FFCP PHASE1:Mm9::chr3:95659700..95659745,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr3:95659700..95659745,- to FFCP PHASE1:Mm9::chr3:95659700..95659745,-: NSchange) |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=70767 | |EntrezGene=70767 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1134 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENSMUST00000161073,uc008qlg.1_5end | |||
|cluster_id=chr3:95659700..95659745,- | |||
|description=CAGE_peak_1_at_Prpf3_5end | |||
|id=chr3:95659700..95659745,- | |||
|ontology_enrichment_celltype=CL:0002031!1.47e-08!25;CL:0000542!7.20e-08!13;CL:0000051!7.20e-08!13;CL:0000988!1.10e-07!32;CL:0002032!1.10e-07!32;CL:0000037!1.10e-07!32;CL:0000566!1.10e-07!32;CL:0000837!1.10e-07!32;CL:0000838!1.44e-07!12;CL:0000084!5.34e-07!11;CL:0000827!5.34e-07!11 | |||
|ontology_enrichment_celltype_v019_2=CL:0002031,1.47e-08,25;CL:0000542,7.20e-08,13;CL:0000051,7.20e-08,13;CL:0000988,1.10e-07,32;CL:0002032,1.10e-07,32;CL:0000037,1.10e-07,32;CL:0000837,1.10e-07,32;CL:0000838,1.44e-07,12;CL:0000084,5.34e-07,11;CL:0000827,5.34e-07,11 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004177!1.28e-10!29;UBERON:0001048!8.99e-09!147;UBERON:0002370!1.31e-08!23;UBERON:0000974!1.31e-08!23;UBERON:0004807!1.31e-08!23;UBERON:0005058!1.31e-08!23;UBERON:0003351!1.31e-08!23;UBERON:0009113!1.31e-08!23;UBERON:0003295!1.31e-08!23;UBERON:0009722!1.31e-08!23;UBERON:0005562!1.31e-08!23;UBERON:0007690!1.31e-08!23;UBERON:0002390!1.89e-08!45;UBERON:0003061!1.89e-08!45;UBERON:0002193!6.08e-08!48;UBERON:0003408!6.89e-08!24;UBERON:0006562!1.24e-07!24;UBERON:0001557!1.24e-07!24;UBERON:0001042!1.24e-07!24;UBERON:0008814!1.24e-07!24;UBERON:0009145!1.24e-07!24;UBERON:0003081!9.00e-07!88 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004177,1.28e-10,29;UBERON:0005057,1.28e-10,29;UBERON:0000153,5.30e-09,43;UBERON:0001048,5.85e-09,134;UBERON:0000077,1.04e-08,35;UBERON:0002370,1.31e-08,23;UBERON:0000974,1.31e-08,23;UBERON:0004807,1.31e-08,23;UBERON:0005058,1.31e-08,23;UBERON:0003351,1.31e-08,23;UBERON:0009113,1.31e-08,23;UBERON:0003295,1.31e-08,23;UBERON:0009722,1.31e-08,23;UBERON:0005562,1.31e-08,23;UBERON:0007690,1.31e-08,23;UBERON:0002390,1.89e-08,45;UBERON:0003061,1.89e-08,45;UBERON:0002193,6.08e-08,48;UBERON:0002405,6.08e-08,48;UBERON:0003408,6.89e-08,24;UBERON:0006562,1.24e-07,24;UBERON:0001557,1.24e-07,24;UBERON:0001042,1.24e-07,24;UBERON:0008814,1.24e-07,24;UBERON:0009145,1.24e-07,24;UBERON:0007811,1.90e-07,36 | |||
|phase1_expression=12.6517589212787,10.4692622291808,5.91499011206397,12.0985684522732,9.01612313903425,9.56911849897772,9.34450562382103,16.9151553708465,42.0958279233484,26.2152269480633,34.4148116133265,37.8120033637895,21.9136934311943,21.1557373853974,19.3203661853084,23.8920815519995,20.9868563438444,22.8710069884722,22.8981104121584,19.0975343309114,11.2257142999412,15.7872612409408,18.2839852397255,10.8794847499517,9.63518980482114,5.16808767703518,11.630573896295,10.5580904016086,10.0712412311878,12.8535366177565,10.8647950221099,12.7006134691926,20.9122027778754,31.6963362030877,15.5979874665688,14.4624141461888,16.3335485009895,8.78916424547506,11.720030167857,11.5175223674236,8.82347232046521,8.19654581950135,10.6812277666854,10.3235390739973,7.40051597902456,9.9115246167308,4.69434806608824,5.23260375313072,2.63623419281366,5.44403717407994,7.97922603264566,0,21.9795213935635,21.035502118329,21.5100031451177,8.48956138918625,8.5960031981627,7.21940929188419,9.5088736604011,7.40587370