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FFCP PHASE1:Mm9::chr19:47125313..47125405,-: Difference between revisions

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{{FFCP|EntrezGene=71041|HGNC=|MCL_coexpression_id=327|UniProt=Q99NA9,E9Q7U7|association_with_transcript=0bp_to_ENSMUST00000026032,ENSMUST00000164903,NM_027654,uc008hul.1,uc008hum.1,uc012bnb.1_5end|description=CAGE_peak_1_at_Pcgf6_5end|id=chr19:47125313..47125405,-|ontology_enrichment_celltype=CL:0000540!3.10e-11!33;CL:0000047!3.10e-11!33;CL:0000031!3.10e-11!33;CL:0000404!3.10e-11!33;CL:0000393!1.10e-08!39;CL:0000211!1.10e-08!39;CL:0000117!5.05e-07!23;CL:0000337!5.05e-07!23;CL:0000542!9.06e-07!13;CL:0000051!9.06e-07!13|ontology_enrichment_celltype_v019_2=CL:0000540,3.10e-11,33;CL:0000047,3.10e-11,33;CL:0000031,3.10e-11,33;CL:0000404,3.10e-11,33;CL:0000393,1.10e-08,39;CL:0000211,1.10e-08,39;CL:0000117,5.05e-07,23;CL:0000337,5.05e-07,23;CL:0000542,9.06e-07,13;CL:0000051,9.06e-07,13|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000153!2.09e-11!94;UBERON:0001017!7.89e-11!73;UBERON:0005743!7.89e-11!73;UBERON:0007811!1.12e-10!86;UBERON:0000073!1.58e-10!75;UBERON:0001016!1.58e-10!75;UBERON:0002020!6.31e-09!34;UBERON:0004121!3.46e-08!102;UBERON:0000924!3.46e-08!102;UBERON:0006601!3.46e-08!102;UBERON:0003056!8.85e-08!49;UBERON:0001049!1.00e-07!52;UBERON:0005068!1.00e-07!52;UBERON:0006241!1.00e-07!52;UBERON:0007135!1.00e-07!52;UBERON:0002346!1.26e-07!71;UBERON:0003075!1.26e-07!71;UBERON:0007284!1.26e-07!71;UBERON:0000033!1.71e-07!63;UBERON:0002791!3.42e-07!29;UBERON:0003528!3.42e-07!29;UBERON:0001893!3.42e-07!29|ontology_enrichment_uberon_v019_2=UBERON:0001017,7.89e-11,73;UBERON:0001016,1.58e-10,75;UBERON:0004121,2.95e-10,95;UBERON:0000924,2.95e-10,95;UBERON:0006601,2.95e-10,95;UBERON:0002346,3.87e-10,64;UBERON:0003075,3.87e-10,64;UBERON:0007284,3.87e-10,64;UBERON:0010371,3.69e-09,73;UBERON:0002020,6.31e-09,34;UBERON:0003056,8.85e-08,49;UBERON:0001049,1.00e-07,52;UBERON:0005068,1.00e-07,52;UBERON:0006241,1.00e-07,52;UBERON:0007135,1.00e-07,52;UBERON:0000073,1.21e-07,54;UBERON:0003528,3.42e-07,29;UBERON:0002791,3.42e-07,29;UBERON:0001893,3.42e-07,29|phase1_expression=39.0763186935697,6.97950815278722,7.27998783023258,7.86406949397758,8.01433167914156,18.4667199103079,17.5209480446644,25.1790480711074,82.0798250144217,80.9863261074097,86.9787278585565,76.7408169535136,26.8785145991993,28.2367899813362,25.3163418979904,16.4004966585759,12.5921138063066,20.5050407482854,23.8579114473985,28.434106670468,42.0964286247795,32.4681410426895,41.5307664730907,16.3192271249275,11.2410547722913,4.59385571292016,9.04600191934057,11.4199753323521,11.2113817479261,11.5933859689568,9.3126814475228,42.5470551217953,33.2134985295668,15.8481681015439,29.46286521463,27.9274204202267,33.4837744270285,0.418531630736908,2.3440060335714,0,1.17646297606203,0,0.971020706062307,22.5355304176283,19.5657477253663,22.2091570115635,7.82391344348039,6.75877984779384,7.68901639570651,13.026803237977,8.39918529752175,5.75010257459886,25.3351735147182,27.5637613964311,35.2898489099587,10.2903774414379,9.45560351797897,8.76642556871652,36.6192794155872,43.3772603003067,33.5930643858275,5.08266798103698,7.11435836888911,5.84934816232909,7.9109309005358,8.5257613793532,8.68840320503374,10.373894243682,26.9592992002042,26.191152036348,21.6634710191923,27.9937964715728,22.7494597180162,27.4379390241497,26.6450409430697,29.4150011715207,20.9220173898839,18.7700386985226,21.5049146558741,42.0717257859318,37.3269585897831,36.4639359389732,20.3803589271008,24.1987922313622,20.7805616976462,36.2393160132611,33.3149733069901,36.3478919359336,21.5062389066243,13.5273092591146,11.0148505706638,14.6272059086836,23.1190253460635,25.9057531986152,11.695975514058,20.1612099193801,17.8364413567325,12.6118438707763,11.4305842025262,12.3668851078619,25.7743458191325,19.2489716121477,35.6727335589304,28.4426681261332,12.7729714196616,11.4011939463794,14.1546844604139,21.009833868307,25.1169747137757,15.7348667408714,13.5318554877586,16.4411358288556,11.992005857315,13.2635923686308,13.0523464920632,9.17366116706631,58.0908174175779,5.49477556295664,14.153768831198,10.8383789464764,13.2504911076236,13.091631834651,11.1835056730873,41.2820923786281,25.5524982312415,16.0937944781413,14.8570754387341,9.59844369589452,13.9777249780371,30.5572904385838,27.9075