FFCP PHASE1:Hg19::chr4:139936905..139936944,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=25819 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14254 | |||
|TSSclassifier=strong | |||
|UniProt=Q9UK39,Q8WTX0 | |||
|association_with_transcript=0bp_to_ENST00000280614,NM_012118,uc003ihk.1,uc003ihl.2_5end | |||
|cluster_id=chr4:139936905..139936944,+ | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_1_at_CCRN4L_5end | |||
|id=chr4:139936905..139936944,+ | |||
|ontology_enrichment_celltype=CL:0000012!5.90e-27!682;CL:0000548!1.18e-25!679;CL:0000004!1.18e-25!679;CL:0000255!1.18e-25!679;CL:0000144!3.86e-22!625;CL:0002057!1.53e-17!42;CL:0000063!2.26e-15!578;CL:0000860!4.74e-15!45;CL:0002371!1.63e-14!591;CL:0000763!2.00e-12!112;CL:0000049!2.00e-12!112;CL:0000003!2.69e-12!722;CL:0000557!2.79e-10!71;CL:0002009!2.16e-09!65;CL:0000766!4.14e-09!76;CL:0000839!1.05e-08!70;CL:0002194!1.15e-08!63;CL:0000576!1.15e-08!63;CL:0000040!1.15e-08!63;CL:0000559!1.15e-08!63;CL:0000988!8.14e-08!182;CL:0000034!3.28e-07!444;CL:0000037!6.48e-07!172;CL:0000566!6.48e-07!172 | |||
|ontology_enrichment_celltype_v019=CL:0000860;5.59e-13;33!CL:0002057;5.59e-13;33!CL:0000576;3.39e-09;48!CL:0000473;2.35e-07;39!CL:0000234;2.35e-07;39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.53e-17,42;CL:0002057,1.53e-17,42;CL:0000763,7.85e-14,108;CL:0000049,7.85e-14,108;CL:0000473,2.30e-12,48;CL:0000234,2.30e-12,48;CL:0000557,5.98e-12,67;CL:0002009,4.71e-11,61;CL:0000766,1.44e-10,72;CL:0002194,2.90e-10,59;CL:0000576,2.90e-10,59;CL:0000040,2.90e-10,59;CL:0000559,2.90e-10,59;CL:0000839,3.37e-10,66;CL:0000988,1.57e-08,177;CL:0000037,1.20e-07,168;CL:0000034,2.36e-07,441;CL:0002032,3.50e-07,161;CL:0000837,3.50e-07,161 | |||
|ontology_enrichment_development_v019=CL:0002057;8.31e-13;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003081!2.59e-09!216;UBERON:0002371!1.79e-08!80;UBERON:0001474!3.89e-08!86;UBERON:0002049!4.84e-07!79;UBERON:0007798!4.84e-07!79 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,8.24e-10,76;UBERON:0001474,2.24e-09,82;UBERON:0003081,7.40e-09,203;UBERON:0002405,1.47e-07,93;UBERON:0004765,1.96e-07,90;UBERON:0002049,3.09e-07,78;UBERON:0007798,3.09e-07,78 | |||
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| |||
|short_description=p1@CCRN4L | |||
}} |
Latest revision as of 06:32, 25 September 2015
Short description: | p1@CCRN4L |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CCRN4L_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | 0bp_to_ENST00000280614, NM_012118, uc003ihk.1, uc003ihl.2_5end |
EntrezGene: | CCRN4L |
HGNC: | 14254 |
UniProt: | Q9UK39Q8WTX0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.53e-17 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.53e-17 | 42 |
myeloid cell | 7.85e-14 | 108 |
common myeloid progenitor | 7.85e-14 | 108 |
defensive cell | 2.30e-12 | 48 |
phagocyte | 2.30e-12 | 48 |
granulocyte monocyte progenitor cell | 5.98e-12 | 67 |
macrophage dendritic cell progenitor | 4.71e-11 | 61 |
myeloid leukocyte | 1.44e-10 | 72 |
monopoietic cell | 2.90e-10 | 59 |
monocyte | 2.90e-10 | 59 |
monoblast | 2.90e-10 | 59 |
promonocyte | 2.90e-10 | 59 |
myeloid lineage restricted progenitor cell | 3.37e-10 | 66 |
hematopoietic cell | 1.57e-08 | 177 |
hematopoietic stem cell | 1.20e-07 | 168 |
stem cell | 2.36e-07 | 441 |
hematopoietic oligopotent progenitor cell | 3.50e-07 | 161 |
hematopoietic multipotent progenitor cell | 3.50e-07 | 161 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 8.24e-10 | 76 |
bone element | 2.24e-09 | 82 |
lateral plate mesoderm | 7.40e-09 | 203 |
immune system | 1.47e-07 | 93 |
skeletal element | 1.96e-07 | 90 |
vasculature | 3.09e-07 | 78 |
vascular system | 3.09e-07 | 78 |