FFCP PHASE1:Hg19::chr4:140478036..140478062,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr4:140478036..140478062,-
|short_description=p8@SETD7
|description=CAGE_peak_8_at_SETD7_5end
|association_with_transcript=-108bp_to_ENST00000274031_5end
|Ent...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=80854 | |EntrezGene=80854 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30412 | |HGNC=30412 | ||
|TSSclassifier=strong | |||
|UniProt=Q8WTS6 | |UniProt=Q8WTS6 | ||
|association_with_transcript=-108bp_to_ENST00000274031_5end | |||
|cluster_id=chr4:140478036..140478062,- | |||
|coexpression_cluster_id=C23 | |||
|description=CAGE_peak_8_at_SETD7_5end | |||
|id=chr4:140478036..140478062,- | |||
|ontology_enrichment_celltype=CL:0000542!4.71e-12!53;CL:0000051!4.71e-12!53;CL:0000838!1.22e-11!52;CL:0000791!6.70e-10!18;CL:0000789!6.70e-10!18;CL:0002420!6.70e-10!18;CL:0002419!6.70e-10!18;CL:0000790!6.70e-10!18;CL:0000624!3.79e-07!6;CL:0000084!6.83e-07!25;CL:0000827!6.83e-07!25 | |||
|ontology_enrichment_celltype_v019=CL:0000624;1.11e-29;6!CL:0000791;1.88e-25;18!CL:0000789;1.88e-25;18!CL:0002419;1.88e-25;18!CL:0000084;8.67e-18;25!CL:0000542;3.60e-16;53!CL:0000898;1.08e-15;3!CL:0000236;4.67e-13;13!CL:0000815;2.11e-11;2!CL:0000792;2.11e-11;2!CL:0002677;2.11e-11;2!CL:0000623;3.64e-07;3!CL:0000625;4.09e-07;11!CL:0000945;8.69e-07;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0000624,4.09e-30,6;CL:0000838,1.80e-26,52;CL:0000542,6.82e-26,53;CL:0000051,6.82e-26,53;CL:0000791,1.12e-25,18;CL:0000789,1.12e-25,18;CL:0002420,1.12e-25,18;CL:0002419,1.12e-25,18;CL:0000790,1.12e-25,18;CL:0000084,6.01e-18,25;CL:0000827,6.01e-18,25;CL:0000898,6.96e-16,3;CL:0002087,3.39e-12,115;CL:0000236,3.90e-12,14;CL:0000815,1.91e-11,2;CL:0000792,1.91e-11,2;CL:0002677,1.91e-11,2;CL:0002031,3.04e-10,120;CL:0000738,1.20e-09,136;CL:0000623,2.41e-07,3;CL:0000825,2.41e-07,3;CL:0000625,4.14e-07,11;CL:0000037,5.23e-07,168;CL:0000945,8.11e-07,24;CL:0000826,8.11e-07,24 | |||
|ontology_enrichment_development_v019=CL:0000790;1.88e-25;18!CL:0000051;3.60e-16;53!UBERON:0006215;9.10e-16;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!5.08e-17!115;UBERON:0001049!5.40e-12!57;UBERON:0005068!5.40e-12!57;UBERON:0006241!5.40e-12!57;UBERON:0007135!5.40e-12!57;UBERON:0002616!2.41e-10!59;UBERON:0000073!4.16e-10!94;UBERON:0001016!4.16e-10!94;UBERON:0002780!4.41e-10!41;UBERON:0001890!4.41e-10!41;UBERON:0006240!4.41e-10!41;UBERON:0001869!6.75e-10!32;UBERON:0001017!7.09e-10!82;UBERON:0001893!8.74e-10!34;UBERON:0003080!1.32e-09!42;UBERON:0002020!1.63e-09!34;UBERON:0003528!1.63e-09!34;UBERON:0000955!1.65e-09!69;UBERON:0006238!1.65e-09!69;UBERON:0005743!2.48e-09!86;UBERON:0002791!2.80e-09!33;UBERON:0002619!9.55e-08!22;UBERON:0000956!7.82e-07!25;UBERON:0000203!7.82e-07!25;UBERON:0001950!9.00e-07!20 | |||