367719362,36.1884534085049,24.8568777874955,20.4572365864264,24.103413168909,18.8199865158599,11.3041693873851,12.4406970610093,20.7232661915613,9.46988351489133,33.3108333984522,32.1862946206862,28.6298786390505,28.031096117443,24.3570666961754,25.8789714975397,23.144325966253,20.1788629176432,39.2333747137773,31.9589275483615,26.7445708729202,19.5084201860542,27.5266776733342,11.4923214952315,13.1700567301084,25.8744546864041,17.5553296828309,11.3233079130475,9.09323198065896,19.2626968458017,18.0585066185444,15.3052752241863,11.1270025725049,12.5929108318338,10.0273623376796,12.556833016522,9.65784245038629,6.77238985729583,6.25327429671226,7.71587081171748,6.48550476366846,5.84799949701329,8.78200461164202,8.05238512562231,27.9685631590289,36.1195189451288,6.938794442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{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=71041
|HGNC=
|MCL_coexpression_id=327
|TSSclassifier=NA
|UniProt=Q99NA9,E9Q7U7
|association_with_transcript=0bp_to_ENSMUST00000026032,ENSMUST00000164903,NM_027654,uc008hul.1,uc008hum.1,uc012bnb.1_5end
|cluster_id=chr19:47125313..47125405,-
|description=CAGE_peak_1_at_Pcgf6_5end
|id=chr19:47125313..47125405,-
|ontology_enrichment_celltype=CL:0000540!3.10e-11!33;CL:0000047!3.10e-11!33;CL:0000031!3.10e-11!33;CL:0000404!3.10e-11!33;CL:0000393!1.10e-08!39;CL:0000211!1.10e-08!39;CL:0000117!5.05e-07!23;CL:0000337!5.05e-07!23;CL:0000542!9.06e-07!13;CL:0000051!9.06e-07!13
|ontology_enrichment_celltype_v019_2=CL:0000540,3.10e-11,33;CL:0000047,3.10e-11,33;CL:0000031,3.10e-11,33;CL:0000404,3.10e-11,33;CL:0000393,1.10e-08,39;CL:0000211,1.10e-08,39;CL:0000117,5.05e-07,23;CL:0000337,5.05e-07,23;CL:0000542,9.06e-07,13;CL:0000051,9.06e-07,13
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000153!2.09e-11!94;UBERON:0001017!7.89e-11!73;UBERON:0005743!7.89e-11!73;UBERON:0007811!1.12e-10!86;UBERON:0000073!1.58e-10!75;UBERON:0001016!1.58e-10!75;UBERON:0002020!6.31e-09!34;UBERON:0004121!3.46e-08!102;UBERON:0000924!3.46e-08!102;UBERON:0006601!3.46e-08!102;UBERON:0003056!8.85e-08!49;UBERON:0001049!1.00e-07!52;UBERON:0005068!1.00e-07!52;UBERON:0006241!1.00e-07!52;UBERON:0007135!1.00e-07!52;UBERON:0002346!1.26e-07!71;UBERON:0003075!1.26e-07!71;UBERON:0007284!1.26e-07!71;UBERON:0000033!1.71e-07!63;UBERON:0002791!3.42e-07!29;UBERON:0003528!3.42e-07!29;UBERON:0001893!3.42e-07!29
|ontology_enrichment_uberon_v019_2=UBERON:0001017,7.89e-11,73;UBERON:0001016,1.58e-10,75;UBERON:0004121,2.95e-10,95;UBERON:0000924,2.95e-10,95;UBERON:0006601,2.95e-10,95;UBERON:0002346,3.87e-10,64;UBERON:0003075,3.87e-10,64;UBERON:0007284,3.87e-10,64;UBERON:0010371,3.69e-09,73;UBERON:0002020,6.31e-09,34;UBERON:0003056,8.85e-08,49;UBERON:0001049,1.00e-07,52;UBERON:0005068,1.00e-07,52;UBERON:0006241,1.00e-07,52;UBERON:0007135,1.00e-07,52;UBERON:0000073,1.21e-07,54;UBERON:0003528,3.42e-07,29;UBERON:0002791,3.42e-07,29;UBERON:0001893,3.42e-07,29
|phase1_expression=39.0763186935697,6.97950815278722,7.27998783023258,7.86406949397758,8.01433167914156,18.4667199103079,17.5209480446644,25.1790480711074,82.0798250144217,80.9863261074097,86.9787278585565,76.7408169535136,26.8785145991993,28.2367899813362,25.3163418979904,16.4004966585759,12.5921138063066,20.5050407482854,23.8579114473985,28.434106670468,42.0964286247795,32.4681410426895,41.5307664730907,16.3192271249275,11.2410547722913,4.59385571292016,9.04600191934057,11.4199753323521,11.2113817479261,11.5933859689568,9.3126814475228,42.5470551217953,33.2134985295668,15.8481681015439,29.46286521463,27.9274204202267,33.4837744270285,0.418531630736908,2.3440060335714,0,1.17646297606203,0,0.971020706062307,22.5355304176283,19.5657477253663,22.2091570115635,7.82391344348039,6.75877984779384,7.68901639570651,13.026803237977,8.39918529752175,5.75010257459886,25.3351735147182,27.5637613964311,35.2898489099587,10.2903774414379,9.45560351797897,8.76642556871652,36.6192794155872,43.3772603003067,33.5930643858275,5.08266798103698,7.11435836888911,5.84934816232909,7.9109309005358,8.5257613793532,8.68840320503374,10.373894243682,26.9592992002042,26.191152036348,21.6634710191923,27.9937964715728,22.7494597180162,27.4379390241497,26.6450409430697,29.4150011715207,20.9220173898839,18.7700386985226,21.5049146558741,42.0717257859318,37.3269585897831,36.4639359389732,20.3803589271008,24.1987922313622,20.7805616976462,36.2393