980846,14.5781222806421,3.38844532069132,5.33576877666684,3.1496490104849,3.9554654502679,2.1314403448383,2.39680088414724,1.92109152660777,15.0349937847293,10.6654691282036,12.4091727197315,6.28432165688368,6.84692476950002,16.4137670948038,16.9646483702278,11.9498442259303,6.60695285996332,9.19348834213351,7.68032666281217,12.7929699098288,14.9124859071928,10.939180781692,7.81712397203867,7.87867654044352,8.40390362772456,7.07108605136802,9.681274294339,12.3023634244698,16.2811315666346,15.6433129421046,12.7540375028738,14.6272059086836,6.11974200336975,3.2382191498269,8.4470934268197,8.06448396775204,12.3591089715942,14.827438064291,14.2882302531578,10.6001872353102,8.59144860637751,10.2661181931454,12.7402619853323,0,12.123498296628,9.37431502257865,6.57181778519218,9.24889425724386,17.6077760880077,9.20341262201914,11.6235168933311,10.9607572192371,10.6083128737787,9.3448037142626,12.346814249249,7.28866229712118,12.1125534189843,10.5557530551536,22.9998743506967,15.0443170451091,14.1338571814652,19.3950101254089,13.0474232852686,18.737971008739,19.6879904404648,12.2619386500124,12.8202183221335,9.59844369589452,12.4528822531603,12.1330417917906,10.0650132620098,15.0785222535437,10.9509321721134,10.9957646652042,7.68815764870372,11.6813709408785,12.7299204812895,12.4406970610093,7.83440551144392,11.5743020737561,19.9084277732937,14.4838325793088,16.9258402017028,17.7831685046144,15.6483948048054,16.5266699167456,17.4285207681096,12.1590584247337,21.5567992932842,19.6670323374532,18.6508191613786,16.2204841996405,14.7365042089567,13.5818344943645,13.7874031393322,17.3159812132089,17.5553296828309,13.8967869841946,10.7982129770325,14.2916783049496,12.6644072389792,16.7457717158744,15.1516630774535,15.3476100762975,15.5809784016252,12.7893669612724,10.7309360559848,10.9759421825139,13.6584675428189,18.3867559768587,11.9981838127866,11.1111990443253,12.5143565715899,9.79706856950714,15.3511662451813,15.3327872445134,12.5559137533843,10.8424732332053,17.4896365438892,17.1855137176724,17.912577123771,15.7313149206207,15.5664630691409,11.7939888189787,10.4396393539793,12.8465184684728,15.3314477368164,15.7175612912509,12.6726656627428,20.6728463990471,12.3198688428576,15.9313018603494,15.7424357791058,15.994791765362,20.2873924211545,11.8117770150282,11.8311017172252,12.2036326609154,10.9399209224965,10.0374900626129,10.8329122210549,9.00799296629144,12.1545577105731,24.0256952231175,16.7075145846223,22.2613491261005,19.6774317746848,15.9176925436595,14.0044218479781,16.686375972147,10.2145192868272,10.7078951143352,18.6898668485561,9.30352369171258,9.98520553966594,9.09283960609602,8.96987067609561,6.27176577772377,11.4546977903295,12.127450353311,21.6743418667894,14.2585872051158,14.5507953938871,12.730475565578,10.7119638398706,11.3177515757523,11.3497303756458,14.3952048271704,16.4238411717212,15.5670148979951,14.3328534948693,13.8863096238251,13.5712155545345,13.053736411649,9.83528546038072,8.82997588175144,9.63303539926752,9.02529986759964,8.6885521049638,5.80683132570058,9.14973836307144,7.80877488593277,9.47862950024315,11.2315335037699,11.1399337041197,7.35998980050964,9.71545684019746,8.47541987942804,12.2539211163422,19.2792789853084,9.36804562374573,13.8891170860459,14.3340524231147,12.3727592229402,10.619611067197,14.3240575331439,11.7906187216253,14.5225911412042,13.2885851796348,14.7568871013085,12.4045580720746,12.3601468022352,12.4774082434652,12.6414703174326,11.5960469432499,8.25084345985495,19.4050575279659,14