FFCP PHASE2:Hg19::chr19:11925071..11925113,+: Difference between revisions
From FANTOM5_SSTAR
Jump to: navigation, search
(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:126070 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding |HGNC=HGNC:20874 |TSScl...") |
No edit summary |
||
| Line 2: | Line 2: | ||
|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=126070 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=20874 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=Q8IYI8,C9JG89 | ||
|association_with_transcript=0bp_to_ENST00000304060,ENST00000457526,NM_152357,uc002msp.1_5end | |association_with_transcript=0bp_to_ENST00000304060,ENST00000457526,NM_152357,uc002msp.1_5end | ||
|cluster_id=chr19:11925071..11925113,+ | |cluster_id=chr19:11925071..11925113,+ | ||
Latest revision as of 06:52, 25 September 2015
| Short description: | p1@ZNF440 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_1_at_ZNF440_5end |
| Coexpression cluster: | NA |
| Association with transcript: | 0bp_to_ENST00000304060, ENST00000457526, NM_152357, uc002msp.1_5end |
| EntrezGene: | ZNF440 |
| HGNC: | 20874 |
| UniProt: | Q8IYI8C9JG89 |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p1@ZNF440 |
|---|
0
20
40
60
80
100
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| adult organism | 4.36e-23 | 114 |
| central nervous system | 3.39e-13 | 81 |
| nervous system | 4.13e-12 | 89 |
| neural tube | 7.68e-12 | 56 |
| neural rod | 7.68e-12 | 56 |
| future spinal cord | 7.68e-12 | 56 |
| neural keel | 7.68e-12 | 56 |
| regional part of nervous system | 3.27e-11 | 53 |
| regional part of brain | 3.27e-11 | 53 |
| brain | 9.98e-11 | 68 |
Showing 1 to 10 of 20 entries