160132611,33.3149733069901,36.3478919359336,21.5062389066243,13.5273092591146,11.0148505706638,14.6272059086836,23.1190253460635,25.9057531986152,11.695975514058,20.1612099193801,17.8364413567325,12.6118438707763,11.4305842025262,12.3668851078619,25.7743458191325,19.2489716121477,35.6727335589304,28.4426681261332,12.7729714196616,11.4011939463794,14.1546844604139,21.009833868307,25.1169747137757,15.7348667408714,13.5318554877586,16.4411358288556,11.992005857315,13.2635923686308,13.0523464920632,9.17366116706631,58.0908174175779,5.49477556295664,14.153768831198,10.8383789464764,13.2504911076236,13.091631834651,11.1835056730873,41.2820923786281,25.5524982312415,16.0937944781413,14.8570754387341,9.59844369589452,13.9777249780371,30.5572904385838,27.9075367719362,36.1884534085049,24.8568777874955,20.4572365864264,24.103413168909,18.8199865158599,11.3041693873851,12.4406970610093,20.7232661915613,9.46988351489133,33.3108333984522,32.1862946206862,28.6298786390505,28.031096117443,24.3570666961754,25.8789714975397,23.144325966253,20.1788629176432,39.2333747137773,31.9589275483615,26.7445708729202,19.5084201860542,27.5266776733342,11.4923214952315,13.1700567301084,25.8744546864041,17.5553296828309,11.3233079130475,9.09323198065896,19.2626968458017,18.0585066185444,15.3052752241863,11.1270025725049,12.5929108318338,10.0273623376796,12.556833016522,9.65784245038629,6.77238985729583,6.25327429671226,7.71587081171748,6.48550476366846,5.84799949701329,8.78200461164202,8.05238512562231,27.9685631590289,36.1195189451288,6.93879444265976,18.7759902331116,28.7939138222566,28.1006372951131,25.3868898804524,15.327947871374,20.0140239460383,18.8323369851434,15.6594590309689,13.3406153326449,16.3367885720175,17.7071260116624,16.7669114922443,12.5834717211591,13.8328351919804,13.3424653080426,32.0538752610708,26.962648975896,25.9227792048085,24.0308566857471,22.6924409986122,23.3552280234761,19.3503803600227,19.6321496812871,13.9728867778824,14.5608653427725,18.9729681335775,28.1968228660199,24.176756398924,23.3856596880248,21.3003127457928,18.8118184606885,16.2960545140109,21.5772103088108,26.7523124178808,16.1991233780968,46.0058260887535,16.3742016974142,10.6092808858951,17.9331003342449,9.86685774370517,20.2626278972614,9.05290631816363,30.1291344715071,23.7928865605358,24.1038021800767,20.1833613528112,14.9080569123216,9.75978927632656,13.8544889979037,12.1379060961767,6.42247599981447,7.17546458958692,7.37384916220821,5.69860440157455,8.53429445630918,10.5553898757491,3.80733978673097,6.88469982226651,15.7283945393698,22.7981837782665,20.9808919000044,23.9345020249946,10.0988370881749,30.9198055027932,38.6534356853672,29.0821586939279,32.021818925642,30.523418349288,31.7045714483492,30.3608026256171,26.5952830699294,38.3429144608128,40.1651645527259,22.2845933776982,17.6284947630583,19.8722090411363,21.2811458634571,27.8764790513922,20.8791347093284,19.9533547596736,14.5225911412042,13.8791889653963,16.2940628410282,19.3821219876166,17.4496190149203,16.7553767840819,18.3301319602773,23.1920938864997,13.4076206222643,16.3411010761818,28.2695917629157,23.9313564998096,20.3620183280013,26.0690143454142,16.9450376721967,15.4676079365994,10.9607381681256,15.7230044402686,18.2175580942885,13.6727606794076,22.5894166529828,10.6566521619298,17.6716870039497,18.0252239444736,20.3534715683876,14.8655226681224,21.5093350332191,16.4036045565939,11.5576646059405,19.0750363190803,14.8811081033706,19.5472745641066,16.2432502976631,14.7881234094654,15.2547083032787,14.7873971970733,11.4560474161814,28.3120714255116,17.2821547057821,17.4968652131318,12.1271211688392,17.4690050996942,14.7002137559455,13.0592460046031,9.42321391142507,10.4988128366352,10.5627683224777,211.948544945256,26.1653955576963,19.6895603643946,20.417374776125,11.1077448190849,13.0096216627899,16.4300134104056,26.171081353634,27.578007583962,153.889084966166,106.283072309152,20.8567339614598,19.8670710984361,25.1641845053827,29.8817892848929,31.1506450461418,21.0602236068141,18.6302946755952,19.3473280598696,18.8807261403036,19.66135611699,17.9470609543576,18.3220815790735,17.9916143867416,14.9602434792408,12.4701710988366,51.500741182783,49.8809042748685,38.7813463801021,25.8874056003135,18.9559300205694,26.3738338944862,19.7218908752741,12.5393026008841,30.4965995013216,36.365693684067,35.5195218332426,17.8727309637435,26.718218271