FFCP PHASE1:Hg19::chr16:230435..230499,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr16:230435..230499,+
|short_description=p1@HBQ1
|description=CAGE_peak_1_at_HBQ1_5end
|association_with_transcript=0bp_to_ENST00000199708_5end
|EntrezGene=30...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=3049 | |EntrezGene=3049 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4833 | |HGNC=4833 | ||
|TSSclassifier=strong | |||
|UniProt=P09105 | |UniProt=P09105 | ||
|association_with_transcript=0bp_to_ENST00000199708_5end | |||
|cluster_id=chr16:230435..230499,+ | |||
|coexpression_cluster_id=C14 | |||
|description=CAGE_peak_1_at_HBQ1_5end | |||
|id=chr16:230435..230499,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:8692!9.63e-07!31 | |||
|ontology_enrichment_disease_v019=DOID:1036;6.75e-10;8!DOID:8692;1.40e-09;31 | |||
|ontology_enrichment_disease_v019_2=DOID:1036,6.66e-10,8;DOID:8692,8.08e-10,31;DOID:1240,6.73e-08,39 | |||
|ontology_enrichment_uberon=UBERON:0002346!3.09e-13!90;UBERON:0003075!3.12e-12!86;UBERON:0007284!3.12e-12!86;UBERON:0001869!2.69e-11!32;UBERON:0001893!1.13e-10!34;UBERON:0000073!1.31e-10!94;UBERON:0001016!1.31e-10!94;UBERON:0000119!1.40e-10!312;UBERON:0003056!1.94e-10!61;UBERON:0000153!2.52e-10!129;UBERON:0007811!2.52e-10!129;UBERON:0000483!2.60e-10!309;UBERON:0005743!2.76e-10!86;UBERON:0002020!3.40e-10!34;UBERON:0003528!3.40e-10!34;UBERON:0002791!3.87e-10!33;UBERON:0000033!4.39e-10!123;UBERON:0001017!7.45e-10!82;UBERON:0002619!1.01e-09!22;UBERON:0000178!1.06e-09!15;UBERON:0000179!1.06e-09!15;UBERON:0000463!1.06e-09!15;UBERON:0000956!2.41e-09!25;UBERON:0000203!2.41e-09!25;UBERON:0000924!2.80e-09!173;UBERON:0006601!2.80e-09!173;UBERON:0000955!4.67e-09!69;UBERON:0006238!4.67e-09!69;UBERON:0001950!7.42e-09!20;UBERON:0002616!1.32e-08!59;UBERON:0004121!1.63e-08!169;UBERON:0001049!2.21e-08!57;UBERON:0005068!2.21e-08!57;UBERON:0006241!2.21e-08!57;UBERON:0007135!2.21e-08!57;UBERON:0002780!3.27e-08!41;UBERON:0001890!3.27e-08!41;UBERON:0006240!3.27e-08!41;UBERON:0003080!9.12e-08!42;UBERON:0007023!8.52e-07!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;8.90e-12;15!UBERON:0000179;8.90e-12;15!UBERON:0000463;8.90e-12;15!UBERON:0002619;5.19e-10;22!UBERON:0001950;1.10e-09;20!UBERON:0001869;1.52e-09;32!UBERON:0002791;9.04e-09;32!UBERON:0001893;1.78e-08;34!UBERON:0000956;2.08e-08;25!UBERON:0000203;2.08e-08;25!UBERON:0003528;1.50e-07;34!UBERON:0002020;1.50e-07;34 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,8.29e-12,15;UBERON:0000179,8.29e-12,15;UBERON:0000463,8.29e-12,15;UBERON:0001869,1.98e-10,32;UBERON:0002619,5.05e-10,22;UBERON:0001950,1.09e-09,20;UBERON:0001893,1.54e-09,34;UBERON:0002791,3.66e-09,32;UBERON:0000956,2.03e-08,25;UBERON:0000203,2.03e-08,25;UBERON:0003528,2.27e-08,34;UBERON:0002020,2.27e-08,34;UBERON:0001016,7.78e-08,89;UBERON:0003056,3.30e-07,61;UBERON:0002780,3.91e-07,41;UBERON:0001890,3.91e-07,41;UBERON:0003080,3.91e-07,41;UBERON:0006240,3.91e-07,41;UBERON:0001017,6.65e-07,81 | |||
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| ||
|short_description=p1@HBQ1 | |||
}} | }} |
Latest revision as of 05:47, 25 September 2015
Short description: | p1@HBQ1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_HBQ1_5end |
Coexpression cluster: | C14_Whole_blood_Reticulocytes_liver_Neutrophils_Eosinophils_spleen |
Association with transcript: | 0bp_to_ENST00000199708_5end |
EntrezGene: | HBQ1 |
HGNC: | 4833 |
UniProt: | P09105 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
blood | 8.29e-12 | 15 |
haemolymphatic fluid | 8.29e-12 | 15 |
organism substance | 8.29e-12 | 15 |
cerebral hemisphere | 1.98e-10 | 32 |
regional part of cerebral cortex | 5.05e-10 | 22 |
neocortex | 1.09e-09 | 20 |
telencephalon | 1.54e-09 | 34 |
regional part of telencephalon | 3.66e-09 | 32 |
cerebral cortex | 2.03e-08 | 25 |
pallium | 2.03e-08 | 25 |
brain grey matter | 2.27e-08 | 34 |
gray matter | 2.27e-08 | 34 |
nervous system | 7.78e-08 | 89 |
pre-chordal neural plate | 3.30e-07 | 61 |
regional part of forebrain | 3.91e-07 | 41 |
forebrain | 3.91e-07 | 41 |
anterior neural tube | 3.91e-07 | 41 |
future forebrain | 3.91e-07 | 41 |
central nervous system | 6.65e-07 | 81 |
Ontology term | p-value | n |
---|---|---|
chronic leukemia | 6.66e-10 | 8 |
myeloid leukemia | 8.08e-10 | 31 |
leukemia | 6.73e-08 | 39 |