FFCP PHASE1:Hg19::chr1:101704930..101704945,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr1:101704930..101704945,+ to FFCP PHASE1:Hg19::chr1:101704930..101704945,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=1901 | |EntrezGene=1901 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=3165 | |HGNC=3165 | ||
|TSSclassifier=strong | |||
|UniProt=P21453 | |UniProt=P21453 | ||
|association_with_transcript=389bp_to_AF022137,AF233365,CR541786,CR542269_5end | |||
|cluster_id=chr1:101704930..101704945,+ | |||
|description=CAGE_peak_11_at_S1PR1_5end | |||
|id=chr1:101704930..101704945,+ | |||
|ontology_enrichment_celltype=CL:0000791!9.82e-19!18;CL:0000789!9.82e-19!18;CL:0002420!9.82e-19!18;CL:0002419!9.82e-19!18;CL:0000790!9.82e-19!18;CL:0000084!1.77e-16!25;CL:0000827!1.77e-16!25;CL:0002139!7.72e-15!24;CL:0000625!9.63e-15!11;CL:0000115!1.52e-12!35;CL:0000071!4.43e-11!18;CL:0002546!4.43e-11!18;CL:0000838!1.27e-10!52;CL:0000542!2.92e-10!53;CL:0000051!2.92e-10!53;CL:0002078!1.92e-09!44;CL:0002087!7.25e-08!119;CL:0000738!1.91e-07!140;CL:0000624!3.83e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0000625;1.80e-34;11!CL:0000791;5.69e-29;18!CL:0000789;5.69e-29;18!CL:0002419;5.69e-29;18!CL:0000084;4.24e-20;25!CL:0002139;9.29e-14;24!CL:0000623;1.91e-12;3!CL:0000071;3.32e-12;18!CL:0002144;4.37e-12;3!CL:0000115;6.78e-09;36!CL:0000542;3.13e-08;53!CL:1000413;6.87e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000625,1.10e-34,11;CL:0000791,3.72e-29,18;CL:0000789,3.72e-29,18;CL:0002420,3.72e-29,18;CL:0002419,3.72e-29,18;CL:0000790,3.72e-29,18;CL:0000084,3.14e-20,25;CL:0000827,3.14e-20,25;CL:0000838,1.81e-15,52;CL:0000542,4.19e-15,53;CL:0000051,4.19e-15,53;CL:0002139,9.64e-14,24;CL:0000623,1.81e-12,3;CL:0000825,1.81e-12,3;CL:0000071,3.29e-12,18;CL:0002546,3.29e-12,18;CL:0002144,3.50e-12,3;CL:0000115,2.49e-10,36;CL:0002078,7.75e-08,45;CL:0002087,1.57e-07,115;CL:1000413,8.02e-07,9 | |||
|ontology_enrichment_development_v019=CL:0000790;5.69e-29;18!CL:0002546;3.32e-12;18!CL:0000051;3.13e-08;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!7.23e-19!115;UBERON:0000178!3.32e-12!15;UBERON:0000179!3.32e-12!15;UBERON:0000463!3.32e-12!15;UBERON:0001986!4.43e-11!18;UBERON:0004638!4.43e-11!18;UBERON:0004852!4.43e-11!18;UBERON:0001009!8.80e-09!113;UBERON:0000487!2.80e-08!22;UBERON:0004535!3.86e-08!110;UBERON:0006914!8.44e-07!25 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.87e-15;15!UBERON:0000179;1.87e-15;15!UBERON:0000463;1.87e-15;15!UBERON:0004638;3.32e-12;18!UBERON:0001986;3.32e-12;18!UBERON:0004852;3.32e-12;18!UBERON:0010523;4.37e-12;3!UBERON:0001915;4.37e-12;3!UBERON:0001982;4.37e-12;3!UBERON:0000487;9.45e-10;22!UBERON:0006914;1.99e-08;25!UBERON:0003915;6.87e-07;9!UBERON:0004700;6.87e-07;9!UBERON:0001917;6.87e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,1.50e-15,15;UBERON:0000179,1.50e-15,15;UBERON:0000463,1.50e-15,15;UBERON:0004638,3.29e-12,18;UBERON:0001986,3.29e-12,18;UBERON:0004852,3.29e-12,18;UBERON:0010523,3.50e-12,3;UBERON:0001915,3.50e-12,3;UBERON:0001982,3.50e-12,3;UBERON:0000487,9.38e-10,22;UBERON:0006914,1.98e-08,25;UBERON:0004535,3.71e-08,109;UBERON:0001009,7.94e-08,112;UBERON:0003915,8.02e-07,9;UBERON:0004700,8.02e-07,9;UBERON:0001917,8.02e-07,9 | |||
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| ||
|short_description=p11@S1PR1 | |||
}} | }} |
Latest revision as of 05:37, 25 September 2015
Short description: | p11@S1PR1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_11_at_S1PR1_5end |
Coexpression cluster: | NA |
Association with transcript: | 389bp_to_AF022137, AF233365, CR541786, CR542269_5end |
EntrezGene: | S1PR1 |
HGNC: | 3165 |
UniProt: | P21453 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD8-positive, alpha-beta T cell | 1.10e-34 | 11 |
mature alpha-beta T cell | 3.72e-29 | 18 |
alpha-beta T cell | 3.72e-29 | 18 |
immature T cell | 3.72e-29 | 18 |
mature T cell | 3.72e-29 | 18 |
immature alpha-beta T cell | 3.72e-29 | 18 |
T cell | 3.14e-20 | 25 |
pro-T cell | 3.14e-20 | 25 |
lymphoid lineage restricted progenitor cell | 1.81e-15 | 52 |
lymphocyte | 4.19e-15 | 53 |
common lymphoid progenitor | 4.19e-15 | 53 |
endothelial cell of vascular tree | 9.64e-14 | 24 |
natural killer cell | 1.81e-12 | 3 |
pro-NK cell | 1.81e-12 | 3 |
blood vessel endothelial cell | 3.29e-12 | 18 |
embryonic blood vessel endothelial progenitor cell | 3.29e-12 | 18 |
capillary endothelial cell | 3.50e-12 | 3 |
endothelial cell | 2.49e-10 | 36 |
meso-epithelial cell | 7.75e-08 | 45 |
nongranular leukocyte | 1.57e-07 | 115 |
endothelial cell of artery | 8.02e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
blood | 1.50e-15 | 15 |
haemolymphatic fluid | 1.50e-15 | 15 |
organism substance | 1.50e-15 | 15 |
blood vessel endothelium | 3.29e-12 | 18 |
endothelium | 3.29e-12 | 18 |
cardiovascular system endothelium | 3.29e-12 | 18 |
microcirculatory vessel | 3.50e-12 | 3 |
endothelium of capillary | 3.50e-12 | 3 |
capillary | 3.50e-12 | 3 |
simple squamous epithelium | 9.38e-10 | 22 |
squamous epithelium | 1.98e-08 | 25 |
cardiovascular system | 3.71e-08 | 109 |
circulatory system | 7.94e-08 | 112 |
endothelial tube | 8.02e-07 | 9 |
arterial system endothelium | 8.02e-07 | 9 |
endothelium of artery | 8.02e-07 | 9 |