055,37.769694869485,24.300810008345,27.9199145999017,29.9073989929575,35.2077011991238,34.7687614406992,28.7297908848742,28.6832457666945,17.0174701947806,27.6689374668937,25.3704041661019,20.8911924133518,25.9604172121007,22.1434254618353,19.96307972934,20.7853025909997,20.7488975524684,18.9155845089162,19.079495416651,17.9198663141513,16.6702791949076,15.9920369803901,11.767462448286,16.071350131329,20.6078488188156,22.6293706574374,22.0069999637578,15.0214799666812,19.476419828732,20.0452980284654,18.6998283440605,15.7318056670584,19.7302283578382,17.3829265722703,26.9348290395714,16.7275375555086,15.9577261448413,16.7784727699573,19.0572314658738,18.9048478761519,19.2354145012218,17.0770074165148,16.9748132698156,10.9034349279241,11.9119366324538,12.7527309591232
|short_description=p1@Pcgf6
}}

Latest revision as of 21:45, 25 September 2015

Short description:p1@Pcgf6
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Pcgf6_5end
Coexpression cluster:MCL_coexpression_mm9:327
Association with transcript: 0bp_to_ENSMUST00000026032, ENSMUST00000164903, NM_027654, uc008hul.1, uc008hum.1, uc012bnb.1_5end
EntrezGene:Pcgf6
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Pcgf6

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G739.08
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I56.98
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I67.28
CD326+ enterocyte, pool1.CNhs13542.11848-124I37.86
CD326+ enterocyte, pool2.CNhs13197.11849-124I48.01
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I718.47
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I817.52
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E925.18
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E782.08
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F280.99
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E686.98
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F176.74
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E426.88
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E828.24
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A125.32
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A316.40
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A512.59
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A220.51
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A423.86
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A628.43
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A342.10
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H232.47
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I941.53
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D116.32
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D211.24
GP2+ M cell, pool1.CNhs13228.11845-124H94.59
GP2+ M cell, pool2.CNhs13231.11846-124I19.05
GP2+ M cell, pool3.CNhs13240.11847-124I211.42
Ileum epithelium, pool1.CNhs13199.10252-104B911.21
Ileum epithelium, pool2.CNhs13232.10253-104C111.59
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C89.31
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I342.55
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G633.21
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E915.85
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F529.46
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F627.93
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F733.48
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.42
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H12.34
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G91.18
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.97
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D822.54
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D919.57
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B322.21
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B77.82
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C26.76
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B87.69
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C313.03
Mouse Astrocytes, donor2.CNhs12078.11552-120C48.40
Mouse Astrocytes, donor3.CNhs12107.11633-122C45.75
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A225.34
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I927.56
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A135.29
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C110.29