.5849486165361,11.1248468053169,15.6466035573062,13.3005175231705,13.7343989553594,14.1512157717824,12.7875278628132,16.192347856396,12.921756322693,7.93902232997863,10.7176064411962,10.172258881842,19.3001359770099,15.8765217524172,12.6388492803697,15.1570035047522,5.7481843623258,18.2831842453702,13.6215332855727,16.4823129359043,20.720530270516,23.1013244848533,19.2173665493479,15.4680371294408,11.8958734475109,12.0233977209849,8.59203556213602,20.7200075795644,17.0788352386553,14.688726351765,11.2907679847813,10.2630404960703,14.5653494095606,11.4061768900964,7.59092231753686,8.68420321055012,9.94142900939081,18.6018669765783,17.9419855252775,15.0567226315959,18.6673140810286,16.6616172286273,17.2335248000594,12.7919390123872,19.5306577265925,20.7621501962907,26.5742532908607,20.1621004380506,15.1685337901526,14.5962155008918,15.5093545318889,16.6298653411578,20.7670966974278,17.0865965111888,21.9957672621543,21.8580500218374,28.9773711351184,21.261699056745,29.6428984302311,23.4873492582803,26.6506801343713,22.4403652188612,7.70883304291719,17.7588762699252,22.6078918655879,17.2921154855001,13.1368923941889,8.44571139530319,11.9048555773722,8.1459984050045,12.5393026008841,9.60078132449013,7.82552902062201,8.59343270159095,8.76451229952807,10.9613203163303,6.7985450765073,8.10027000278167,13.0593148935024,14.0474146785103,11.39072685854,18.2665731748151,15.1629451892392,14.5123564891014,17.2605769118489,12.367176595051,7.35374033800057,9.11211583986622,13.8043488350059,10.5903339165299,12.8875577999537,10.6461305953901,11.5062068245506,12.5479620009642,12.4849047189495,13.2675933287467,11.4310485907938,10.8931266388164,12.1532808892134,14.4230065281157,11.0399190100798,12.343293085875,14.0205886865877,11.6833733074187,10.7556348307923,14.3046258231303,13.7921810863433,13.5366699925852,9.99664903463803,11.9507620184358,17.3954104213899,12.3380418849141,12.5100692616966,14.3230865109391,11.9301367713194,11.9602098808308,10.7418548513317,11.6965804222704,8.80971321598023,8.22539827896026,6.83833399270498,9.50658126043728 | |phase1_expression=12.6517589212787,10.4692622291808,5.91499011206397,12.0985684522732,9.01612313903425,9.56911849897772,9.34450562382103,16.9151553708465,42.0958279233484,26.2152269480633,34.4148116133265,37.8120033637895,21.9136934311943,21.1557373853974,19.3203661853084,23.8920815519995,20.9868563438444,22.8710069884722,22.8981104121584,19.0975343309114,11.2257142999412,15.7872612409408,18.2839852397255,10.8794847499517,9.63518980482114,5.16808767703518,11.630573896295,10.5580904016086,10.0712412311878,12.8535366177565,10.8647950221099,12.7006134691926,20.9122027778754,31.6963362030877,15.5979874665688,14.4624141461888,16.3335485009895,8.78916424547506,11.720030167857,11.5175223674236,8.82347232046521,8.19654581950135,10.6812277666854,10.3235390739973,7.40051597902456,9.9115246167308,4.69434806608824,5.23260375313072,2.63623419281366,5.44403717407994,7.97922603264566,0,21.9795213935635,21.035502118329,21.5100031451177,8.48956138918625,8.5960031981627,7.21940929188419,9.5088736604011,7.40587370980846,14.5781222806421,3.38844532069132,5.33576877666684,3.1496490104849,3.9554654502679,2.1314403448383,2.39680088414724,1.92109152660777,15.0349937847293,10.6654691282036,12.4091727197315,6.28432165688368,6.84692476950002,16.4137670948038,16.9646483702278,11.9498442259303,6.60695285996332,9.19348834213351,7.68032666281217,12.7929699098288,14.9124859071928,10.939180781692,7.81712397203867,7.87867654044352,8.40390362