FFCP PHASE1:Mm9::chr16:42955668..42955678,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=170658 | |EntrezGene=170658 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=375 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-14bp_to_NR_002445,uc007zgb.1_5end | |association_with_transcript=-14bp_to_NR_002445,uc007zgb.1_5end | ||
|cluster_id=chr16:42955668..42955678,+ | |||
|description=CAGE_peak_4_at_BC002163_5end | |description=CAGE_peak_4_at_BC002163_5end | ||
|id=chr16:42955668..42955678,+ | |id=chr16:42955668..42955678,+ | ||
|ontology_enrichment_celltype=CL:0000063!3.49e-19!66;CL:0000144!4.12e-18!121;CL:0000012!4.12e-18!121;CL:0002371!1.36e-16!118;CL:0000548!1.20e-14!115;CL:0000004!1.20e-14!115;CL:0000255!1.20e-14!115;CL:0000034!3.81e-10!97;CL:0002320!6.23e-10!46;CL:0000134!6.23e-10!46;CL:0000219!8.37e-10!54;CL:0000988!8.78e-10!32;CL:0002032!8.78e-10!32;CL:0000037!8.78e-10!32;CL:0000566!8.78e-10!32;CL:0000837!8.78e-10!32;CL:0002031!4.18e-09!25;CL:0002076!1.85e-08!15;CL:0000838!1.93e-08!12;CL:0000066!2.63e-08!25;CL:0000791!9.66e-08!9;CL:0000789!9.66e-08!9;CL:0002420!9.66e-08!9;CL:0002419!9.66e-08!9;CL:0000790!9.66e-08!9;CL:0000084!1.28e-07!11;CL:0000827!1.28e-07!11;CL:0000542!1.60e-07!13;CL:0000051!1.60e-07!13;CL:0000723!2.09e-07!91;CL:0000048!2.09e-07!91;CL:0000624!4.99e-07!8;CL:0002563!6.05e-07!9;CL:0002251!6.05e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000219,2.27e-14,54;CL:0002320,2.90e-13,46;CL:0000134,2.90e-13,46;CL:0000988,3.79e-13,32;CL:0002032,3.79e-13,32;CL:0000037,3.79e-13,32;CL:0000837,3.79e-13,32;CL:0002031,7.02e-11,25;CL:0000066,4.30e-09,25;CL:0000034,2.55e-08,97;CL:0002076,3.35e-08,15;CL:0000838,3.51e-08,12;CL:0000542,1.93e-07,13;CL:0000051,1.93e-07,13;CL:0000553,2.12e-07,6;CL:0000556,2.12e-07,6;CL:0000223,4.45e-07,20;CL:0000049,4.69e-07,19;CL:0000738,6.53e-07,17;CL:0002087,6.53e-07,17;CL:0000084,6.62e-07,11;CL:0000827,6.62e-07,11;CL:0000068,7.04e-07,3;CL:0002202,7.04e-07,3;CL:0000069,7.04e-07,3;CL:0002632,7.04e-07,3;CL:0002368,7.04e-07,3;CL:0000307,7.04e-07,3;CL:0000377,7.04e-07,3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!2.41e-10!15;UBERON:0002384!6.23e-10!46;UBERON:0001242!2.17e-08!13;UBERON:0000060!2.17e-08!13;UBERON:0001262!2.17e-08!13;UBERON:0004786!2.17e-08!13;UBERON:0003350!6.05e-07!9;UBERON:0004808!6.05e-07!9;UBERON:0001277!6.05e-07!9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,2.90e-13,46;UBERON:0000344,2.00e-10,15;UBERON:0001242,1.85e-07,13;UBERON:0001262,1.85e-07,13;UBERON:0004786,1.85e-07,13;UBERON:0003126,7.04e-07,3;UBERON:0001005,7.04e-07,3;UBERON:0007196,7.04e-07,3;UBERON:0001558,7.04e-07,3 | |||
|phase1_expression=0,0.348975407639361,0.454999239389536,3.32710632437513,7.01254021924886,1.51091344720701,2.33612640595526,2.06597317506522,0.703943610758334,0.70219357896598,2.91070545983358,2.23362045186942,3.76641605848653,1.48614684112296,0,3.64455481301687,2.79824751251259,3.47008381894061,2.87940310572051,2.54633791078818,0,0,5.22399578277871,6.39969691173627,7.11168771308227,1.72269589234506,3.01533397311352,0.430942465371778,7.60093677825496,2.52030129759931,1.55211357458713,0.635030673459631,0,0,1.1554064790051,0.166234645358492,0.408338712524738,1.25559489221072,6.2506827561904,3.14114246384279,0.588231488031014,2.73218193983378