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E19.46
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C58.77
Mouse Granule cells, donor1.CNhs12131.11713-123C336.62
Mouse Granule cells, donor2.CNhs12357.11731-123E343.38
Mouse Granule cells, donor3.CNhs12108.11636-122C733.59
Mouse Meningeal cells, donor1.CNhs12132.11716-123C65.08
Mouse Meningeal cells, donor3.CNhs12109.11639-122D17.11
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C75.85
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E77.91
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D28.53
Mouse Microglia, donor1.CNhs12629.11718-123C88.69
Mouse Microglia, donor2.CNhs12634.11736-123E810.37
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D526.96
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F526.19
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D921.66
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F127.99
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D522.75
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D227.44
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F226.65
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D629.42
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D320.92
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F318.77
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D721.50
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D442.07
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F437.33
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D836.46
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E420.38
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E524.20
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I620.78
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D636.24
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F633.31
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E136.35
Mouse Schwann, donor1.CNhs12507.11728-123D921.51
Mouse Schwann, donor2.CNhs12573.11746-123F913.53
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G311.01
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F714.63
Mouse hepatocyte, donor1.CNhs13078.11714-123C423.12
Mouse hepatocyte, donor3.CNhs12615.11637-122C825.91
Mouse hepatocyte, donor6.CNhs13090.11822-124F411.70
Mouse hepatocyte, donor8.CNhs13091.11824-124F620.16
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A717.84
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I712.61
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E311.43
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I812.37
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G625.77
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H119.25
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I835.67
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B628.44
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G112.77
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G211.40
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G314.15
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B621.01
accessory axillary lymph node, adult.CNhs10475.1063-29H925.12
adrenal gland, adult.CNhs10508.49-24D715.73
adrenal gland, embryo E14.CNhs11038.406-44C513.53
adrenal gland, embryo E16.CNhs11004.1254-43D616.44
adrenal gland, embryo E17.CNhs11043.1263-45I111.99
adrenal gland, embryo E18.CNhs11026.1262-18F513.26
adrenal gland, neonate N00.CNhs11191.1311-23C113.05
adrenal gland, neonate N25.CNhs11223.1377-27I39.17
amnion, adult pregnant day17.5.CNhs10488.583-22A858.09
aorta, adult.CNhs10498.46-23H15.49
bone (os femoris), adult.CNhs10483.56-12G214.15
bone (os femoris), neonate N02.CNhs11227.1985-43F510.84
bone (os femoris), neonate N16.CNhs11225.1525-43A613.25
bone (os femoris), neonate N20.CNhs11195.1350-25C313.09
cecum, adult.CNhs10467.37-13H411.18
cerebellum, adult.CNhs10494.15-8B241.28
cerebellum, neonate N30.CNhs11135.1395-42I225.55
colon, adult.CNhs10468.36-18H716.09
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C714.86
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D19.60
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D413.98
corpora quadrigemina, adult.CNhs10501.16-22A430.56
corpus striatum, adult.CNhs10487.19-21D827.91
corpus striatum, neonate N00.CNhs11226.630-43F136.19
cortex, adult.CNhs10473.12-14D524.86
cortex, neonate N30.CNhs11107.1392-42F220.46