772456,7.07108605136802,9.681274294339,12.3023634244698,16.2811315666346,15.6433129421046,12.7540375028738,14.6272059086836,6.11974200336975,3.2382191498269,8.4470934268197,8.06448396775204,12.3591089715942,14.827438064291,14.2882302531578,10.6001872353102,8.59144860637751,10.2661181931454,12.7402619853323,0,12.123498296628,9.37431502257865,6.57181778519218,9.24889425724386,17.6077760880077,9.20341262201914,11.6235168933311,10.9607572192371,10.6083128737787,9.3448037142626,12.346814249249,7.28866229712118,12.1125534189843,10.5557530551536,22.9998743506967,15.0443170451091,14.1338571814652,19.3950101254089,13.0474232852686,18.737971008739,19.6879904404648,12.2619386500124,12.8202183221335,9.59844369589452,12.4528822531603,12.1330417917906,10.0650132620098,15.0785222535437,10.9509321721134,10.9957646652042,7.68815764870372,11.6813709408785,12.7299204812895,12.4406970610093,7.83440551144392,11.5743020737561,19.9084277732937,14.4838325793088,16.9258402017028,17.7831685046144,15.6483948048054,16.5266699167456,17.4285207681096,12.1590584247337,21.5567992932842,19.6670323374532,18.6508191613786,16.2204841996405,14.7365042089567,13.5818344943645,13.7874031393322,17.3159812132089,17.5553296828309,13.8967869841946,10.7982129770325,14.2916783049496,12.6644072389792,16.7457717158744,15.1516630774535,15.3476100762975,15.5809784016252,12.7893669612724,10.7309360559848,10.9759421825139,13.6584675428189,18.3867559768587,11.9981838127866,11.1111990443253,12.5143565715899,9.79706856950714,15.3511662451813,15.3327872445134,12.5559137533843,10.8424732332053,17.4896365438892,17.1855137176724,17.912577123771,15.7313149206207,15.5664630691409,11.7939888189787,10.4396393539793,12.8465184684728,15.3314477368164,15.7175612912509,12.6726656627428,20.6728463990471,12.3198688428576,15.9313018603494,15.7424357791058,15.994791765362,20.2873924211545,11.8117770150282,11.8311017172252,12.2036326609154,10.9399209224965,10.0374900626129,10.8329122210549,9.00799296629144,12.1545577105731,24.0256952231175,16.7075145846223,22.2613491261005,19.6774317746848,15.9176925436595,14.0044218479781,16.686375972147,10.2145192868272,10.7078951143352,18.6898668485561,9.30352369171258,9.98520553966594,9.09283960609602,8.96987067609561,6.27176577772377,11.4546977903295,12.127450353311,21.6743418667894,14.2585872051158,14.5507953938871,12.730475565578,10.7119638398706,11.3177515757523,11.3497303756458,14.3952048271704,16.4238411717212,15.5670148979951,14.3328534948693,13.8863096238251,13.5712155545345,13.053736411649,9.83528546038072,8.82997588175144,9.63303539926752,9.02529986759964,8.6885521049638,5.80683132570058,9.14973836307144,7.80877488593277,9.47862950024315,11.2315335037699,11.1399337041197,7.35998980050964,9.71545684019746,8.47541987942804,12.2539211163422,19.2792789853084,9.36804562374573,13.8891170860459,14.3340524231147,12.3727592229402,10.619611067197,14.3240575331439,11.7906187216253,14.5225911412042,13.2885851796348,14.7568871013085,12.4045580720746,12.3601468022352,12.4774082434652,12.6414703174326,11.5960469432499,8.25084345985495,19.4050575279659,14.5849486165361,11.1248468053169,15.6466035573062,13.3005175231705,13.7343989553594,14.1512157717824,12.7875278628132,16.192347856396,12.921756322693,7.93902232997863,10.7176064411962,10.172258881842,19.3001359770099,15.8765217524172,12.6388492803697,15.1570035047522,5.7481843623258,18.2831842453702,13.6215332855727,16.4823129359043,20.720530270516,23.1013244848533,19.2173665493479,15.4680371294408,11.8958734475109,12.0