,0,0,0,0,0.668462741311041,0.589211814949674,0,0.541607727530031,0,0.390178042679635,3.94650971048823,4.42160028457357,6.0858648004361,4.30031033169975,1.87278579662799,3.1360657141493,0.226618685395132,1.53288197440768,1.37450978193052,1.01207876807801,10.5126586726952,7.81300144627702,7.60361635558699,11.1425588117552,6.65530378002976,8.74515085866421,14.443412374685,8.21127996921047,0.201606743224732,0.267440195783507,0,0,0.670700859703636,0.255725123687061,0,0,0,0,0,0,0,0.43917392846563,1.96468613246569,0,0,15.2537275017701,17.0647142553282,33.6383640112729,8.58566247499231,10.8679033048224,4.08603251462521,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0,63.2546003693104,89.1894607541148,0,0,0,0,0,1.77334191099179,0.560677600142307,0,0,0.933633106199299,0.134710672069688,0.490385709340376,0,0,0,0,0,0,0,0,0,0,0,0.103325781175765,0,0,0,0,0,0,0,0,0,0.150238058906597,0,0,0,0,0,0,0,0,0,0,0,0,0.323292113637624,0,0,0,0,0,0,0.243947412259191,0,0.116193942869518,0,0,0.36497735907583,0,0,0,0.464367928031979,0,0,0,0,0,0,0,0.134831308160164,0,0,0,0,0,1.47008711385542,1.26755034821831,3.9313088667105,0.590789906681404,0.441463099414651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,33.9779468400608,24.57044783962,52.3181691256323,0,0,0,0,0,0,0,0,0,0.288239906833923,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,3.7983512377401,0,0,0,0,0,0,0,47.4332744500643,41.1850814974344,63.2501818449095,0,0,0,0,0,0,0,7.29013812747131,1.94064817373566,10.0107568298204,0,0,0,0,0,104.111976328658,149.580729602012,111.063357600858,0.24538298343828,0,0,0,0,0,0,0,0,1.03473071292505,0,0,0,0,0,49.8310942956159,97.7185329708334,68.4123645520078,0,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0,0,0,0,0.114814448164607,0,0.524497659837696,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438519753291869,1.5686127061494,0,0,0,2.36994326789761,0,0,0,0,0,0,0,0,0,0.644521469209642,0.290033387828457,0.852266274161009,0.178064071293475,0,0,0,0,0,0,0,0,0,0,0,0.143124886741991,0,0,0,0.255897791311334,0.42793898803392,0,0,0.179872457583315,0,0.117812402345686,0,0,0.842516912477962,0,0,0,0,0.141405431953713,0,0,0,0,0,1.31178950409327,0,1.8589409885985,0,0.143411352204052,0.294747123039363,0,0,0.211107635297664,0,0.379473173765715,0,0,2.01090682660736,0,3.20088922641049,0,0,0,0,85.2511983510044,85.639367199946,116.208026183529,49.3139775197623,58.8248050513258,96.6225233677149,86.4050299580984,91.2093952738411,0,0,0,4.27347302789153,0,0,0,8.18275422874548,20.1080638638985,5.92686031626872,5.843194924942,5.05434920604226,11.1834992726264,9.24411385060837,27.5697924799074,2.03150133361924,1.2847046008296,17.5565745256211,40.8812388182713,36.0680611993553,4.30137070031841,3.35514161838624,3.33698283423817,40.6407238436244,0,0,0,0,0,0,2.19762268907841,0,0,0,0,4.75143489332222,0,0.994147647766298,1.96937182974718,0,0,0,1.39473591775749,1.93398740871803,0,0.102268682502155,1.23084805461069,0,0,0,12.2777368854449,0.789147245095469,170.032995566327,0,1.93866549219044,1.94813006139888,0,0,0,2.17499872630438,0,0,0,0,0.291604613383254,0,2.65722415744152,2.29133233388275,0,0.442317039724898,1.47773809476774,0.438770794307945,0,0,0.923403102045565,0,0,0,0,1.27600463892768,0.0915975934018623,0.533034776018635,1.02193298195737,4.86638794824577,3.15802195610297,0,0,0,0,1.27149263184303,0,0,0,0,0,1.06149077404007,1.83309043480088,3.55825354416746,5.68394119153913,6.26531697032732,3.50485891499521,2.40773294189637,2.10838001152805,0,0,0,0,2.41981432097328,0.61214552326098,11.4367709127563,0.150323419414493,0,0,0,0,0,0,0,0,0,0,3.4945333648406,0,0,0,0,0.581934098930517,0,1.35588444468319,0,0.19871461170299,0.886351143382302,0,0.0801588202515337,1.49417096317547,0,0,0,0.343189995723929,0,0,0,0,0,0,0,4.20294202096853,3.559539851191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| ||
|short_description=p1@C19orf38 | |short_description=p1@C19orf38 | ||
}} | }} |
Latest revision as of 03:16, 25 September 2015
Short description: | p1@C19orf38 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_C19orf38_5end |
Coexpression cluster: | C26_Eosinophils_Neutrophils_CD14_CD14CD16_Basophils_Monocytederived_Whole |
Association with transcript: | 0bp_to_ENST00000397820, NM_001136482, uc010dxm.1_5end |
EntrezGene: | C19orf38 |
HGNC: | 34073 |
UniProt: | A8MVS5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic stem cell | 3.39e-57 | 168 |
hematopoietic cell | 1.24e-55 | 177 |
myeloid leukocyte | 7.04e-54 | 72 |
hematopoietic oligopotent progenitor cell | 5.70e-53 | 161 |
hematopoietic multipotent progenitor cell | 5.70e-53 | 161 |
monopoietic cell | 2.11e-52 | 59 |
monocyte | 2.11e-52 | 59 |
monoblast | 2.11e-52 | 59 |
promonocyte | 2.11e-52 | 59 |
myeloid cell | 3.95e-52 | 108 |
common myeloid progenitor | 3.95e-52 | 108 |
macrophage dendritic cell progenitor | 7.53e-50 | 61 |
leukocyte | 1.01e-49 | 136 |
nongranular leukocyte | 8.03e-49 | 115 |
defensive cell | 9.70e-49 | 48 |
phagocyte | 9.70e-49 | 48 |
myeloid lineage restricted progenitor cell | 1.58e-45 | 66 |
granulocyte monocyte progenitor cell | 6.30e-45 | 67 |
classical monocyte | 1.04e-43 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.04e-43 | 42 |
hematopoietic lineage restricted progenitor cell | 1.12e-40 | 120 |
intermediate monocyte | 3.40e-10 | 9 |
CD14-positive, CD16-positive monocyte | 3.40e-10 | 9 |
mesenchymal cell | 1.36e-09 | 354 |
connective tissue cell | 8.68e-09 | 361 |
granulocyte | 1.54e-08 | 8 |
blood cell | 7.99e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 3.38e-52 | 98 |
blood island | 3.38e-52 | 98 |
hemolymphoid system | 6.90e-47 | 108 |
bone marrow | 3.04e-38 | 76 |
immune system | 7.36e-35 | 93 |
bone element | 1.31e-33 | 82 |
skeletal element | 1.91e-28 | 90 |
skeletal system | 3.10e-23 | 100 |
lateral plate mesoderm | 6.23e-18 | 203 |
adult organism | 3.44e-16 | 114 |
blood | 2.51e-13 | 15 |
haemolymphatic fluid | 2.51e-13 | 15 |
organism substance | 2.51e-13 | 15 |
musculoskeletal system | 2.47e-08 | 167 |
connective tissue | 4.96e-08 | 371 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 3.48e-07 | 31 |