diencephalon, adult.CNhs10482.20-12F224.10
diencephalon, neonate N30.CNhs11201.1388-42B218.82
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B111.30
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A212.44
epididymis, adult.CNhs10490.58-23B220.72
eyeball, adult.CNhs10484.31-12G49.47
eyeball, embryo E12.CNhs11016.345-16C633.31
eyeball, embryo E14.CNhs10521.399-16E232.19
eyeball, embryo E15.CNhs10593.426-16C928.63
eyeball, embryo E17.CNhs11023.1261-18D428.03
eyeball, neonate N00.CNhs11207.633-15C624.36
eyeball, neonate N01.CNhs11140.1532-43E725.88
eyeball, neonate N02.CNhs11205.1551-44G823.14
eyeball, neonate N16.CNhs11188.777-19A220.18
forelimb, embryo E11.CNhs10596.335-25E239.23
forelimb, embryo E12.CNhs10600.359-14H231.96
forelimb, embryo E13.CNhs10589.384-1E226.74
forelimb, embryo E14.CNhs10577.413-26A819.51
forelimb, embryo E15.CNhs11007.437-20E727.53
forelimb, embryo E17.CNhs10598.1517-43C411.49
forelimb, embryo E18.CNhs11008.1520-43B513.17
gonad, embryo E13.CNhs11044.1564-45I625.87
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C817.56
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D211.32
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D59.09
heart, embryo E11.CNhs10586.331-24E919.26
heart, embryo E12.CNhs11015.353-12F518.06
heart, embryo E13.CNhs11013.376-3I915.31
heart, embryo E14.CNhs10597.403-26D411.13
heart, embryo E15.CNhs11017.431-16C812.59
heart, embryo E16.CNhs11021.457-17C610.03
heart, embryo E17.CNhs11025.479-18E512.56
heart, embryo E18.CNhs11030.1283-20G39.66
heart, neonate N00.CNhs11213.639-21E36.77
heart, neonate N03.CNhs11221.1349-25I26.25
heart, neonate N10.CNhs11118.749-24G17.72
heart, neonate N16.CNhs11209.782-15G16.49
heart, neonate N20.CNhs11127.821-26I65.85
heart, neonate N25.CNhs11196.1351-25D38.78
heart, neonate N30.CNhs11202.1390-42D28.05
hippocampus, adult.CNhs10478.13-16E827.97
hippocampus, neonate N00.CNhs11228.627-43G136.12
intestinal mucosa, adult.CNhs10506.860-29I36.94
intestine, adult.CNhs10496.178-9A318.78
intestine, embryo E12.CNhs11019.1251-16I528.79
intestine, embryo E13.CNhs11010.381-16D528.10
intestine, embryo E15.CNhs10602.976-16D825.39
intestine, embryo E16.CNhs10585.463-22H415.33
intestine, embryo E17.CNhs10582.482-18D320.01
intestine, embryo E18.CNhs10526.1289-20F718.83
intestine, neonate N00.CNhs11126.644-26D115.66
intestine, neonate N01.CNhs11192.1322-23E913.34
intestine, neonate N06.CNhs11102.688-20B816.34
intestine, neonate N07.CNhs11095.720-20F217.71
intestine, neonate N10.CNhs11098.755-23A516.77
intestine, neonate N20.CNhs11187.827-18D112.58
intestine, neonate N25.CNhs11121.1352-25E313.83
intestine, neonate N30.CNhs11131.1384-42G113.34
kidney, embryo E14.CNhs10606.411-4I932.05
kidney, embryo E15.CNhs10997.434-16F826.96
kidney, embryo E16.CNhs10584.464-22A525.92
kidney, embryo E17.CNhs11028.483-18I224.03
kidney, embryo E18.CNhs11001.1288-20C722.69
kidney, neonate N00.CNhs11214.646-21G723.36
kidney, neonate N10.CNhs11206.758-6D519.35
kidney, neonate N20.CNhs11113.832-19I119.63
kidney, neonate N25.CNhs11122.1353-25F313.97
kidney, neonate N30.CNhs11203.1385-42H114.56
liver, adult pregnant day01.CNhs10466.508-5B218.97
liver, embryo E12.CNhs10601.355-15F828.20
liver, embryo E13.CNhs10524.378-3H624.18
liver, embryo E14.CNhs10594.409-16E123.39
liver, embryo E15.CNhs10520.433-16D721.30
liver, embryo E16.CNhs10523.462-17F518.81
liver, embryo E17.CNhs10510.481-18A316.30
liver, embryo E18.CNhs10579.499-43G421.58
liver, neonate N00.CNhs11117.641-24F426.75
liver, neonate N03.CNhs11123.1345-25G216.20
liver, neonate N06.CNhs11101.684-20A846.01
liver, neonate N07.CNhs11103.716-20H216.37
liver, neonate N10.CNhs11115.751-24B910.61
liver, neonate N20.CNhs11220.823-25A317.93
liver, neonate N25.CNhs11198.1368-26H19.87
liver, neonate N30.CNhs11106.1382-42D120.26
lung, adult.CNhs10474.28-22B19.05
lung, embryo E12.CNhs10522.354-16G230.13
lung, embryo E14.CNhs10604.404-26F823.79
lung, embryo E15.CNhs11020.432-17C524.10
lung, embryo E16.CNhs10998.458-17B620.18
lung, embryo E17.CNhs10605.480-44A614.91
lung, embryo E18.CNhs10583.1287-20I69.76
lung, neonate N00.CNhs11224.640-42C613.85
lung, neonate N06.CNhs11212.683-20E512.14
lung, neonate N07.CNhs11111.715-19A36.42
lung, neonate N10.CNhs11219.750-23E67.18
lung, neonate N20.CNhs11109.822-18A47.37
lung, neonate N25.CNhs11119.1359-25C75.70