|ontology_enrichment_uberon_v019=UBERON:0002037;4.17e-08;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002037,4.76e-08,6;UBERON:0006215,4.76e-08,6 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0,0,0,0,0.786728553697808,0.383829398097213,0.77408061658038,0,0,0,0.619737604642413,0.568676929949686,0.880801318004542,0.553995408531877,0.601633342410425,1.08505435357926,0,0,0,0.145398238779565,0,0,0,0,0.309706370895104,0.28769239232215,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290209238628584,0,0,0,0,0,0,0,0.316462387440884,0,0,0,0.112328631146495,0,0,0,0.19891667719909,0.365328307529268,0,2.73069305631066,0,1.28019066769952,0.400395987036012,0.574752439954483,1.32208974556972,0,3.41527781465669,2.34894875748376,2.6759125968766,0,1.12101712596307,0.263384084775077,1.96709770113833,6.6811829667358,4.72883447698871,1.00311897234407,6.8443675993054,4.73447805734733,5.84480185223734,0.445641827540694,3.82987679717288,4.65221178625604,2.70803863765016,0.768547918354051,0.650296737799391,0,0,0,0.741432815810302,1.07016331235885,1.04535523804977,0,1.53288197440768,2.74901956386104,1.01207876807801,0,0.651083453856419,0,1.05402583354441,0.511946444617674,0,0.236777252044017,0.821127996921047,3.02410114837099,1.60464117470104,1.15859523106239,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0.130979075497713,0,0,0,0,0,0.715471872916026,0.571994910780128,0.74291500265913,0.198762407366705,0,0,0,0,0,0,0,0.35576626268671,0,0,0,0.488124115096339,0,0,0.0892997282840798,0,0,0,0.949265659568129,0,0,0,0,0,0.12663051166458,0,0,0,0,0,0.24666754841716,0,0,0,0.151357427644931,0,0,0,0,0,0.23486899728753,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150238058906597,0,0.179389635688862,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132529768321485,0,0,0,0.36497735907583,0,0,0,0,0,0.118306800039844,0,0,0.330881918197182,0,0,0,0,0,0,0,0,0,0,0.982827216677626,0,0,0.122988438543114,0,0,0,0,0.0925884451585296,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0.148631162288728,0,0,0,0.0895585227028483,0,0,0,0,0,0.432359860250884,0,0,0.381988425558278,0,0,0,0,0,0,0,0,0,0,0,0.26593811658487,0,0,0,0,0,0,0,0,0.355391948742546,0,0,0,0,0,0,0,0,0,0,0,0,0,0.448340575974109,0.985153801009636,1.94064817373566,1.28343036279748,0.254094624222463,1.30139853857622,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0.117141414992713,0,0,0,0,0,0,0,0.343143423810856,1.03384013061444,0.431428401637234,0.640365346820666,0,0,0,0,0.153461973288062,0,0,0,0,0,0,0,0,0,0,0,0,0.0920809889358963,0,0,0,0,0.231046011313244,1.56869953835371,0,0,0,0.340187410553031,0,0,0,0,0,0,0,0,0,0,0,0,0.309123034943167,0.183138929636687,0.165018999841176,0.574265537996172,0,0,0.096670718292122,0,0,0,0,0,0.255679882248303,0.178064071293475,0,0.192190067365106,0.127612712494584,0.2023155617111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.655894752046633,0.202910376962704,0.30982349809975,0,0,0,0,0,0.211107635297664,0,0,0,0.0962221127255121,0,0,0.0941438007767792,0,0,0,0.229723400206959,0,0,0.569647187174163,0.238231775457789,0.411362273086194,0,0.540031437238115,0.79312517629427,0.106824071127473,0,0.245040215981032,0.371606350251437,0.577076851905779,0.142283686696828,0.159426272728822,0,0.191505370132367,0.211673582723883,0,0.280797178113459,0,0.156679895773023,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0,0,0,0.71623345421307,0,0.307160702099232,0,0.422008249231538,0,0,0,0.19924798825107,0.276283915531148,0.251932747854276,0.306806047506464,0,0,0,0.358042349351218,0,0,0,0,0,0.834912883456661,0,0,0.524759999977174,0,0.1137934482855,0.254253650292766,0.709163045303