,1.45653105909346,0,0.101376931219515,0,0,0,0,0,0,1.43752564364972,3.18786951509699,0.725362142011344,2.01656279485478,0,0,0,0,0,0.633831403506179,0,0.889294796111139,0.449949858640699,0,0,0,0,0,0.135005938331691,0.210324961351382,0,0,0,0.191690942036473,0,0,0.127687338085188,0.153606533256243,0.263772575460388,0,0,0,0.56276261003168,0,0,0,0,3.71058347332602,3.6274348851257,2.6087803983151,12.0459342777394,0,0,0,0,0.140444420131752,0,4.67614808285164,6.36011234118612,1.69012103732017,1.28326477414318,0,0,5.41227602528035,5.06719730950197,6.0662933401774,0,0,0,0,0,0,0,0.117588707135705,0,0,0,0,0,0,0,0,0,0,0,1.31796636956512,1.19980546198682,2.1601938602421,0,0.457500602818626,0,0,0,0.20778804455956,0.162241263067758,0,0,0,0,0.130120442962704,0,0,0,0,0,0.187403449119458,0,0,0,0,0,0,0,0,0,0,1.28673953557358,0,0,0,0,0,0,0,0,0,0,0.16455984991348,0.164167464079095,0,0.146199987425332,0.219550115291051,0,0,0.102904612379284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216138049874694,0,0,0,0,0,0,0,0,0,0,0,0.296452627087149,0,0,0,0,0,0,0.287696137450811,0,0,0,0,0,0.252578877947112,0.179397413521912,0,0,0,0,0,0.234690248288502,0.167506257441816,0,0,0,0,0,0,0,0,0,4.35124547054968,0,0,0,0,0,0,0,0,0,0,0.445597348164788,0,0,0,0,0.321321316421807,0,0.178065603667255,0,0,1.32745138339963,0,0,0,0,0,0,0,0,0.316036757935816,0,0,0,0,0.129358683782755,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188368457004691,0.136694227721025,0,0.509935289981566,0.419854356970974,0.414599921413271,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241584120826006,0,0.316011120628178,0,0,0,0.179026695667481,0,0.120195449519969,0,0,0,0,0,0,0,0.226730383615211,4.66170502085536,3.76798197759798,4.53288464183012,0,0,0,0,0,0,0.460325236507177,0,6.53042092906013,0,0,0,0.45032120322422,0,0,0,0,0,0.243106717068294,0,0,0,0,0,0,0,0,0,0,0,0,0.115884325944855,0,0,0,0,0,0,0.145346416632329,0,0,0,0,0,0,0,0.0985044823755635,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0.348975407639361,0.454999239389536,3.32710632437513,7.01254021924886,1.51091344720701,2.33612640595526,2.06597317506522,0.703943610758334,0.70219357896598,2.91070545983358,2.23362045186942,3.76641605848653,1.48614684112296,0,3.64455481301687,2.79824751251259,3.47008381894061,2.87940310572051,2.54633791078818,0,0,5.22399578277871,6.39969691173627,7.11168771308227,1.72269589234506,3.01533397311352,0.430942465371778,7.60093677825496,2.52030129759931,1.55211357458713,0.635030673459631,0,0,1.1554064790051,0.166234645358492,0.408338712524738,1.25559489221072,6.2506827561904,3.14114246384279,0.588231488031014,2.73218193983378,1.45653105909346,0,0.101376931219515,0,0,0,0,0,0,1.43752564364972,3.18786951509699,0.725362142011344,2.01656279485478,0,0,0,0,0,0.633831403506179,0,0.889294796111139,0.449949858640699,0,0,0,0,0,0.135005938331691,0.210324961351382,0,0,0,0.191690942036473,0,0,0.127687338085188,0.153606533256243,0.263772575460388,0,0,0,0.56276261003168,0,0,0,0,3.71058347332602,3.6274348851257,2.6087803983151,12.0459342777394,0,0,0,0,0.140444420131752,0,4.67614808285164,6.36011234118612,1.69012103732017,1.28326477414318,0,0,5.41227602528035,5.06719730950197,6.0662933401774,0,0,0,0,0,0,0,0.117588707135705,0,0,0,0,0,0,0,0,0,0,0,1.31796636956512,1.19980546198682,2.1601938602421