lung, neonate N30.CNhs11133.1394-42H28.53
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A110.56
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A13.81
mammary gland, adult lactating day02.CNhs10480.595-22B66.88
mammary gland, adult pregnant day19.CNhs10476.588-5H215.73
medulla oblongata, adult.CNhs10477.17-12C222.80
medulla oblongata, neonate N30.CNhs11200.1396-42A320.98
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C723.93
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C210.10
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E130.92
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E238.65
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E329.08
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D732.02
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D830.52
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D931.70
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D430.36
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D526.60
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D638.34
olfactory brain, adult.CNhs10489.18-22I940.17
ovary, adult.CNhs10507.91-2I722.28
ovary, embryo E18.CNhs11040.505-44H717.63
ovary, neonate N00.CNhs11217.1299-22I419.87
oviduct, adult pregnant day01.CNhs10500.988-6G621.28
pancreas, adult.CNhs10486.34-16E427.88
pancreas, embryo E14.CNhs11012.405-44F420.88
pancreas, embryo E15.CNhs11042.1556-45F219.95
pancreas, embryo E16.CNhs11003.460-26E514.52
pancreas, embryo E17.CNhs10599.1558-45G313.88
pancreas, embryo E18.CNhs10580.1535-43I716.29
pancreas, neonate N00.CNhs11105.645-26G919.38
pancreas, neonate N01.CNhs11138.1531-43D717.45
pancreas, neonate N02.CNhs11139.1539-43D816.76
pancreas, neonate N16.CNhs11136.787-43B618.33
pancreas, neonate N25.CNhs11094.1555-45E223.19
pancreas, neonate N30.CNhs11182.1548-44H513.41
pituitary gland, adult.CNhs10493.21-1G816.34
pituitary gland, embryo E12.CNhs11018.346-16E628.27
pituitary gland, embryo E13.CNhs11009.370-44C723.93
pituitary gland, embryo E14.CNhs11037.398-44A520.36
pituitary gland, embryo E15.CNhs10592.427-16B926.07
pituitary gland, embryo E16.CNhs11036.449-43F616.95
pituitary gland, embryo E17.CNhs11039.1265-44F515.47
pituitary gland, neonate N00.CNhs11190.1308-22E910.96
placenta, adult pregnant day10.CNhs10472.539-13I715.72
placenta, adult pregnant day17.CNhs10464.577-18G318.22
prostate, adult.CNhs10470.859-1F813.67
skin, adult.CNhs10492.30-1C322.59
skin, neonate N00.CNhs11124.650-25G410.66
skin, neonate N03.CNhs11215.662-22H317.67
skin, neonate N06.CNhs11097.693-20I518.03
skin, neonate N10.CNhs11108.762-6C420.35
small intestine, neonate N16.CNhs11114.790-21I114.87
spinal cord, adult.CNhs10505.24-13C921.51
spleen, adult.CNhs10465.25-2G216.40
spleen, embryo E16.CNhs11035.461-43C111.56
spleen, embryo E18.CNhs11011.1271-21F219.08
spleen, neonate N10.CNhs11116.752-24D114.88
spleen, neonate N20.CNhs11112.824-19H119.55
spleen, neonate N25.CNhs11099.1354-25G316.24
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C614.79
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C915.25
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D314.79
stomach, adult.CNhs10503.33-1H611.46
stomach, embryo E12.CNhs10588.356-43E328.31
stomach, embryo E15.CNhs10603.1252-16G817.28
stomach, embryo E16.CNhs11022.459-17D417.50
stomach, embryo E17.CNhs11006.1035-18D512.13
stomach, embryo E18.CNhs10999.1286-20C617.47
stomach, neonate N03.CNhs11193.1340-24B814.70
stomach, neonate N07.CNhs11210.718-18A913.06
stomach, neonate N25.CNhs11104.1355-25E49.42
stomach, neonate N30.CNhs11134.1386-42I110.50
submandibular gland, adult.CNhs10469.59-29C110.56
testis, adult.CNhs10504.57-7G5211.95
testis, embryo E13.CNhs11031.389-23F526.17
testis, embryo E15.CNhs11034.443-27C519.69
testis, embryo E16.CNhs11033.470-26G520.42
testis, embryo E17.CNhs11029.486-18I511.11
testis, embryo E18.CNhs11027.503-18G513.01
testis, neonate N00.CNhs11189.1300-22B716.43
testis, neonate N07.CNhs11222.726-26I426.17
testis, neonate N10.CNhs11204.763-44D927.58
testis, neonate N20.CNhs11110.839-18H3153.89
testis, neonate N30.CNhs11130.1391-42E2106.28
thymus, adult.CNhs10471.38-12B520.86
thymus, embryo E14.CNhs11041.402-44I419.87
thymus, embryo E15.CNhs11005.430-45I225.16
thymus, embryo E16.CNhs11002.456-26C529.88
thymus, embryo E17.CNhs10581.478-18C131.15
thymus, embryo E18.CNhs10595.1273-19G421.06
thymus, neonate N02.CNhs11181.1541-43F818.63