233977209849,8.59203556213602,20.7200075795644,17.0788352386553,14.688726351765,11.2907679847813,10.2630404960703,14.5653494095606,11.4061768900964,7.59092231753686,8.68420321055012,9.94142900939081,18.6018669765783,17.9419855252775,15.0567226315959,18.6673140810286,16.6616172286273,17.2335248000594,12.7919390123872,19.5306577265925,20.7621501962907,26.5742532908607,20.1621004380506,15.1685337901526,14.5962155008918,15.5093545318889,16.6298653411578,20.7670966974278,17.0865965111888,21.9957672621543,21.8580500218374,28.9773711351184,21.261699056745,29.6428984302311,23.4873492582803,26.6506801343713,22.4403652188612,7.70883304291719,17.7588762699252,22.6078918655879,17.2921154855001,13.1368923941889,8.44571139530319,11.9048555773722,8.1459984050045,12.5393026008841,9.60078132449013,7.82552902062201,8.59343270159095,8.76451229952807,10.9613203163303,6.7985450765073,8.10027000278167,13.0593148935024,14.0474146785103,11.39072685854,18.2665731748151,15.1629451892392,14.5123564891014,17.2605769118489,12.367176595051,7.35374033800057,9.11211583986622,13.8043488350059,10.5903339165299,12.8875577999537,10.6461305953901,11.5062068245506,12.5479620009642,12.4849047189495,13.2675933287467,11.4310485907938,10.8931266388164,12.1532808892134,14.4230065281157,11.0399190100798,12.343293085875,14.0205886865877,11.6833733074187,10.7556348307923,14.3046258231303,13.7921810863433,13.5366699925852,9.99664903463803,11.9507620184358,17.3954104213899,12.3380418849141,12.5100692616966,14.3230865109391,11.9301367713194,11.9602098808308,10.7418548513317,11.6965804222704,8.80971321598023,8.22539827896026,6.83833399270498,9.50658126043728 | ||
|short_description=p1@Prpf3 | |||
}} | }} |
Latest revision as of 23:56, 25 September 2015
Short description: | p1@Prpf3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Prpf3_5end |
Coexpression cluster: | MCL_coexpression_mm9:1134 |
Association with transcript: | 0bp_to_ENSMUST00000161073, uc008qlg.1_5end |
EntrezGene: | Prpf3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic lineage restricted progenitor cell | 1.47e-08 | 25 |
lymphocyte | 7.20e-08 | 13 |
common lymphoid progenitor | 7.20e-08 | 13 |
hematopoietic cell | 1.10e-07 | 32 |
hematopoietic oligopotent progenitor cell | 1.10e-07 | 32 |
hematopoietic stem cell | 1.10e-07 | 32 |
hematopoietic multipotent progenitor cell | 1.10e-07 | 32 |
lymphoid lineage restricted progenitor cell | 1.44e-07 | 12 |
T cell | 5.34e-07 | 11 |
pro-T cell | 5.34e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
hemopoietic organ | 1.28e-10 | 29 |
immune organ | 1.28e-10 | 29 |
anterior region of body | 5.30e-09 | 43 |
primordium | 5.85e-09 | 134 |
mixed endoderm/mesoderm-derived structure | 1.04e-08 | 35 |
thymus | 1.31e-08 | 23 |
neck | 1.31e-08 | 23 |
respiratory system epithelium | 1.31e-08 | 23 |
hemolymphoid system gland | 1.31e-08 | 23 |
pharyngeal epithelium | 1.31e-08 | 23 |
thymic region | 1.31e-08 | 23 |
pharyngeal gland | 1.31e-08 | 23 |
entire pharyngeal arch endoderm | 1.31e-08 | 23 |
thymus primordium | 1.31e-08 | 23 |
early pharyngeal endoderm | 1.31e-08 | 23 |
hematopoietic system | 1.89e-08 | 45 |
blood island | 1.89e-08 | 45 |
hemolymphoid system | 6.08e-08 | 48 |
immune system | 6.08e-08 | 48 |
gland of gut | 6.89e-08 | 24 |
pharynx | 1.24e-07 | 24 |
upper respiratory tract | 1.24e-07 | 24 |
chordate pharynx | 1.24e-07 | 24 |
pharyngeal arch system | 1.24e-07 | 24 |
pharyngeal region of foregut | 1.24e-07 | 24 |
craniocervical region | 1.90e-07 | 36 |