FFCP PHASE1:Hg19::chr8:114449751..114449769,-: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=114788 | |EntrezGene=114788 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19291 | |HGNC=19291 | ||
|TSSclassifier=strong | |||
|UniProt=Q7Z407 | |UniProt=Q7Z407 | ||
|association_with_transcript=-423bp_to_ENST00000297405_5end | |||
|cluster_id=chr8:114449751..114449769,- | |||
|coexpression_cluster_id=C215 | |||
|description=CAGE_peak_7_at_CSMD3_5end | |||
|id=chr8:114449751..114449769,- | |||
|ontology_enrichment_celltype=CL:0002553!1.21e-09!1 | |||
|ontology_enrichment_celltype_v019=CL:0000138;2.74e-12;6!CL:0000153;1.21e-08;9!CL:0000447;1.21e-08;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000058,2.74e-12,6;CL:0000138,2.74e-12,6;CL:0000153,1.21e-08,9;CL:0000447,1.21e-08,9 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:3371!9.44e-10!1;DOID:4549!9.44e-10!1;DOID:5861!9.44e-10!1;DOID:6496!9.44e-10!1;DOID:225!5.28e-09!1;DOID:1115!9.41e-07!20 | |||
|ontology_enrichment_disease_v019=DOID:3371;4.66e-66;1!DOID:4549;4.66e-66;1!DOID:5861;4.66e-66;1!DOID:6496;4.66e-66;1!DOID:201;2.74e-12;6!DOID:0060100;2.74e-12;6!DOID:1036;1.24e-09;8!DOID:8692;2.68e-09;31 | |||
|ontology_enrichment_disease_v019_2=DOID:3371,4.66e-66,1;DOID:4549,4.66e-66,1;DOID:5861,4.66e-66,1;DOID:6496,4.66e-66,1;DOID:201,2.74e-12,6;DOID:0060100,2.74e-12,6;DOID:8692,1.15e-09,31;DOID:1036,1.24e-09,8;DOID:1240,6.60e-08,39 | |||
|ontology_enrichment_uberon=UBERON:0001869!3.85e-22!32;UBERON:0001893!8.65e-21!34;UBERON:0001950!1.35e-17!20;UBERON:0002791!2.34e-17!33;UBERON:0002780!4.54e-17!41;UBERON:0001890!4.54e-17!41;UBERON:0006240!4.54e-17!41;UBERON:0002020!7.96e-17!34;UBERON:0003528!7.96e-17!34;UBERON:0003080!1.23e-16!42;UBERON:0002619!5.29e-16!22;UBERON:0000956!4.51e-14!25;UBERON:0000203!4.51e-14!25;UBERON:0003056!1.68e-13!61;UBERON:0000200!3.25e-12!6;UBERON:0001049!6.21e-12!57;UBERON:0005068!6.21e-12!57;UBERON:0006241!6.21e-12!57;UBERON:0007135!6.21e-12!57;UBERON:0002616!1.75e-11!59;UBERON:0002771!3.01e-11!3;UBERON:0003075!5.54e-11!86;UBERON:0007284!5.54e-11!86;UBERON:0002346!2.07e-10!90;UBERON:0000955!1.83e-09!69;UBERON:0006238!1.83e-09!69;UBERON:0001874!3.25e-09!1;UBERON:0007190!3.53e-09!1;UBERON:0001882!4.15e-09!1;UBERON:0005403!4.15e-09!1;UBERON:0005743!5.59e-09!86;UBERON:0000369!9.25e-09!4;UBERON:0002435!9.25e-09!4;UBERON:0000204!9.25e-09!4;UBERON:0010082!9.25e-09!4;UBERON:0000073!5.59e-08!94;UBERON:0001016!5.59e-08!94;UBERON:0001017!9.27e-08!82;UBERON:0002021!2.68e-07!5;UBERON:0001872!2.94e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0002418;4.09e-23;3!UBERON:0004755;4.09e-23;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002418,4.09e-23,3;UBERON:0004755,4.09e-23,3 | |||
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|short_description=p7@CSMD3 | |||
}} | }} |
Latest revision as of 05:44, 25 September 2015
Short description: | p7@CSMD3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_CSMD3_5end |
Coexpression cluster: | C215_chronic_acute_peripheral_Hepatocyte_osteosarcoma_NK_immature |
Association with transcript: | -423bp_to_ENST00000297405_5end |
EntrezGene: | CSMD3 |
HGNC: | 19291 |
UniProt: | Q7Z407 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chondroblast | 2.74e-12 | 6 |
chondrocyte | 2.74e-12 | 6 |
GAG secreting cell | 1.21e-08 | 9 |
carbohydrate secreting cell | 1.21e-08 | 9 |
Ontology term | p-value | n |
---|---|---|
cartilage tissue | 4.09e-23 | 3 |
skeletal tissue | 4.09e-23 | 3 |
Ontology term | p-value | n |
---|---|---|
chondrosarcoma | 4.66e-66 | 1 |
extraosseous chondrosarcoma | 4.66e-66 | 1 |
myxoid chondrosarcoma | 4.66e-66 | 1 |
extraskeletal myxoid chondrosarcoma | 4.66e-66 | 1 |
connective tissue cancer | 2.74e-12 | 6 |
musculoskeletal system cancer | 2.74e-12 | 6 |
myeloid leukemia | 1.15e-09 | 31 |
chronic leukemia | 1.24e-09 | 8 |
leukemia | 6.60e-08 | 39 |