thymus, neonate N03.CNhs11137.2104-43C719.35
thymus, neonate N06.CNhs11197.681-26C418.88
thymus, neonate N07.CNhs11211.713-19D319.66
thymus, neonate N10.CNhs11194.748-24E417.95
thymus, neonate N20.CNhs11186.820-7A218.32
thymus, neonate N25.CNhs11125.1362-25G717.99
thymus, neonate N30.CNhs11132.1393-42G214.96
tongue, adult.CNhs10499.32-1B412.47
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H351.50
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F749.88
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G538.78
urinary bladder, adult.CNhs10481.879-12E425.89
uterus, adult pregnant day19.CNhs10497.590-15F518.96
uterus, adult.CNhs10509.92-27E526.37
vagina, adult.CNhs10502.89-27D519.72
vesicular gland, adult.CNhs10491.51-27F812.54
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A130.50
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A236.37
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A335.52
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D717.87
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A426.72
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A537.77
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A624.30
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A727.92
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A829.91
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A935.21
whole body, embryo E11.CNhs11014.324-5I834.77
whole body, embryo E12.CNhs10587.857-27C928.73
whole body, embryo E13.CNhs10512.372-23H228.68
whole body, embryo E14.5.CNhs10578.420-27D217.02
whole body, embryo E14.CNhs10519.395-14B127.67
whole body, embryo E16.CNhs10514.453-14F225.37
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G520.89
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G525.96
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G522.14
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G519.96
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G520.79
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G520.75
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G518.92
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G519.08
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G517.92
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G516.67
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G515.99
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G511.77
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G516.07
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G520.61
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G522.63
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G522.01
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G515.02
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G519.48
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G520.05
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G518.70
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G515.73
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G519.73
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G517.38
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G526.93
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G516.73
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G515.96
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G516.78
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G519.06
whole body, embryo E17.5.CNhs10513.490-9F918.90
whole body, embryo E17.CNhs10517.475-3I519.24
whole body, embryo E18.CNhs10516.493-3B317.08
whole body, neonate N00.CNhs10525.657-19C216.97
whole body, neonate N01.CNhs10576.659-23C610.90
whole body, neonate N06.CNhs10515.692-21D111.91
whole body, neonate N10.CNhs10518.761-6B412.75





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
central nervous system7.89e-1173
nervous system1.58e-1075
ectoderm-derived structure2.95e-1095
ectoderm2.95e-1095
presumptive ectoderm2.95e-1095
neurectoderm3.87e-1064
neural plate3.87e-1064
presumptive neural plate3.87e-1064
ecto-epithelium3.69e-0973
gray matter6.31e-0934
pre-chordal neural plate8.85e-0849
neural tube1.00e-0752
neural rod1.00e-0752
future spinal cord1.00e-0752
neural keel1.00e-0752
regional part of nervous system1.21e-0754
brain grey matter3.42e-0729
regional part of telencephalon3.42e-0729
telencephalon3.42e-0729
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