809,0,0.874813840149763,0.173624994933292,1.77148277162768,0.60298219312704,3.05163472634166,2.10100593869327,2.06883333267483,0.438770794307945,0.762569244632931,0,0.307801034015188,0,0.46112780877612,0,0.217294743844016,0,0,0,0,0,0,0,0,0,0,0,0.210998064528027,0.163232808159148,0,0.432777279484182,0,0.176915129006678,0,0,0.123563938946503,0,0.404406797884062,0,0,0.91227394607833,0,0.242780379534093,0.394584402849391,0,0.91821828489147,0.31593289814244,0,0,0.664653872707185,0.661983911750998,0.313932918407225,0,0.284609546029793,0,0,0,0,0,0,0.0967563312890851,0,0.246346371159628,0.0969890164884194,0,0.225980740780532,0.137041924646751,0,0.696418755514666,0,0.0801588202515337,0.426905989478705,0.19980960958213,0.144090417154106,0,0.171594997861965,1.00838358591705,0,0,0,0.209205692624666,0,0,0.600420288709789,0.136905378891993,0,0,0,0,0.687481272035051,0,0,0,0.223171457441873,0.268733889946905,0,0,0,0,0,0.393709926058995,0,0.795229689809303,0.272406812223151,0,0,0,0.2249738915515,0.77380195455795,0.607495566580247,0,0.0788057072991982,0.157363764404994,0.105600336519406,0.179287339332845,0,0,0,0,0,0,0,0,0,0,0,0,0,0.517131825446202,0.13223260174269,0,0,0.213574825135389,0,0,0.496166021811951,0.592834895693833,0.60896299190448,0,0.544017803369474,0,0.306345576763462,0,0.157054096250234,0,0.366078794705889,0.500763722825999,0,0.443716206147409,0.558867626472451,1.52183498429854,0,0,0,0,0,0.28984205722165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.181848659202559,0.107410557042488,0,0,0,0,0.336749488765919,0,0,0,0,0,0,0,0,0,0,0,0,0.168942440653073,0,0,0,0.553033744606923,0.1948603088393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| ||
|short_description=p8@SETD7 | |||
}} | }} |
Latest revision as of 07:18, 25 September 2015
Short description: | p8@SETD7 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_SETD7_5end |
Coexpression cluster: | C23_CD4_CD8_Natural_Peripheral_Basophils_CD19_CD14 |
Association with transcript: | -108bp_to_ENST00000274031_5end |
EntrezGene: | SETD7 |
HGNC: | 30412 |
UniProt: | Q8WTS6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD4-positive, alpha-beta T cell | 4.09e-30 | 6 |
lymphoid lineage restricted progenitor cell | 1.80e-26 | 52 |
lymphocyte | 6.82e-26 | 53 |
common lymphoid progenitor | 6.82e-26 | 53 |
mature alpha-beta T cell | 1.12e-25 | 18 |
alpha-beta T cell | 1.12e-25 | 18 |
immature T cell | 1.12e-25 | 18 |
mature T cell | 1.12e-25 | 18 |
immature alpha-beta T cell | 1.12e-25 | 18 |
T cell | 6.01e-18 | 25 |
pro-T cell | 6.01e-18 | 25 |
naive T cell | 6.96e-16 | 3 |
nongranular leukocyte | 3.39e-12 | 115 |
B cell | 3.90e-12 | 14 |
regulatory T cell | 1.91e-11 | 2 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 1.91e-11 | 2 |
naive regulatory T cell | 1.91e-11 | 2 |
hematopoietic lineage restricted progenitor cell | 3.04e-10 | 120 |
leukocyte | 1.20e-09 | 136 |
natural killer cell | 2.41e-07 | 3 |
pro-NK cell | 2.41e-07 | 3 |
CD8-positive, alpha-beta T cell | 4.14e-07 | 11 |
hematopoietic stem cell | 5.23e-07 | 168 |
lymphocyte of B lineage | 8.11e-07 | 24 |
pro-B cell | 8.11e-07 | 24 |
Ontology term | p-value | n |
---|---|---|
cerebellum | 4.76e-08 | 6 |
rhombic lip | 4.76e-08 | 6 |