,0,0.457500602818626,0,0,0,0.20778804455956,0.162241263067758,0,0,0,0,0.130120442962704,0,0,0,0,0,0.187403449119458,0,0,0,0,0,0,0,0,0,0,1.28673953557358,0,0,0,0,0,0,0,0,0,0,0.16455984991348,0.164167464079095,0,0.146199987425332,0.219550115291051,0,0,0.102904612379284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216138049874694,0,0,0,0,0,0,0,0,0,0,0,0.296452627087149,0,0,0,0,0,0,0.287696137450811,0,0,0,0,0,0.252578877947112,0.179397413521912,0,0,0,0,0,0.234690248288502,0.167506257441816,0,0,0,0,0,0,0,0,0,4.35124547054968,0,0,0,0,0,0,0,0,0,0,0.445597348164788,0,0,0,0,0.321321316421807,0,0.178065603667255,0,0,1.32745138339963,0,0,0,0,0,0,0,0,0.316036757935816,0,0,0,0,0.129358683782755,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188368457004691,0.136694227721025,0,0.509935289981566,0.419854356970974,0.414599921413271,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241584120826006,0,0.316011120628178,0,0,0,0.179026695667481,0,0.120195449519969,0,0,0,0,0,0,0,0.226730383615211,4.66170502085536,3.76798197759798,4.53288464183012,0,0,0,0,0,0,0.460325236507177,0,6.53042092906013,0,0,0,0.45032120322422,0,0,0,0,0,0.243106717068294,0,0,0,0,0,0,0,0,0,0,0,0,0.115884325944855,0,0,0,0,0,0,0.145346416632329,0,0,0,0,0,0,0,0.0985044823755635,0,0,0,0,0,0,0,0,0 | ||
|short_description=p4@BC002163 | |short_description=p4@BC002163 | ||
}} | }} |
Latest revision as of 13:27, 25 September 2015
Short description: | p4@BC002163 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_BC002163_5end |
Coexpression cluster: | MCL_coexpression_mm9:375 |
Association with transcript: | -14bp_to_NR_002445, uc007zgb.1_5end |
EntrezGene: | BC002163 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
motile cell | 2.27e-14 | 54 |
connective tissue cell | 2.90e-13 | 46 |
mesenchymal cell | 2.90e-13 | 46 |
hematopoietic cell | 3.79e-13 | 32 |
hematopoietic oligopotent progenitor cell | 3.79e-13 | 32 |
hematopoietic stem cell | 3.79e-13 | 32 |
hematopoietic multipotent progenitor cell | 3.79e-13 | 32 |
hematopoietic lineage restricted progenitor cell | 7.02e-11 | 25 |
epithelial cell | 4.30e-09 | 25 |
stem cell | 2.55e-08 | 97 |
endo-epithelial cell | 3.35e-08 | 15 |
lymphoid lineage restricted progenitor cell | 3.51e-08 | 12 |
lymphocyte | 1.93e-07 | 13 |
common lymphoid progenitor | 1.93e-07 | 13 |
megakaryocyte progenitor cell | 2.12e-07 | 6 |
megakaryocyte | 2.12e-07 | 6 |
endodermal cell | 4.45e-07 | 20 |
common myeloid progenitor | 4.69e-07 | 19 |
leukocyte | 6.53e-07 | 17 |
nongranular leukocyte | 6.53e-07 | 17 |
T cell | 6.62e-07 | 11 |
pro-T cell | 6.62e-07 | 11 |
duct epithelial cell | 7.04e-07 | 3 |
epithelial cell of tracheobronchial tree | 7.04e-07 | 3 |
branched duct epithelial cell | 7.04e-07 | 3 |
epithelial cell of lower respiratory tract | 7.04e-07 | 3 |
respiratory epithelial cell | 7.04e-07 | 3 |
tracheal epithelial cell | 7.04e-07 | 3 |
tracheoblast | 7.04e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 2.90e-13 | 46 |
mucosa | 2.00e-10 | 15 |
intestinal mucosa | 1.85e-07 | 13 |
wall of intestine | 1.85e-07 | 13 |
gastrointestinal system mucosa | 1.85e-07 | 13 |
trachea | 7.04e-07 | 3 |
respiratory airway | 7.04e-07 | 3 |
tracheobronchial tree | 7.04e-07 | 3 |
lower respiratory tract | 7.04e-07 | 3 |